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GO:0030528 transcription regulator activity

This term is obsolete.
This term was obsoleted because it is essentially identical to a Process term (specifically the Biological Process term which has been selected as a term to consider for reannotation), i.e. it is defined only in terms of the process it acts in and it does NOT convey any information about the molecular nature of the function or whether the function is based on binding DNA, on interacting with other proteins, or some other mechanism. To transfer all annotations without review, the BP term indicated is considered to be equivalent and thus the only appropriate destination for all annotations. To reannotate to a MF term, you will probably need to revisit the original literature or other primary data because this "MF" term was not defined in terms of mechanism of action and there are multiple possibilities in the revised MF structure. In reannotation, please also consider descendent terms of the suggested MF terms as a more specific term may be more appropriate than the MF terms indicated. Please be aware that you may wish to request a new term if the mechanism of action of this gene product is not yet represented or if you are annotating for an RNAP different than one for which there is a specific suggested term. Also note that if there is no information about how the gene product acts, it may be appropriate to annotate to the root term for molecular_function.

Term Information

ID GO:0030528
Name transcription regulator activity
Ontology Molecular Function
Definition OBSOLETE. Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor.
Comment This term was obsoleted because it is essentially identical to a Process term (specifically the Biological Process term which has been selected as a term to consider for reannotation), i.e. it is defined only in terms of the process it acts in and it does NOT convey any information about the molecular nature of the function or whether the function is based on binding DNA, on interacting with other proteins, or some other mechanism. To transfer all annotations without review, the BP term indicated is considered to be equivalent and thus the only appropriate destination for all annotations. To reannotate to a MF term, you will probably need to revisit the original literature or other primary data because this "MF" term was not defined in terms of mechanism of action and there are multiple possibilities in the revised MF structure. In reannotation, please also consider descendent terms of the suggested MF terms as a more specific term may be more appropriate than the MF terms indicated. Please be aware that you may wish to request a new term if the mechanism of action of this gene product is not yet represented or if you are annotating for an RNAP different than one for which there is a specific suggested term. Also note that if there is no information about how the gene product acts, it may be appropriate to annotate to the root term for molecular_function.
GONUTS GO:0030528 Wiki Page

Synonyms

Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope. Click on the icon for more details.
Type Synonym
exact transcriptional regulator activity

GO Slims

This term is present in the following GO Consortium-maintained GO slims:
GO slim nameCount of all terms
goslim_pir462
goslim_plant100

Replaced by

This term is obsolete - try one of these terms:
Advice GO Identifier Ontology GO Term Name
Consider GO:0000988 Molecular Function protein binding transcription factor activity
Consider GO:0001071 Molecular Function nucleic acid binding transcription factor activity
Consider GO:0006351 Biological Process transcription, DNA-templated

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Child Terms

This table lists all terms that are direct descendants (child terms) of GO:0030528:
Term has no children

Protein Annotation

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Co-occurring Terms

These tables show the number of times the term listed in the table has been co-annotated with GO:0030528. The terms are listed in descending order of number of times the term has been co-annotated.
The table on the left is calculated using both electronic and manual-evidenced annotations, while the table on the right is calculated using only manual-evidenced annotations.
Co-occurrence statistics for GO:0030528 based on the entire annotation set Co-occurrence statistics for GO:0030528 based on non-IEA annotations only

