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GO:0006366 transcription from RNA polymerase II promoter

Term Information

ID GO:0006366
Name transcription from RNA polymerase II promoter
Ontology Biological Process
Definition The synthesis of RNA from a DNA template by RNA polymerase II, originating at an RNA polymerase II promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs).
Secondary IDs GO:0032568 GO:0032569
GONUTS GO:0006366 Wiki Page

Synonyms

Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope. Click on the icon for more details.
Type Synonym
related specific transcription from RNA polymerase II promoter
related RNA polymerase II transcription factor activity
related general transcription from RNA polymerase II promoter
related gene-specific transcription from RNA polymerase II promoter
exact transcription from Pol II promoter

Annotation Guidance

Usage of this term is subject to the following annotation guidelines:
Annotation Guidelines
Annotating to transcription processesLink

GO Slims

This term is present in the following GO Consortium-maintained GO slims:
GO slim nameCount of all terms
goslim_yeast169

Cross-references

Database ID
InterPro IPR000684
InterPro IPR003195
InterPro IPR003196
InterPro IPR016743
InterPro IPR027755
InterPro IPR027756
InterPro IPR029138
InterPro IPR031184

Replaces

This term can be used instead of these obsolete terms:
GO Identifier GO Term Name Reason
GO:0003702 obsolete RNA polymerase II transcription factor activity CONSIDER GO:0006366
GO:0003704 obsolete specific RNA polymerase II transcription factor activity CONSIDER GO:0006366
GO:0016251 obsolete general RNA polymerase II transcription factor activity CONSIDER GO:0006366
GO:0016252 obsolete nonspecific RNA polymerase II transcription factor activity CONSIDER GO:0006366

