spacer

GO:0006357 regulation of transcription from RNA polymerase II promoter

Term Information

ID GO:0006357
Name regulation of transcription from RNA polymerase II promoter
Ontology Biological Process
Definition Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter.
Secondary IDs GO:0006358 GO:0010551
GONUTS GO:0006357 Wiki Page

Synonyms

Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope. Click on the icon for more details.
Type Synonym
related regulation of transcription from RNA polymerase II promoter, global
related global transcription regulation from Pol II promoter
related regulation of gene-specific transcription from RNA polymerase II promoter
exact regulation of transcription from Pol II promoter
related regulation of global transcription from Pol II promoter

Annotation Guidance

Usage of this term is subject to the following annotation guidelines:
Annotation Guidelines
Annotating to transcription processesLink

Cross-references

Database ID
InterPro IPR007018
InterPro IPR008626
InterPro IPR008728
InterPro IPR009244
InterPro IPR009332
InterPro IPR009401
InterPro IPR011425
InterPro IPR013921
InterPro IPR013942
InterPro IPR013947
InterPro IPR014801
InterPro IPR016492
InterPro IPR016530
InterPro IPR016532
InterPro IPR016612
InterPro IPR016820
InterPro IPR017071
InterPro IPR017072
InterPro IPR019035
InterPro IPR019087
InterPro IPR019095
InterPro IPR019145
InterPro IPR019258
InterPro IPR019313
InterPro IPR019364
InterPro IPR019403
InterPro IPR019404
InterPro IPR019680
InterPro IPR020998
InterPro IPR026649
InterPro IPR027113
InterPro IPR027712
InterPro IPR027722
InterPro IPR027723
InterPro IPR027729
InterPro IPR027742
InterPro IPR027757
InterPro IPR027758
InterPro IPR028309
InterPro IPR028769
InterPro IPR028773
InterPro IPR028778
InterPro IPR028782
InterPro IPR028785
InterPro IPR028794

Replaces

This term can be used instead of these obsolete terms:
GO Identifier GO Term Name Reason
GO:0034339 regulation of transcription from RNA polymerase II promoter by nuclear hormone receptor CONSIDER GO:0006357

Ancestor Chart

This chart is interactive; you can click on the term boxes and legend for more information.
Display options
Display
Key
GO IDs
Term box width
Term box height
Slim colours
Show children
Image size limit (in megapixels)
Note that setting the limit too high may result in images being generated slowly; it may even cause the browser to crash. The maximum limit is 20 megapixels.

