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EBIDatabasesQuickGO

GO:0006355 regulation of transcription, DNA-dependent

Any process that modulates the frequency, rate or extent of DNA-dependent transcription.

Term Information

ID GO:0006355
Name regulation of transcription, DNA-dependent
Ontology Biological Process
Definition Any process that modulates the frequency, rate or extent of DNA-dependent transcription.
Comment

Synonyms

Type Synonym
broad transcriptional control

Cross-references associated with this term:

Database ID
INTERPRO IPR013318
INTERPRO IPR005241
INTERPRO IPR006289
INTERPRO IPR008366
INTERPRO IPR013019
INTERPRO IPR017155
INTERPRO IPR018373
INTERPRO IPR014402
INTERPRO IPR003120
INTERPRO IPR011615
INTERPRO IPR011616
INTERPRO IPR003074
INTERPRO IPR003075
INTERPRO IPR003076
INTERPRO IPR003077
INTERPRO IPR003078
INTERPRO IPR003079
INTERPRO IPR000148
INTERPRO IPR018334
INTERPRO IPR018335
INTERPRO IPR019017
INTERPRO IPR019015
INTERPRO IPR003150
INTERPRO IPR004979
INTERPRO IPR004998
INTERPRO IPR005022
INTERPRO IPR005028
INTERPRO IPR005029
INTERPRO IPR005033
INTERPRO IPR005051
INTERPRO IPR003101
INTERPRO IPR003102
INTERPRO IPR003106
INTERPRO IPR011700
INTERPRO IPR013325
INTERPRO IPR006027
INTERPRO IPR001866
INTERPRO IPR001867
INTERPRO IPR004826
INTERPRO IPR004827
INTERPRO IPR002927
INTERPRO IPR007654
INTERPRO IPR013257
INTERPRO IPR012781
INTERPRO IPR001909
INTERPRO IPR003068
INTERPRO IPR003069
INTERPRO IPR003070
INTERPRO IPR003071
INTERPRO IPR003072
INTERPRO IPR003073
INTERPRO IPR000943
INTERPRO IPR000967
INTERPRO IPR000972
INTERPRO IPR000976
INTERPRO IPR016481
INTERPRO IPR016375
INTERPRO IPR016032
INTERPRO IPR014754
INTERPRO IPR003956
INTERPRO IPR001699
INTERPRO IPR003902
INTERPRO IPR001647
INTERPRO IPR001669
INTERPRO IPR001610
INTERPRO IPR001628
INTERPRO IPR001630
INTERPRO IPR011177
INTERPRO IPR000792
INTERPRO IPR012239
INTERPRO IPR012243
INTERPRO IPR014237
INTERPRO IPR004026
INTERPRO IPR000843
INTERPRO IPR000847
INTERPRO IPR000812
INTERPRO IPR000814
INTERPRO IPR000818
INTERPRO IPR000824
INTERPRO IPR000831
INTERPRO IPR000835
INTERPRO IPR000838
INTERPRO IPR003711
INTERPRO IPR001827
INTERPRO IPR001831
INTERPRO IPR001845
INTERPRO IPR001789
INTERPRO IPR000580
INTERPRO IPR000524
INTERPRO IPR000536
INTERPRO IPR000551
INTERPRO IPR000485
INTERPRO IPR006715
INTERPRO IPR003893
INTERPRO IPR003894
INTERPRO IPR008955
INTERPRO IPR009464
INTERPRO IPR000637
INTERPRO IPR012345
INTERPRO IPR013088
INTERPRO IPR002546
INTERPRO IPR002568
INTERPRO IPR002571
INTERPRO IPR011608
INTERPRO IPR018287
INTERPRO IPR010242
INTERPRO IPR002515
INTERPRO IPR002481
INTERPRO IPR002487
INTERPRO IPR002409
INTERPRO IPR002418
INTERPRO IPR004598
INTERPRO IPR004600
INTERPRO IPR016569
INTERPRO IPR016861
INTERPRO IPR014296
INTERPRO IPR014293
