spacer

GO:0009585 red, far-red light phototransduction

Term Information

ID GO:0009585
Name red, far-red light phototransduction
Ontology Biological Process
Definition The sequence of reactions within a cell required to convert absorbed photons from red or far-red light into a molecular signal; the red, far-red light range is defined as having a wavelength within the range 660-730 nm.
GONUTS GO:0009585 Wiki Page

Synonyms

Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope. Click on the icon for more details.
Type Synonym
related red-sensitive opsin
broad phytochrome signaling pathway

GO Discussions

The GO editorial group is intending to improve the information provided in this area of the GO.
If you would like to be involved in discussions regarding this development activity, please email the GO Consortium.
Please note that it is still appropriate to use this term for curation or analysis purposes.
Ontology Development Project
signallingLink

Cross-references

Database ID
InterPro IPR012129
UniProtKB-KW Phytochrome signaling pathway

Replaces

This term can be used instead of these obsolete terms:
GO Identifier GO Term Name Reason
GO:0015061 obsolete red-sensitive opsin CONSIDER GO:0009585

Ancestor Chart

This chart is interactive; you can click on the term boxes and legend for more information.
Display options
Display
Key
GO IDs
Term box width
Term box height
Slim colours
Show children
Image size limit (in megapixels)
Note that setting the limit too high may result in images being generated slowly; it may even cause the browser to crash. The maximum limit is 20 megapixels.

Child Terms

This table lists all terms that are direct descendants (child terms) of GO:0009585:
Relationship To GO:0009585 Child Term Child Term Name
Part of GO:0009883 red or far-red light photoreceptor activity

Protein Annotation

Displaying annotations FIRST to LAST of TOTAL Page size: Additional filters: Bookmarkable link
Database
Gene Product ID
Symbol
Qualifier
GO Identifier
GO Term Name
Aspect
Original GO ID
Original GO Term Name
Evidence
Reference
With
Taxon
Date
Assigned By
Product Form ID
Name
Synonym
Type
Taxon Name
Sequence

Export

Display options

ID Mapping

QuickGO maps between different identifier types by using a combination of mapping files provided by the databases, and using identifier cross-references supplied by UniProtKB.

If more than one identifier type needs to be used to map all required sequences, drag the selected databases to change the order in which identifiers are found.

Filter

Select

Grouped by
Annotation count
Protein count
Both

Co-occurring Terms

These tables show the number of times the term listed in the table has been co-annotated with GO:0009585. The terms are listed in descending order of number of times the term has been co-annotated.
The table on the left is calculated using both electronic and manual-evidenced annotations, while the table on the right is calculated using only manual-evidenced annotations.
Co-occurrence statistics for GO:0009585 based on the entire annotation set Co-occurrence statistics for GO:0009585 based on non-IEA annotations only

Change Log

All changes

Timestamp Action Category Detail
2009-10-27 Added RELATION part of GO:0010017 (red or far-red light signaling pathway)
2008-05-13 Added DEFINITION The sequence of reactions within a cell required to convert absorbed photons from red or far-red light into a molecular signal; the red, far-red light range is defined as having a wavelength within the range 660-730 nm.
2008-05-12 Deleted DEFINITION The sequence of reactions within a cell required to convert absorbed photons from red or far-red light into a molecular signal; the red, far-red light range is defined as having a wavelength within the range 660-730 nm.
2008-04-01 Updated RELATION is a GO:0007602 (phototransduction)
2007-08-09 Added SYNONYM phytochrome signaling pathway
2007-08-09 Added SYNONYM red-sensitive opsin
2007-08-09 Deleted SYNONYM phytochrome signaling pathway
2007-08-09 Deleted SYNONYM red-sensitive opsin
2005-08-10 Added SYNONYM red-sensitive opsin
2005-05-16 Added SYNONYM phytochrome signaling pathway
2005-05-14 Added DEFINITION The sequence of reactions within a cell required to convert absorbed photons from red or far-red light into a molecular signal; the red, far-red light range is defined as having a wavelength within the range 660-730 nm.
2002-04-23 Updated TERM red, far-red light phototransduction
2002-02-06 Updated TERM phytochrome mediated phototransduction
2001-04-03 Updated TERM phytochrome mediated phototransduction
2001-03-30 Added TERM phytochrome mediated phototransduction

Term

Timestamp Action Category Detail
2002-04-23 Updated TERM red, far-red light phototransduction
2002-02-06 Updated TERM phytochrome mediated phototransduction
2001-04-03 Updated TERM phytochrome mediated phototransduction
2001-03-30 Added TERM phytochrome mediated phototransduction

Definition/synonyms

Timestamp Action Category Detail
2008-05-13 Added DEFINITION The sequence of reactions within a cell required to convert absorbed photons from red or far-red light into a molecular signal; the red, far-red light range is defined as having a wavelength within the range 660-730 nm.
2008-05-12 Deleted DEFINITION The sequence of reactions within a cell required to convert absorbed photons from red or far-red light into a molecular signal; the red, far-red light range is defined as having a wavelength within the range 660-730 nm.
2007-08-09 Added SYNONYM phytochrome signaling pathway
2007-08-09 Added SYNONYM red-sensitive opsin
2007-08-09 Deleted SYNONYM phytochrome signaling pathway
2007-08-09 Deleted SYNONYM red-sensitive opsin
2005-08-10 Added SYNONYM red-sensitive opsin
2005-05-16 Added SYNONYM phytochrome signaling pathway
2005-05-14 Added DEFINITION The sequence of reactions within a cell required to convert absorbed photons from red or far-red light into a molecular signal; the red, far-red light range is defined as having a wavelength within the range 660-730 nm.

Relationships

Timestamp Action Category Detail
2009-10-27 Added RELATION part of GO:0010017 (red or far-red light signaling pathway)
2008-04-01 Updated RELATION is a GO:0007602 (phototransduction)
spacer
Please send comments, suggestions or bug reports to goa@ebi.ac.uk. Click here for details of how to cite UniProt-GOA and QuickGO.
15ms