Ancestor Chart

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Child Terms

This table lists all terms that are direct descendants (child terms) of GO:0006366:
Relationship To GO:0006366 Child Term Child Term Name
Part of GO:0001111 promoter clearance from RNA polymerase II promoter
Regulates GO:0006357 regulation of transcription from RNA polymerase II promoter
Is a GO:0042789 mRNA transcription from RNA polymerase II promoter
Is a GO:0042795 snRNA transcription from RNA polymerase II promoter
Part of GO:0006367 transcription initiation from RNA polymerase II promoter
Part of GO:0006368 transcription elongation from RNA polymerase II promoter
Part of GO:0006369 termination of RNA polymerase II transcription
Part of GO:0001055 RNA polymerase II activity
Negatively regulates GO:0000122 negative regulation of transcription from RNA polymerase II promoter
Positively regulates GO:0045944 positive regulation of transcription from RNA polymerase II promoter
Is a GO:0001015 snoRNA transcription from an RNA polymerase II promoter
Regulates GO:0001196 regulation of mating-type specific transcription from RNA polymerase II promoter
Regulates GO:0001197 positive regulation of mating-type specific transcription from RNA polymerase II promoter
Regulates GO:0001198 negative regulation of mating-type specific transcription from RNA polymerase II promoter
Regulates GO:0072361 regulation of glycolytic process by regulation of transcription from RNA polymerase II promoter
Negatively regulates GO:0072362 regulation of glycolytic process by negative regulation of transcription from RNA polymerase II promoter
Positively regulates GO:0072363 regulation of glycolytic process by positive regulation of transcription from RNA polymerase II promoter
Regulates GO:0072364 regulation of cellular ketone metabolic process by regulation of transcription from RNA polymerase II promoter
Negatively regulates GO:0072365 regulation of cellular ketone metabolic process by negative regulation of transcription from RNA polymerase II promoter
Positively regulates GO:0072366 regulation of cellular ketone metabolic process by positive regulation of transcription from RNA polymerase II promoter
Regulates GO:0072367 regulation of lipid transport by regulation of transcription from RNA polymerase II promoter
Negatively regulates GO:0072368 regulation of lipid transport by negative regulation of transcription from RNA polymerase II promoter
Positively regulates GO:0072369 regulation of lipid transport by positive regulation of transcription from RNA polymerase II promoter
Regulates GO:1900621 regulation of transcription from RNA polymerase II promoter by calcium-mediated signaling
Positively regulates GO:1900622 positive regulation of transcription from RNA polymerase II promoter by calcium-mediated signaling
Regulates GO:1903756 regulation of transcription from RNA polymerase II promoter by histone modification
Positively regulates GO:1903757 positive regulation of transcription from RNA polymerase II promoter by histone modification
Negatively regulates GO:1903758 negative regulation of transcription from RNA polymerase II promoter by histone modification
Is a GO:0061614 pri-miRNA transcription from RNA polymerase II promoter
Regulates GO:0035947 regulation of gluconeogenesis by regulation of transcription from RNA polymerase II promoter
Positively regulates GO:0035948 positive regulation of gluconeogenesis by positive regulation of transcription from RNA polymerase II promoter
Negatively regulates GO:0035949 positive regulation of gluconeogenesis by negative regulation of transcription from RNA polymerase II promoter
Regulates GO:0035950 regulation of oligopeptide transport by regulation of transcription from RNA polymerase II promoter
Positively regulates GO:0035951 positive regulation of oligopeptide transport by positive regulation of transcription from RNA polymerase II promoter
Negatively regulates GO:0035952 negative regulation of oligopeptide transport by negative regulation of transcription from RNA polymerase II promoter
Regulates GO:0035953 regulation of dipeptide transport by regulation of transcription from RNA polymerase II promoter
Positively regulates GO:0035954 positive regulation of dipeptide transport by positive regulation of transcription from RNA polymerase II promoter
Negatively regulates GO:0035955 negative regulation of dipeptide transport by negative regulation of transcription from RNA polymerase II promoter
Regulates GO:0035956 regulation of starch catabolic process by regulation of transcription from RNA polymerase II promoter
Positively regulates GO:0035957 positive regulation of starch catabolic process by positive regulation of transcription from RNA polymerase II promoter
Regulates GO:0035958 regulation of glyoxylate cycle by regulation of transcription from RNA polymerase II promoter
Positively regulates GO:0035959 positive regulation of glyoxylate cycle by positive regulation of transcription from RNA polymerase II promoter
Regulates GO:0035960 regulation of ergosterol biosynthetic process by regulation of transcription from RNA polymerase II promoter
Positively regulates GO:0035961 positive regulation of ergosterol biosynthetic process by positive regulation of transcription from RNA polymerase II promoter
Regulates GO:0035968 regulation of sterol import by regulation of transcription from RNA polymerase II promoter
