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GO:0009982 pseudouridine synthase activity

Term Information

ID GO:0009982
Name pseudouridine synthase activity
Ontology Molecular Function
Definition Catalysis of the reaction: RNA uridine = RNA pseudouridine. Conversion of uridine in an RNA molecule to pseudouridine by rotation of the C1'-N-1 glycosidic bond of uridine in RNA to a C1'-C5.
Comment Note that this term should not be confused with 'pseudouridylate synthase activity ; GO:0004730', which refers to the formation of free pseudouridine from uracil and ribose-5-phosphate.
Secondary IDs GO:0016439
GONUTS GO:0009982 Wiki Page

Synonyms

Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope. Click on the icon for more details.
Type Synonym
narrow tRNA-pseudouridine synthase I activity
narrow tRNA-uridine isomerase activity
narrow tRNA-uridine uracilmutase activity
narrow transfer RNA pseudouridine synthetase activity
narrow transfer ribonucleate pseudouridine synthetase activity
narrow tRNA pseudouridylate synthase I activity
narrow tRNA-pseudouridine synthase activity

Annotation Guidance

Usage of this term is subject to the following annotation guidelines:
Annotation Guidelines
Annotating to catalytic activities using the IPI evidence codeLink
Describing enzyme functions that catalyse multi-stage reactionsLink

Cross-references

Database ID
EC 5.4.99.12
InterPro IPR001406
InterPro IPR001656
InterPro IPR005912
InterPro IPR006145
InterPro IPR006224
InterPro IPR006225
InterPro IPR011760
InterPro IPR014780
InterPro IPR015225
InterPro IPR015240
InterPro IPR017091
InterPro IPR020094
InterPro IPR020095
InterPro IPR020097
InterPro IPR020103
InterPro IPR020119
MetaCyc TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN

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Child Terms

This table lists all terms that are direct descendants (child terms) of GO:0009982:
Term has no children

Protein Annotation

Displaying annotations FIRST to LAST of TOTAL Page size: Additional filters: Bookmarkable link
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GO Term Name
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Co-occurring Terms

These tables show the number of times the term listed in the table has been co-annotated with GO:0009982. The terms are listed in descending order of number of times the term has been co-annotated.
The table on the left is calculated using both electronic and manual-evidenced annotations, while the table on the right is calculated using only manual-evidenced annotations.
Co-occurrence statistics for GO:0009982 based on the entire annotation set Co-occurrence statistics for GO:0009982 based on non-IEA annotations only

Change Log

All changes

Timestamp Action Category Detail
2008-07-07 Added SYNONYM tRNA pseudouridylate synthase I activity
2008-07-07 Added SYNONYM tRNA-pseudouridine synthase I activity
2008-07-07 Added SYNONYM tRNA-pseudouridine synthase activity
2008-07-07 Added SYNONYM tRNA-uridine isomerase activity
2008-07-07 Added SYNONYM tRNA-uridine uracilmutase activity
2008-07-07 Added SYNONYM transfer RNA pseudouridine synthetase activity
2008-07-07 Added SYNONYM transfer ribonucleate pseudouridine synthetase activity
2008-07-07 Added XREF MetaCyc:TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN
2008-07-07 Added XREF EC:5.4.99.12
2008-07-07 Deleted XREF EC:5.4.99.-
2008-07-07 Added SECONDARY GO:0016439 (tRNA-pseudouridine synthase activity)
2008-05-13 Added DEFINITION Catalysis of the reaction: RNA uridine = RNA pseudouridine. Conversion of uridine in an RNA molecule to pseudouridine by rotation of the C1'-N-1 glycosidic bond of uridine in RNA to a C1'-C5.
2008-05-12 Deleted DEFINITION Catalysis of the reaction: RNA uridine = RNA pseudouridine. Conversion of uridine in an RNA molecule to pseudouridine by rotation of the C1'-N-1 glycosidic bond of uridine in RNA to a C1'-C5.
2008-04-01 Updated RELATION is a GO:0016866 (intramolecular transferase activity)
2005-01-11 Added DEFINITION Catalysis of the reaction: RNA uridine = RNA pseudouridine. Conversion of uridine in an RNA molecule to pseudouridine by rotation of the C1'-N-1 glycosidic bond of uridine in RNA to a C1'-C5.
2005-01-10 Added XREF EC:5.4.99.-
2003-03-19 Updated TERM pseudouridine synthase activity
2003-01-11 Added TERM pseudouridine synthase

Term

Timestamp Action Category Detail
2003-03-19 Updated TERM pseudouridine synthase activity
2003-01-11 Added TERM pseudouridine synthase

Definition/synonyms

Timestamp Action Category Detail
2008-07-07 Added SYNONYM tRNA pseudouridylate synthase I activity
2008-07-07 Added SYNONYM tRNA-pseudouridine synthase I activity
2008-07-07 Added SYNONYM tRNA-pseudouridine synthase activity
2008-07-07 Added SYNONYM tRNA-uridine isomerase activity
2008-07-07 Added SYNONYM tRNA-uridine uracilmutase activity
2008-07-07 Added SYNONYM transfer RNA pseudouridine synthetase activity
2008-07-07 Added SYNONYM transfer ribonucleate pseudouridine synthetase activity
2008-05-13 Added DEFINITION Catalysis of the reaction: RNA uridine = RNA pseudouridine. Conversion of uridine in an RNA molecule to pseudouridine by rotation of the C1'-N-1 glycosidic bond of uridine in RNA to a C1'-C5.
2008-05-12 Deleted DEFINITION Catalysis of the reaction: RNA uridine = RNA pseudouridine. Conversion of uridine in an RNA molecule to pseudouridine by rotation of the C1'-N-1 glycosidic bond of uridine in RNA to a C1'-C5.
2005-01-11 Added DEFINITION Catalysis of the reaction: RNA uridine = RNA pseudouridine. Conversion of uridine in an RNA molecule to pseudouridine by rotation of the C1'-N-1 glycosidic bond of uridine in RNA to a C1'-C5.

Relationships

Timestamp Action Category Detail
2008-04-01 Updated RELATION is a GO:0016866 (intramolecular transferase activity)

Cross-references

Timestamp Action Category Detail
2008-07-07 Added XREF MetaCyc:TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN
2008-07-07 Added XREF EC:5.4.99.12
2008-07-07 Deleted XREF EC:5.4.99.-
2005-01-10 Added XREF EC:5.4.99.-

Other

Timestamp Action Category Detail
2008-07-07 Added SECONDARY GO:0016439 (tRNA-pseudouridine synthase activity)
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