Child Terms

This table lists all terms that are direct descendants (child terms) of GO:0006357:
Relationship To GO:0006357 Child Term Child Term Name
Is a GO:0000117 regulation of transcription involved in G2/M transition of mitotic cell cycle
Is a GO:0000122 negative regulation of transcription from RNA polymerase II promoter
Is a GO:0045944 positive regulation of transcription from RNA polymerase II promoter
Is a GO:0046021 regulation of transcription from RNA polymerase II promoter, mitotic
Is a GO:0043618 regulation of transcription from RNA polymerase II promoter in response to stress
Is a GO:1901580 regulation of telomeric RNA transcription from RNA pol II promoter
Is a GO:0001079 nitrogen catabolite regulation of transcription from RNA polymerase II promoter
Is a GO:0060850 regulation of transcription involved in cell fate commitment
Is a GO:0010672 regulation of transcription from RNA polymerase II promoter during meiosis
Is a GO:0072361 regulation of glycolytic process by regulation of transcription from RNA polymerase II promoter
Is a GO:0072364 regulation of cellular ketone metabolic process by regulation of transcription from RNA polymerase II promoter
Is a GO:0034243 regulation of transcription elongation from RNA polymerase II promoter
Is a GO:0060994 regulation of transcription from RNA polymerase II promoter involved in kidney development
Is a GO:0072367 regulation of lipid transport by regulation of transcription from RNA polymerase II promoter
Is a GO:0060500 regulation of transcription from RNA polymerase II promoter involved in lung bud formation
Is a GO:0060260 regulation of transcription initiation from RNA polymerase II promoter
Is a GO:0070816 phosphorylation of RNA polymerase II C-terminal domain
Is a GO:0070940 dephosphorylation of RNA polymerase II C-terminal domain
Is a GO:0090236 regulation of transcription from RNA polymerase II promoter involved in somitogenesis
Is a GO:0000429 carbon catabolite regulation of transcription from RNA polymerase II promoter
Is a GO:0060597 regulation of transcription from RNA polymerase II promoter involved in mammary gland formation
Is a GO:0090019 regulation of transcription involved in anterior neural plate formation
Is a GO:0090020 regulation of transcription involved in posterior neural plate formation
Is a GO:1900401 regulation of meiosis by regulation of transcription from RNA polymerase II promoter
Is a GO:1900402 regulation of carbohydrate metabolic process by regulation of transcription from RNA polymerase II promoter
Is a GO:1900405 regulation of cytokinetic cell separation by regulation of transcription from RNA polymerase II promoter
Is a GO:1900406 regulation of conjugation with cellular fusion by regulation of transcription from RNA polymerase II promoter
Is a GO:1900410 regulation of histone modification by regulation of transcription from RNA polymerase II promoter
Is a GO:1900415 regulation of fungal-type cell wall biogenesis by regulation of transcription from RNA polymerase II promoter
Is a GO:0001196 regulation of mating-type specific transcription from RNA polymerase II promoter
Is a GO:0035950 regulation of oligopeptide transport by regulation of transcription from RNA polymerase II promoter
Is a GO:0035956 regulation of starch catabolic process by regulation of transcription from RNA polymerase II promoter
Is a GO:0035960 regulation of ergosterol biosynthetic process by regulation of transcription from RNA polymerase II promoter
Is a GO:1902574 negative regulation of leucine import by regulation of transcription from RNA polymerase II promoter
Is a GO:0061432 regulation of transcription from RNA polymerase II promoter in response to methionine
Is a GO:1900374 positive regulation of mating type switching by regulation of transcription from RNA polymerase II promoter
Is a GO:1900382 regulation of thiamine biosynthetic process by regulation of transcription from RNA polymerase II promoter
Is a GO:0061396 regulation of transcription from RNA polymerase II promoter in response to copper ion
Is a GO:1900545 regulation of phenotypic switching by regulation of transcription from RNA polymerase II promoter
Is a GO:1902893 regulation of pri-miRNA transcription from RNA polymerase II promoter
Is a GO:0061434 regulation of replicative cell aging by regulation of transcription from RNA polymerase II promoter in response to caloric restriction
Is a GO:2000976 regulation of transcription from RNA polymerase II promoter involved in detection of glucose
Is a GO:1900448 regulation of pyrimidine nucleotide biosynthetic process by positive regulation of transcription from RNA polymerase II promoter
Is a GO:1900427 regulation of cellular response to oxidative stress by regulation of transcription from RNA polymerase II promoter
Is a GO:1900388 regulation of vesicle-mediated transport by regulation of transcription from RNA polymerase II promoter
Is a GO:1900389 regulation of glucose import by regulation of transcription from RNA polymerase II promoter
Is a GO:1900391 regulation of cAMP-mediated signaling by regulation of transcription from RNA polymerase II promoter
Is a GO:1900393 regulation of iron ion transport by regulation of transcription from RNA polymerase II promoter
Is a GO:1902064 regulation of transcription from RNA polymerase II promoter involved in spermatogenesis
Is a GO:1900621 regulation of transcription from RNA polymerase II promoter by calcium-mediated signaling
Is a GO:0008293 torso signaling pathway
Is a GO:1901213 regulation of transcription from RNA polymerase II promoter involved in heart development
Is a GO:0030509 BMP signaling pathway
Is a GO:2000804 regulation of termination of RNA polymerase II transcription, poly(A)-coupled
Is a GO:0021909 regulation of transcription from RNA polymerase II promoter involved in spinal cord anterior-posterior patterning
Is a GO:0000083 regulation of transcription involved in G1/S transition of mitotic cell cycle
Is a GO:0046019 regulation of transcription from RNA polymerase II promoter by pheromones
Is a GO:0034395 regulation of transcription from RNA polymerase II promoter in response to iron
Is a GO:0060962 regulation of ribosomal protein gene transcription from RNA polymerase II promoter
Is a GO:2000823 regulation of androgen receptor activity
Part of GO:0000981 sequence-specific DNA binding RNA polymerase II transcription factor activity
Part of GO:0001076 RNA polymerase II transcription factor binding transcription factor activity
Is a GO:1900094 regulation of transcription from RNA polymerase II promoter involved in determination of left/right symmetry

Protein Annotation

Displaying annotations FIRST to LAST of TOTAL Page size: Additional filters: Bookmarkable link
Database
Gene Product ID
Symbol
Qualifier
GO Identifier
GO Term Name
Aspect
Original GO ID
Original GO Term Name
Evidence
Reference
With
Taxon
Date
Assigned By
Product Form ID
Name
Synonym
Type
Taxon Name
Sequence

Export

Display options

ID Mapping

QuickGO maps between different identifier types by using a combination of mapping files provided by the databases, and using identifier cross-references supplied by UniProtKB.

If more than one identifier type needs to be used to map all required sequences, drag the selected databases to change the order in which identifiers are found.