Change Log

All changes

Timestamp Action Category Detail
2013-04-18 Updated SLIM goslim_plant
2013-04-18 Updated SLIM goslim_pir
2011-11-05 Deleted SLIM goslim_candida
2011-08-14 Deleted SLIM goslim_yeast
2011-05-16 Added OBSOLETION consider GO:0000988 (protein binding transcription factor activity)
2011-05-16 Added OBSOLETION consider GO:0001071 (nucleic acid binding transcription factor activity)
2011-05-16 Added OBSOLETION consider GO:0006351 (transcription, DNA-templated)
2011-05-16 Added DEFINITION OBSOLETE. Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor.
2011-05-16 Deleted RELATION is a GO:0003674 (molecular_function)
2011-05-16 Updated TERM transcription regulator activity
2011-05-16 Deleted DEFINITION Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor.
2011-03-18 Deleted RELATION part of GO:0045449 (regulation of transcription)
2011-03-18 Deleted SLIM goslim_goa
2010-12-05 Deleted SLIM goslim_generic
2010-06-15 Added RELATION part of GO:0045449 (regulation of transcription)
2010-06-14 Deleted RELATION part of GO:0045449 (regulation of transcription)
2010-06-08 Added RELATION part of GO:0045449 (regulation of transcription)
2008-06-09 Added SLIM goslim_generic
2008-06-09 Added SLIM goslim_candida
2008-06-09 Added SLIM goslim_yeast
2008-06-09 Added SLIM goslim_plant
2008-06-09 Added SLIM goslim_pir
2008-06-09 Added SLIM goslim_goa
2008-05-13 Added DEFINITION Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor.
2008-05-12 Deleted DEFINITION Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor.
2008-04-01 Updated RELATION is a GO:0003674 (molecular_function)
2007-08-09 Added SYNONYM transcriptional regulator activity
2007-08-09 Deleted SYNONYM transcriptional regulator activity
2007-07-22 Added SYNONYM transcriptional regulator activity
2007-06-27 Deleted SYNONYM <new synonym>
2007-06-17 Added SYNONYM <new synonym>
2003-03-19 Updated TERM transcription regulator activity
2002-11-27 Added DEFINITION Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor.
2002-02-06 Updated TERM transcription regulator
2002-01-28 Added TERM transcription regulator

Term

Timestamp Action Category Detail
2011-05-16 Updated TERM transcription regulator activity
2003-03-19 Updated TERM transcription regulator activity
2002-02-06 Updated TERM transcription regulator
2002-01-28 Added TERM transcription regulator

Obsoletions

Timestamp Action Category Detail
2011-05-16 Added OBSOLETION consider GO:0000988 (protein binding transcription factor activity)
2011-05-16 Added OBSOLETION consider GO:0001071 (nucleic acid binding transcription factor activity)
2011-05-16 Added OBSOLETION consider GO:0006351 (transcription, DNA-templated)

Definition/synonyms

Timestamp Action Category Detail
2011-05-16 Added DEFINITION OBSOLETE. Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor.
2011-05-16 Deleted DEFINITION Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor.
2008-05-13 Added DEFINITION Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor.
2008-05-12 Deleted DEFINITION Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor.
2007-08-09 Added SYNONYM transcriptional regulator activity
2007-08-09 Deleted SYNONYM transcriptional regulator activity
2007-07-22 Added SYNONYM transcriptional regulator activity
2007-06-27 Deleted SYNONYM <new synonym>
2007-06-17 Added SYNONYM <new synonym>
2002-11-27 Added DEFINITION Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor.

Relationships

Timestamp Action Category Detail
2011-05-16 Deleted RELATION is a GO:0003674 (molecular_function)
2011-03-18 Deleted RELATION part of GO:0045449 (regulation of transcription)
2010-06-15 Added RELATION part of GO:0045449 (regulation of transcription)
2010-06-14 Deleted RELATION part of GO:0045449 (regulation of transcription)
2010-06-08 Added RELATION part of GO:0045449 (regulation of transcription)
2008-04-01 Updated RELATION is a GO:0003674 (molecular_function)

Other

Timestamp Action Category Detail
2013-04-18 Updated SLIM goslim_plant
2013-04-18 Updated SLIM goslim_pir
2011-11-05 Deleted SLIM goslim_candida
2011-08-14 Deleted SLIM goslim_yeast
2011-03-18 Deleted SLIM goslim_goa
2010-12-05 Deleted SLIM goslim_generic
2008-06-09 Added SLIM goslim_generic
2008-06-09 Added SLIM goslim_candida
2008-06-09 Added SLIM goslim_yeast
2008-06-09 Added SLIM goslim_plant
2008-06-09 Added SLIM goslim_pir
2008-06-09 Added SLIM goslim_goa
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