INTERPRO IPR013767
INTERPRO IPR018186
INTERPRO IPR001801
INTERPRO IPR001808
INTERPRO IPR001766
INTERPRO IPR015988
INTERPRO IPR001723
INTERPRO IPR001728
INTERPRO IPR014286
INTERPRO IPR014284
INTERPRO IPR014236
INTERPRO IPR014212
INTERPRO IPR014322
INTERPRO IPR014218
INTERPRO IPR014209
INTERPRO IPR014200
INTERPRO IPR013249
INTERPRO IPR003822
INTERPRO IPR003853
INTERPRO IPR001471
INTERPRO IPR007631
INTERPRO IPR009042
INTERPRO IPR000451
INTERPRO IPR018286
INTERPRO IPR000418
INTERPRO IPR000427
INTERPRO IPR004409
INTERPRO IPR013324
INTERPRO IPR013800
INTERPRO IPR017970
INTERPRO IPR000647
INTERPRO IPR000655
INTERPRO IPR008121
INTERPRO IPR008122
INTERPRO IPR008123
INTERPRO IPR010578
INTERPRO IPR008946
INTERPRO IPR010211
INTERPRO IPR000679
INTERPRO IPR000625
INTERPRO IPR008771
INTERPRO IPR001346
INTERPRO IPR001356
INTERPRO IPR001321
INTERPRO IPR018356
INTERPRO IPR013515
INTERPRO IPR003619
INTERPRO IPR003650
INTERPRO IPR003655
INTERPRO IPR000324
INTERPRO IPR000327
INTERPRO IPR004356
INTERPRO IPR004369
INTERPRO IPR004341
INTERPRO IPR005001
INTERPRO IPR007624
INTERPRO IPR007627
INTERPRO IPR007630
INTERPRO IPR000394
INTERPRO IPR016376
INTERPRO IPR001437
INTERPRO IPR002100
INTERPRO IPR002112
INTERPRO IPR002117
INTERPRO IPR003316
INTERPRO IPR003327
INTERPRO IPR003340
INTERPRO IPR003309
INTERPRO IPR003313
INTERPRO IPR001103
INTERPRO IPR001132
INTERPRO IPR001138
INTERPRO IPR009044
INTERPRO IPR000197
INTERPRO IPR019817
INTERPRO IPR013335
INTERPRO IPR013790
INTERPRO IPR013799
INTERPRO IPR003658
INTERPRO IPR012346
INTERPRO IPR013524
INTERPRO IPR015351
INTERPRO IPR002197
INTERPRO IPR000278
INTERPRO IPR000281
INTERPRO IPR002145
INTERPRO IPR000232
INTERPRO IPR003523
INTERPRO IPR001367
INTERPRO IPR001409
INTERPRO IPR019885
INTERPRO IPR019887
INTERPRO IPR019888
INTERPRO IPR005412
INTERPRO IPR000003
INTERPRO IPR000005
INTERPRO IPR017995
INTERPRO IPR010215
INTERPRO IPR010216
INTERPRO IPR005471
INTERPRO IPR019471
INTERPRO IPR019041
INTERPRO IPR018122
INTERPRO IPR018151
INTERPRO IPR018381
INTERPRO IPR014879
INTERPRO IPR002059
INTERPRO IPR000128
INTERPRO IPR000116
INTERPRO IPR000040
INTERPRO IPR000047
INTERPRO IPR001062
INTERPRO IPR001067
INTERPRO IPR001083
INTERPRO IPR001034
INTERPRO IPR002070
INTERPRO IPR002078
INTERPRO IPR002084
INTERPRO IPR012682
INTERPRO IPR010542
INTERPRO IPR001217
INTERPRO IPR006358
INTERPRO IPR006359
INTERPRO IPR013801
INTERPRO IPR012751
INTERPRO IPR012760
INTERPRO IPR012759
INTERPRO IPR012761
INTERPRO IPR003222
INTERPRO IPR003223
INTERPRO IPR001292
INTERPRO IPR001294
INTERPRO IPR003163
INTERPRO IPR003173
INTERPRO IPR003174
INTERPRO IPR001275
INTERPRO IPR001289

Web service: term information

Use this URI template to access this data as a service:

GTerm?id=termID&format=format

Full details can be found on the QuickGO Web Services page.

