spacer
spacer
Type a query for QuickGO...
You can reach the search box using alt+9 (Win/IE), alt+shift+9 (Win/Firefox) or ctrl+9 (Mac)
EBIDatabasesQuickGO

GO:0018298 protein-chromophore linkage

The covalent or noncovalent linking of a chromophore to a protein.

Term Information

ID GO:0018298
Name protein-chromophore linkage
Ontology Biological Process
Definition The covalent or noncovalent linking of a chromophore to a protein.
Comment

Cross-references associated with this term:

Database ID
INTERPRO IPR003376
INTERPRO IPR013654
INTERPRO IPR009017
INTERPRO IPR013516
INTERPRO IPR012130
INTERPRO IPR016132
INTERPRO IPR013515

Web service: term information

Use this URI template to access this data as a service:

GTerm?id=termID&format=format

Full details can be found on the QuickGO Web Services page.

Ancestor Chart

Visual display of a section of the GO directed acyclic graph (DAG) for a single GO term. Terms in the GO are linked to parent (more general) terms and often to child (more specific) terms by one or more 'relationships'

All GO terms displayed in this graph can be clicked to display term definitions and child (descendent) terms.

Chart

Ancestor Table

Alternative display of a section of the GO, providing a concise view of the relationships connecting GO terms

All GO terms displayed in this chart can be right-clicked to display term definitions and child (descendent) terms.

GO:0008150 biological_process
GO:0009987 cellular process
GO:0008152 metabolic process
GO:0043170 macromolecule metabolic process
GO:0044238 primary metabolic process
GO:0043283 biopolymer metabolic process
GO:0044237 cellular metabolic process
GO:0043412 biopolymer modification
GO:0019538 protein metabolic process
GO:0044260 cellular macromolecule metabolic process
GO:0034960 cellular biopolymer metabolic process
GO:0044267 cellular protein metabolic process
GO:0006464 protein modification process
GO:0043687 post-translational protein modification
GO:0018298 protein-chromophore linkage

Relationship key

Code Relationship
part of
is a
regulates
+ve regulates
-ve regulates

Child Terms

All direct descendants (child terms) available for this GO term:
I GO:0019922 protein-chromophore linkage via peptidyl-cysteine
I GO:0019931 protein-chromophore linkage via peptidyl-N6-3-dehydroretinal-L-lysine
I GO:0051357 peptide cross-linking via 3-(2-methylthio)ethyl-6-(4-hydroxybenzylidene)-5-iminopiperazin-2-one
I GO:0051358 peptide cross-linking via 2-imino-glutamic acid 5-imidazolinone glycine
I GO:0051359 peptide cross-linking via 2-imino-methionine 5-imidazolinone glycine
I GO:0051360 peptide cross-linking via L-asparagine 5-imidazolinone glycine
I GO:0051361 peptide cross-linking via L-lysine 5-imidazolinone glycine
I GO:0051362 peptide cross-linking via 2-tetrahydropyridinyl-5-imidazolinone glycine
I GO:0018097 protein-chromophore linkage via peptidyl-S-4-hydroxycinnamyl-L-cysteine
I GO:0018273 protein-chromophore linkage via peptidyl-N6-retinal-L-lysine
I GO:0018252 peptide cross-linking via L-seryl-5-imidazolinone glycine
I GO:0019729 peptide cross-linking via 2-imino-glutaminyl-5-imidazolinone glycine

Relationship key

CodeRelationship
Ppart of
Iis a

Protein Annotation

DB
ID
Qualifier colocalizes_with contributes_to NOT NOT|colocalizes_with NOT|contributes_to
GO Term
Reference
Evidence IMP IGI IPI IGC ISS IDA IEP IEA TAS NAS ND IC RCA ISA EXP
With
Taxonomy
From
Download limit
Format

Co-occurring Terms

Co-occurrence statistics

This display shows those GO terms which have been annotated to the same proteins as this term.
Terms may have been co-annotated either by electronic (IEA) or manual annotation methods. Users can decide which evidence code type should be used in the calculation of the co-occurence statistics.
Click on the 'Update' button to run the co-occurence calculation
IMP IGI IPI IGC ISS IDA IEP IEA TAS NAS ND IC RCA ISA EXP Statistics may take up to 1 minute to calculate
spacer
13ms
Stand-alone
Hostnametomcat-7.ebi.ac.uk
Uptime16:38 12/10/2009
Data version2009-11-22-04-02-35
Terminal
spacer