Positively regulates GO:0035969 positive regulation of sterol import by positive regulation of transcription from RNA polymerase II promoter
Positively regulates GO:0036083 positive regulation of unsaturated fatty acid biosynthetic process by positive regulation of transcription from RNA polymerase II promoter
Positively regulates GO:0036278 positive regulation of transcription from RNA polymerase II promoter in response to nitrogen starvation
Part of GO:0001190 RNA polymerase II transcription factor binding transcription activator activity
Part of GO:0001228 RNA polymerase II transcription regulatory region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
Is a GO:0097394 telomeric RNA transcription from RNA pol II promoter
Is a GO:0100004 positive regulation of peroxisome organization by transcription from RNA polymerase II promoter
Is a GO:0100005 positive regulation of ethanol catabolic process by transcription from RNA polymerase II promoter
Is a GO:0100007 negative regulation of ceramide biosynthetic process by transcription from RNA polymerase II promoter
Is a GO:0100013 positive regulation of fatty acid beta-oxidation by transcription from RNA polymerase II promoter
Is a GO:0100014 positive regulation of mating type switching by transcription from RNA polymerase II promoter
Is a GO:0100016 regulation of thiamine biosynthetic process by transcription from RNA polymerase II promoter
Is a GO:0100017 negative regulation of cell-cell adhesion by transcription from RNA polymerase II promoter
Is a GO:0100019 regulation of cAMP-mediated signaling by transcription from RNA polymerase II promoter
Is a GO:0100020 regulation of transport by transcription from RNA polymerase II promoter
Is a GO:0100023 regulation of meiotic nuclear division by transcription from RNA polymerase II promoter
Is a GO:0100024 regulation of carbohydrate metabolic process by transcription from RNA polymerase II promoter
Is a GO:0100025 negative regulation of cellular amino acid biosynthetic process by transcription from RNA polymerase II promoter
Is a GO:0100026 positive regulation of DNA repair by transcription from RNA polymerase II promoter
Is a GO:0100027 regulation of cell separation after cytokinesis by transcription from RNA polymerase II promoter
Is a GO:0100028 regulation of conjugation with cellular fusion by transcription from RNA polymerase II promoter
Is a GO:0100029 regulation of histone modification by transcription from RNA polymerase II promoter
Is a GO:0100032 positive regulation of phospholipid biosynthetic process by transcription from RNA polymerase II promoter
Is a GO:0100033 regulation of fungal-type cell wall biogenesis by transcription from RNA polymerase II promoter
Is a GO:0100036 positive regulation of purine nucleotide biosynthetic process by transcription from RNA polymerase II promoter
Is a GO:0100037 positive regulation of cellular alcohol catabolic process by transcription from RNA polymerase II promoter
Is a GO:0100038 regulation of cellular response to oxidative stress by transcription from RNA polymerase II promoter
Is a GO:0100039 regulation of pyrimidine nucleotide biosynthetic process by transcription from RNA polymerase II promoter
Is a GO:0100040 negative regulation of invasive growth in response to glucose limitation by transcription from RNA polymerase II promoter
Is a GO:0100041 positive regulation of pseudohyphal growth by transcription from RNA polymerase II promoter
Is a GO:0100042 negative regulation of pseudohyphal growth by transcription from RNA polymerase II promoter
Is a GO:0100043 negative regulation of cellular response to alkaline pH by transcription from RNA polymerase II promoter
Is a GO:0100044 negative regulation of cellular hyperosmotic salinity response by transcription from RNA polymerase II promoter
Is a GO:0100045 negative regulation of arginine catabolic process by transcription from RNA polymerase II promoter
Is a GO:0100046 positive regulation of arginine biosynthetic process by transcription from RNA polymerase II promoter
Is a GO:0100049 negative regulation of phosphatidylcholine biosynthetic process by transcription from RNA polymerase II promoter
Is a GO:0100050 negative regulation of mating type switching by transcription from RNA polymerase II promoter
Is a GO:0100052 negative regulation of G1/S transition of mitotic cell cycle by transcription from RNA polymerase II promoter
Is a GO:0100053 positive regulation of sulfate assimilation by transcription from RNA polymerase II promoter
Is a GO:0100054 positive regulation of flocculation via cell wall protein-carbohydrate interaction by transcription from RNA polymerase II promoter
Is a GO:0100057 regulation of phenotypic switching by transcription from RNA polymerase II promoter
Is a GO:0100064 negative regulation of filamentous growth of a population of unicellular organisms in response to starvation by transcription from RNA polymerase II promoter
Is a GO:0100066 negative regulation of induction of conjugation with cellular fusion by transcription from RNA polymerase II promoter
Is a GO:0100068 positive regulation of pyrimidine-containing compound salvage by transcription from RNA polymerase II promoter
Is a GO:0100069 negative regulation of neuron apoptotic process by transcription from RNA polymerase II promoter
Is a GO:0100070 regulation of fatty acid biosynthetic process by transcription from RNA polymerase II promoter
Capable of GO:0090575 RNA polymerase II transcription factor complex

