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GO:0019843 rRNA binding

Term Information

ID GO:0019843
Name rRNA binding
Ontology Molecular Function
Definition Interacting selectively and non-covalently with ribosomal RNA.
GONUTS GO:0019843 Wiki Page

Annotation Guidance

Usage of this term is subject to the following annotation guidelines:
Annotation Guidelines
Binding term considerationsLink

GO Slims

This term is present in the following GO Consortium-maintained GO slims:
GO slim nameCount of all terms
goslim_generic149
goslim_yeast169

Cross-Ontology Relations

Relation Other Ontology ID Term
has_input CHEBI CHEBI:18111 ribosomal RNA

Cross-references

Database ID
InterPro IPR000114
InterPro IPR000529
InterPro IPR000702
InterPro IPR001912
InterPro IPR005813
InterPro IPR018079
InterPro IPR019906
InterPro IPR019907
InterPro IPR019970
InterPro IPR020040
InterPro IPR020526
InterPro IPR020814
InterPro IPR020815
InterPro IPR022802
UniProtKB-KW rRNA-binding

Ancestor Chart

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Child Terms

This table lists all terms that are direct descendants (child terms) of GO:0019843:
Relationship To GO:0019843 Child Term Child Term Name
Is a GO:0042134 rRNA primary transcript binding
Is a GO:0008097 5S rRNA binding
Is a GO:0070180 large ribosomal subunit rRNA binding
Is a GO:0070181 small ribosomal subunit rRNA binding
Is a GO:0000944 base pairing with rRNA

Protein Annotation

Displaying annotations FIRST to LAST of TOTAL Page size: Additional filters: Bookmarkable link
Database
Gene Product ID
Symbol
Qualifier
GO Identifier
GO Term Name
Aspect
Original GO ID
Original GO Term Name
Evidence
Reference
With
Taxon
Date
Assigned By
Product Form ID
Name
Synonym
Type
Taxon Name
Sequence

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Co-occurring Terms

These tables show the number of times the term listed in the table has been co-annotated with GO:0019843. The terms are listed in descending order of number of times the term has been co-annotated.
The table on the left is calculated using both electronic and manual-evidenced annotations, while the table on the right is calculated using only manual-evidenced annotations.
Co-occurrence statistics for GO:0019843 based on the entire annotation set Co-occurrence statistics for GO:0019843 based on non-IEA annotations only

Change Log

All changes

Timestamp Action Category Detail
2013-04-18 Updated SLIM goslim_yeast
2013-04-18 Updated SLIM goslim_generic
2012-02-10 Added SLIM goslim_generic
2011-08-14 Added SLIM goslim_yeast
2009-07-03 Deleted DEFINITION Interacting selectively with ribosomal RNA.
2009-07-03 Added DEFINITION Interacting selectively and non-covalently with ribosomal RNA.
2008-05-13 Added DEFINITION Interacting selectively with ribosomal RNA.
2008-05-12 Deleted DEFINITION Interacting selectively with ribosomal RNA.
2008-04-01 Updated RELATION is a GO:0003723 (RNA binding)
2003-06-10 Updated TERM rRNA binding
2003-03-26 Added DEFINITION Interacting selectively with ribosomal RNA.
2003-03-19 Updated TERM rRNA binding activity
2001-12-10 Added TERM rRNA binding

Term

Timestamp Action Category Detail
2003-06-10 Updated TERM rRNA binding
2003-03-19 Updated TERM rRNA binding activity
2001-12-10 Added TERM rRNA binding

Definition/synonyms

Timestamp Action Category Detail
2009-07-03 Deleted DEFINITION Interacting selectively with ribosomal RNA.
2009-07-03 Added DEFINITION Interacting selectively and non-covalently with ribosomal RNA.
2008-05-13 Added DEFINITION Interacting selectively with ribosomal RNA.
2008-05-12 Deleted DEFINITION Interacting selectively with ribosomal RNA.
2003-03-26 Added DEFINITION Interacting selectively with ribosomal RNA.

Relationships

Timestamp Action Category Detail
2008-04-01 Updated RELATION is a GO:0003723 (RNA binding)

Other

Timestamp Action Category Detail
2013-04-18 Updated SLIM goslim_yeast
2013-04-18 Updated SLIM goslim_generic
2012-02-10 Added SLIM goslim_generic
2011-08-14 Added SLIM goslim_yeast
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