Filter

Select

Grouped by
Annotation count
Protein count
Both

Co-occurring Terms

These tables show the number of times the term listed in the table has been co-annotated with GO:0006357. The terms are listed in descending order of number of times the term has been co-annotated.
The table on the left is calculated using both electronic and manual-evidenced annotations, while the table on the right is calculated using only manual-evidenced annotations.
Co-occurrence statistics for GO:0006357 based on the entire annotation set Co-occurrence statistics for GO:0006357 based on non-IEA annotations only

Change Log

All changes

Timestamp Action Category Detail
2011-06-05 Added SYNONYM global transcription regulation from Pol II promoter
2011-06-05 Added SYNONYM regulation of global transcription from Pol II promoter
2011-06-05 Added SYNONYM regulation of transcription from RNA polymerase II promoter, global
2011-06-05 Added SECONDARY GO:0006358 (regulation of transcription from RNA polymerase II promoter, global)
2011-05-15 Added SECONDARY GO:0010551 (regulation of gene-specific transcription from RNA polymerase II promoter)
2011-05-15 Added SYNONYM regulation of gene-specific transcription from RNA polymerase II promoter
2008-05-13 Added DEFINITION Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter.
2008-05-12 Deleted DEFINITION Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter.
2008-04-01 Updated RELATION is a GO:0006355 (regulation of transcription, DNA-templated)
2008-04-01 Deleted RELATION part of GO:0006366 (transcription from RNA polymerase II promoter)
2008-04-01 Added RELATION regulates GO:0006366 (transcription from RNA polymerase II promoter)
2008-04-01 Updated RELATION part of GO:0006366 (transcription from RNA polymerase II promoter)
2007-08-09 Added SYNONYM regulation of transcription from Pol II promoter
2007-08-09 Deleted SYNONYM regulation of transcription from Pol II promoter
2005-03-27 Updated TERM regulation of transcription from RNA polymerase II promoter
2005-03-27 Added SYNONYM regulation of transcription from Pol II promoter
2005-03-25 Updated DEFINITION Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter.
2002-11-27 Added DEFINITION Any process that modulates the frequency, rate or extent of transcription from Pol II promoter.
2002-07-17 Updated TERM regulation of transcription from Pol II promoter
2002-07-16 Updated TERM transcription regulation from Pol II promoter
2002-02-06 Updated TERM transcription regulation, from Pol II promoter
2001-10-04 Updated TERM transcription regulation, from Pol II promoter
2001-04-03 Updated TERM transcription regulation from Pol II promoter
2001-03-30 Added TERM transcription regulation from Pol II promoter

Term

Timestamp Action Category Detail
2005-03-27 Updated TERM regulation of transcription from RNA polymerase II promoter
2002-07-17 Updated TERM regulation of transcription from Pol II promoter
2002-07-16 Updated TERM transcription regulation from Pol II promoter
2002-02-06 Updated TERM transcription regulation, from Pol II promoter
2001-10-04 Updated TERM transcription regulation, from Pol II promoter
2001-04-03 Updated TERM transcription regulation from Pol II promoter
2001-03-30 Added TERM transcription regulation from Pol II promoter

Definition/synonyms

Timestamp Action Category Detail
2011-06-05 Added SYNONYM global transcription regulation from Pol II promoter
2011-06-05 Added SYNONYM regulation of global transcription from Pol II promoter
2011-06-05 Added SYNONYM regulation of transcription from RNA polymerase II promoter, global
2011-05-15 Added SYNONYM regulation of gene-specific transcription from RNA polymerase II promoter
2008-05-13 Added DEFINITION Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter.
2008-05-12 Deleted DEFINITION Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter.
2007-08-09 Added SYNONYM regulation of transcription from Pol II promoter
2007-08-09 Deleted SYNONYM regulation of transcription from Pol II promoter
2005-03-27 Added SYNONYM regulation of transcription from Pol II promoter
2005-03-25 Updated DEFINITION Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter.
2002-11-27 Added DEFINITION Any process that modulates the frequency, rate or extent of transcription from Pol II promoter.

Relationships

Timestamp Action Category Detail
2008-04-01 Updated RELATION is a GO:0006355 (regulation of transcription, DNA-templated)
2008-04-01 Deleted RELATION part of GO:0006366 (transcription from RNA polymerase II promoter)
2008-04-01 Added RELATION regulates GO:0006366 (transcription from RNA polymerase II promoter)
2008-04-01 Updated RELATION part of GO:0006366 (transcription from RNA polymerase II promoter)

Other

Timestamp Action Category Detail
2011-06-05 Added SECONDARY GO:0006358 (regulation of transcription from RNA polymerase II promoter, global)
2011-05-15 Added SECONDARY GO:0010551 (regulation of gene-specific transcription from RNA polymerase II promoter)
spacer
Please send comments, suggestions or bug reports to goa@ebi.ac.uk. Click here for details of how to cite UniProt-GOA and QuickGO.
58ms