Protein Annotation

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Co-occurring Terms

These tables show the number of times the term listed in the table has been co-annotated with GO:0006366. The terms are listed in descending order of number of times the term has been co-annotated.
The table on the left is calculated using both electronic and manual-evidenced annotations, while the table on the right is calculated using only manual-evidenced annotations.
Co-occurrence statistics for GO:0006366 based on the entire annotation set Co-occurrence statistics for GO:0006366 based on non-IEA annotations only

Change Log

All changes

Timestamp Action Category Detail
2013-04-18 Updated SLIM goslim_yeast
2011-11-24 Deleted SLIM goslim_pombe
2011-11-17 Added SYNONYM RNA polymerase II transcription factor activity
2011-10-02 Added SLIM goslim_pombe
2011-08-14 Added SLIM goslim_yeast
2011-05-15 Added SECONDARY GO:0032569 (gene-specific transcription from RNA polymerase II promoter)
2011-05-15 Added SECONDARY GO:0032568 (general transcription from RNA polymerase II promoter)
2011-05-15 Added SYNONYM general transcription from RNA polymerase II promoter
2011-05-15 Added SYNONYM gene-specific transcription from RNA polymerase II promoter
2011-05-15 Added SYNONYM specific transcription from RNA polymerase II promoter
2011-05-12 Added DEFINITION The synthesis of RNA from a DNA template by RNA polymerase II, originating at an RNA polymerase II promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs).
2011-05-12 Deleted DEFINITION The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs).
2008-05-13 Added DEFINITION The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs).
2008-05-12 Deleted DEFINITION The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs).
2008-04-01 Updated RELATION is a GO:0006351 (transcription, DNA-templated)
2007-08-09 Added SYNONYM transcription from Pol II promoter
2007-08-09 Deleted SYNONYM transcription from Pol II promoter
2005-03-27 Updated TERM transcription from RNA polymerase II promoter
2005-03-27 Added SYNONYM transcription from Pol II promoter
2005-03-19 Updated DEFINITION The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs).
2003-06-17 Added DEFINITION The synthesis of RNA from a DNA template by RNA Polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs).
2002-07-16 Updated TERM transcription from Pol II promoter
2002-02-06 Updated TERM transcription, from Pol II promoter
2001-10-04 Updated TERM transcription, from Pol II promoter
2001-04-03 Updated TERM transcription from Pol II promoter
2001-03-30 Added TERM transcription from Pol II promoter

Term

Timestamp Action Category Detail
2005-03-27 Updated TERM transcription from RNA polymerase II promoter
2002-07-16 Updated TERM transcription from Pol II promoter
2002-02-06 Updated TERM transcription, from Pol II promoter
2001-10-04 Updated TERM transcription, from Pol II promoter
2001-04-03 Updated TERM transcription from Pol II promoter
2001-03-30 Added TERM transcription from Pol II promoter

Definition/synonyms

Timestamp Action Category Detail
2011-11-17 Added SYNONYM RNA polymerase II transcription factor activity
2011-05-15 Added SYNONYM general transcription from RNA polymerase II promoter
2011-05-15 Added SYNONYM gene-specific transcription from RNA polymerase II promoter
2011-05-15 Added SYNONYM specific transcription from RNA polymerase II promoter
2011-05-12 Added DEFINITION The synthesis of RNA from a DNA template by RNA polymerase II, originating at an RNA polymerase II promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs).
2011-05-12 Deleted DEFINITION The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs).
2008-05-13 Added DEFINITION The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs).
2008-05-12 Deleted DEFINITION The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs).
2007-08-09 Added SYNONYM transcription from Pol II promoter
2007-08-09 Deleted SYNONYM transcription from Pol II promoter
2005-03-27 Added SYNONYM transcription from Pol II promoter
2005-03-19 Updated DEFINITION The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs).
2003-06-17 Added DEFINITION The synthesis of RNA from a DNA template by RNA Polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs).

Relationships

Timestamp Action Category Detail
2008-04-01 Updated RELATION is a GO:0006351 (transcription, DNA-templated)

Other

Timestamp Action Category Detail
2013-04-18 Updated SLIM goslim_yeast
2011-11-24 Deleted SLIM goslim_pombe
2011-10-02 Added SLIM goslim_pombe
2011-08-14 Added SLIM goslim_yeast
2011-05-15 Added SECONDARY GO:0032569 (gene-specific transcription from RNA polymerase II promoter)
2011-05-15 Added SECONDARY GO:0032568 (general transcription from RNA polymerase II promoter)
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