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GO:0010395 rhamnogalacturonan I metabolic process

Term Information

ID GO:0010395
Name rhamnogalacturonan I metabolic process
Ontology Biological Process
Definition The chemical reactions and pathways involving rhamnogalacturonan I (RGI), a branched pectin with a backbone of alternating alpha-(1->2)-linked rhamnose and alpha-(1->4)-linked D-galacturonic acid residues that carries neutral side-chains of predominantly beta-(1->4)-D-galactose and/or alpha-(1->5)-L-arabinose residues attached to the rhamnose residues of the RGI backbone.
GONUTS GO:0010395 Wiki Page

Synonyms

Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope. Click on the icon for more details.
Type Synonym
exact rhamnogalacturonan I metabolism
related RGI metabolism

Taxon Constraints

The use of this term should conform to the following taxon constraints:
Taxon Rule Ancestor GO ID Ancestor GO Term Name Relationship Taxon ID Taxon Reference(s)
GOTAX:0000162 GO:0009664 plant-type cell wall organization only_in_taxon 33090 Viridiplantae
GOTAX:0000438 GO:0052546 cell wall pectin metabolic process only_in_taxon 33090 Viridiplantae
More information on taxon constraints in GO is available here

Cross-Ontology Relations

Relation Other Ontology ID Term
has_participant CHEBI CHEBI:60174 rhamnogalacturonan I

Ancestor Chart

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Child Terms

This table lists all terms that are direct descendants (child terms) of GO:0010395:
Relationship To GO:0010395 Child Term Child Term Name
Is a GO:0010399 rhamnogalacturonan I backbone metabolic process
Is a GO:0010400 rhamnogalacturonan I side chain metabolic process
Is a GO:0010246 rhamnogalacturonan I biosynthetic process

Protein Annotation

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GO Term Name
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Original GO Term Name
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Co-occurring Terms

These tables show the number of times the term listed in the table has been co-annotated with GO:0010395. The terms are listed in descending order of number of times the term has been co-annotated.
The table on the left is calculated using both electronic and manual-evidenced annotations, while the table on the right is calculated using only manual-evidenced annotations.
Co-occurrence statistics for GO:0010395 based on the entire annotation set Co-occurrence statistics for GO:0010395 based on non-IEA annotations only

Change Log

All changes

Timestamp Action Category Detail
2012-12-21 Added RELATION is a GO:0044036 (cell wall macromolecule metabolic process)
2012-11-17 Deleted RELATION is a GO:0010382 (cellular cell wall macromolecule metabolic process)
2012-11-02 Deleted RELATION is a GO:0010393 (galacturonan metabolic process)
2012-05-12 Added RELATION is a GO:0010393 (galacturonan metabolic process)
2009-06-21 Added RELATION is a GO:0044264 (cellular polysaccharide metabolic process)
2009-02-09 Added RELATION is a GO:0010382 (cellular cell wall macromolecule metabolic process)
2008-05-13 Added DEFINITION The chemical reactions and pathways involving rhamnogalacturonan I (RGI), a branched pectin with a backbone of alternating alpha-(1->2)-linked rhamnose and alpha-(1->4)-linked D-galacturonic acid residues that carries neutral side-chains of predominantly beta-(1->4)-D-galactose and/or alpha-(1->5)-L-arabinose residues attached to the rhamnose residues of the RGI backbone.
2008-05-12 Deleted DEFINITION The chemical reactions and pathways involving rhamnogalacturonan I (RGI), a branched pectin with a backbone of alternating alpha-(1->2)-linked rhamnose and alpha-(1->4)-linked D-galacturonic acid residues that carries neutral side-chains of predominantly beta-(1->4)-D-galactose and/or alpha-(1->5)-L-arabinose residues attached to the rhamnose residues of the RGI backbone.
2008-04-01 Updated RELATION is a GO:0052546 (cell wall pectin metabolic process)
2007-08-09 Added SYNONYM RGI metabolism
2007-08-09 Added SYNONYM rhamnogalacturonan I metabolism
2007-08-09 Deleted SYNONYM RGI metabolism
2007-08-09 Deleted SYNONYM rhamnogalacturonan I metabolism
2007-04-20 Added DEFINITION The chemical reactions and pathways involving rhamnogalacturonan I (RGI), a branched pectin with a backbone of alternating alpha-(1->2)-linked rhamnose and alpha-(1->4)-linked D-galacturonic acid residues that carries neutral side-chains of predominantly beta-(1->4)-D-galactose and/or alpha-(1->5)-L-arabinose residues attached to the rhamnose residues of the RGI backbone.
2007-04-16 Added SYNONYM RGI metabolism
2007-04-16 Added SYNONYM rhamnogalacturonan I metabolism
2007-04-16 Added TERM rhamnogalacturonan I metabolic process

Term

Timestamp Action Category Detail
2007-04-16 Added TERM rhamnogalacturonan I metabolic process

Definition/synonyms

Timestamp Action Category Detail
2008-05-13 Added DEFINITION The chemical reactions and pathways involving rhamnogalacturonan I (RGI), a branched pectin with a backbone of alternating alpha-(1->2)-linked rhamnose and alpha-(1->4)-linked D-galacturonic acid residues that carries neutral side-chains of predominantly beta-(1->4)-D-galactose and/or alpha-(1->5)-L-arabinose residues attached to the rhamnose residues of the RGI backbone.
2008-05-12 Deleted DEFINITION The chemical reactions and pathways involving rhamnogalacturonan I (RGI), a branched pectin with a backbone of alternating alpha-(1->2)-linked rhamnose and alpha-(1->4)-linked D-galacturonic acid residues that carries neutral side-chains of predominantly beta-(1->4)-D-galactose and/or alpha-(1->5)-L-arabinose residues attached to the rhamnose residues of the RGI backbone.
2007-08-09 Added SYNONYM RGI metabolism
2007-08-09 Added SYNONYM rhamnogalacturonan I metabolism
2007-08-09 Deleted SYNONYM RGI metabolism
2007-08-09 Deleted SYNONYM rhamnogalacturonan I metabolism
2007-04-20 Added DEFINITION The chemical reactions and pathways involving rhamnogalacturonan I (RGI), a branched pectin with a backbone of alternating alpha-(1->2)-linked rhamnose and alpha-(1->4)-linked D-galacturonic acid residues that carries neutral side-chains of predominantly beta-(1->4)-D-galactose and/or alpha-(1->5)-L-arabinose residues attached to the rhamnose residues of the RGI backbone.
2007-04-16 Added SYNONYM RGI metabolism
2007-04-16 Added SYNONYM rhamnogalacturonan I metabolism

Relationships

Timestamp Action Category Detail
2012-12-21 Added RELATION is a GO:0044036 (cell wall macromolecule metabolic process)
2012-11-17 Deleted RELATION is a GO:0010382 (cellular cell wall macromolecule metabolic process)
2012-11-02 Deleted RELATION is a GO:0010393 (galacturonan metabolic process)
2012-05-12 Added RELATION is a GO:0010393 (galacturonan metabolic process)
2009-06-21 Added RELATION is a GO:0044264 (cellular polysaccharide metabolic process)
2009-02-09 Added RELATION is a GO:0010382 (cellular cell wall macromolecule metabolic process)
2008-04-01 Updated RELATION is a GO:0052546 (cell wall pectin metabolic process)
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