Ancestor Chart

Visual display of a section of the GO directed acyclic graph (DAG) for a single GO term. Terms in the GO are linked to parent (more general) terms and often to child (more specific) terms by one or more 'relationships'

All GO terms displayed in this graph can be clicked to display term definitions and child (descendent) terms.

Chart

Ancestor Table

Alternative display of a section of the GO, providing a concise view of the relationships connecting GO terms

All GO terms displayed in this chart can be right-clicked to display term definitions and child (descendent) terms.

GO:0008150 biological_process
GO:0009987 cellular process
GO:0008152 metabolic process
GO:0065007 biological regulation
GO:0044238 primary metabolic process
GO:0050789 regulation of biological process
GO:0006807 nitrogen compound metabolic process
GO:0043170 macromolecule metabolic process
GO:0009058 biosynthetic process
GO:0043283 biopolymer metabolic process
GO:0044237 cellular metabolic process
GO:0010467 gene expression
GO:0009059 macromolecule biosynthetic process
GO:0019222 regulation of metabolic process
GO:0050794 regulation of cellular process
GO:0044260 cellular macromolecule metabolic process
GO:0044249 cellular biosynthetic process
GO:0006139 nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
GO:0043284 biopolymer biosynthetic process
GO:0080090 regulation of primary metabolic process
GO:0060255 regulation of macromolecule metabolic process
GO:0051171 regulation of nitrogen compound metabolic process
GO:0009889 regulation of biosynthetic process
GO:0034960 cellular biopolymer metabolic process
GO:0031323 regulation of cellular metabolic process
GO:0010468 regulation of gene expression
GO:0034645 cellular macromolecule biosynthetic process
GO:0010556 regulation of macromolecule biosynthetic process
GO:0016070 RNA metabolic process
GO:0031326 regulation of cellular biosynthetic process
GO:0034961 cellular biopolymer biosynthetic process
GO:0019219 regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
GO:0032774 RNA biosynthetic process
GO:0006350 transcription
GO:0006351 transcription, DNA-dependent
GO:0051252 regulation of RNA metabolic process
GO:0045449 regulation of transcription
GO:0006355 regulation of transcription, DNA-dependent

Relationship key

Code Relationship
part of
is a
regulates
+ve regulates
-ve regulates

Child Terms

All direct descendants (child terms) available for this GO term:
I GO:0045892 negative regulation of transcription, DNA-dependent
I GO:0045893 positive regulation of transcription, DNA-dependent
I GO:0045896 regulation of transcription, mitotic
I GO:0051037 regulation of transcription, meiotic
I GO:0009373 regulation of transcription by pheromones
I GO:0045990 regulation of transcription by carbon catabolites
I GO:0006356 regulation of transcription from RNA polymerase I promoter
I GO:0006357 regulation of transcription from RNA polymerase II promoter
I GO:0006359 regulation of transcription from RNA polymerase III promoter
I GO:0046782 regulation of viral transcription
I GO:0007532 regulation of transcription, mating-type specific
I GO:0032583 regulation of gene-specific transcription
I GO:0060194 regulation of antisense RNA transcription
I GO:0070028 regulation of transcription by carbon monoxide
I GO:0031554 regulation of transcription termination
I GO:0032784 regulation of RNA elongation

Relationship key

CodeRelationship
Ppart of
Iis a

Protein Annotation

DB
ID
Qualifier colocalizes_with contributes_to NOT NOT|colocalizes_with NOT|contributes_to
GO Term
Reference
Evidence IMP IGI IPI IGC ISS IDA IEP IEA TAS NAS ND IC RCA ISA EXP
With
Taxonomy
From
Download limit
Format

Co-occurring Terms

Co-occurrence statistics

This display shows those GO terms which have been annotated to the same proteins as this term.
Terms may have been co-annotated either by electronic (IEA) or manual annotation methods. Users can decide which evidence code type should be used in the calculation of the co-occurence statistics.
Click on the 'Update' button to run the co-occurence calculation
IMP IGI IPI IGC ISS IDA IEP IEA TAS NAS ND IC RCA ISA EXP Statistics may take up to 1 minute to calculate
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19ms
Stand-alone
Hostnametomcat-7.ebi.ac.uk
Uptime16:38 12/10/2009
Data version2009-12-05-04-02-51
Terminal
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