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GO:0006139 nucleobase-containing compound metabolic process

Term Information

ID GO:0006139
Name nucleobase-containing compound metabolic process
Ontology Biological Process
Definition Any cellular metabolic process involving nucleobases, nucleosides, nucleotides and nucleic acids.
Secondary IDs GO:0055134
GONUTS GO:0006139 Wiki Page

Synonyms

Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope. Click on the icon for more details.
Type Synonym
exact cellular nucleobase, nucleoside, nucleotide and nucleic acid metabolism
exact cellular nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
exact nucleobase, nucleoside, nucleotide and nucleic acid metabolism
related nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
related nucleobase, nucleoside and nucleotide metabolic process

GO Slims

This term is present in the following GO Consortium-maintained GO slims:
GO slim nameCount of all terms
goslim_pir462
goslim_plant100

Cross-Ontology Relations

Relation Other Ontology ID Term
has_participant CHEBI CHEBI:61120 nucleobase-containing molecular entity

Cross-references

Database ID
InterPro IPR000850
InterPro IPR002562
InterPro IPR002624
InterPro IPR003136
InterPro IPR004402
InterPro IPR006172
InterPro IPR006555
InterPro IPR006641
InterPro IPR007757
InterPro IPR011268
InterPro IPR011269
InterPro IPR011270
InterPro IPR011892
InterPro IPR011994
InterPro IPR016269
InterPro IPR017151
InterPro IPR017234
InterPro IPR017235
InterPro IPR017964
InterPro IPR024894

Ancestor Chart

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Child Terms

This table lists all terms that are direct descendants (child terms) of GO:0006139:
Relationship To GO:0006139 Child Term Child Term Name
Regulates GO:0019219 regulation of nucleobase-containing compound metabolic process
Negatively regulates GO:0045934 negative regulation of nucleobase-containing compound metabolic process
Positively regulates GO:0045935 positive regulation of nucleobase-containing compound metabolic process
Is a GO:0034654 nucleobase-containing compound biosynthetic process
Is a GO:0034655 nucleobase-containing compound catabolic process
Is a GO:0071514 genetic imprinting
Is a GO:0090304 nucleic acid metabolic process
Is a GO:0055086 nucleobase-containing small molecule metabolic process
Is a GO:0098501 polynucleotide dephosphorylation

Protein Annotation

Displaying annotations FIRST to LAST of TOTAL Page size: Additional filters: Bookmarkable link
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GO Identifier
GO Term Name
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Original GO ID
Original GO Term Name
Evidence
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Date
Assigned By
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Name
Synonym
Type
Taxon Name
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Co-occurring Terms

These tables show the number of times the term listed in the table has been co-annotated with GO:0006139. The terms are listed in descending order of number of times the term has been co-annotated.
The table on the left is calculated using both electronic and manual-evidenced annotations, while the table on the right is calculated using only manual-evidenced annotations.
Co-occurrence statistics for GO:0006139 based on the entire annotation set Co-occurrence statistics for GO:0006139 based on non-IEA annotations only

Change Log

All changes

Timestamp Action Category Detail
2013-04-18 Updated SLIM goslim_plant
2013-04-18 Updated SLIM goslim_pir
2012-09-19 Added RELATION is a GO:0046483 (heterocycle metabolic process)
2012-09-19 Added RELATION is a GO:0006725 (cellular aromatic compound metabolic process)
2012-09-19 Added RELATION is a GO:1901360 (organic cyclic compound metabolic process)
2011-09-28 Added SYNONYM nucleobase, nucleoside and nucleotide metabolic process
2011-09-14 Deleted SYNONYM nucleobase, nucleoside and nucleotide metabolic process
2011-09-14 Deleted SYNONYM nucleobase, nucleoside and nucleotide metabolism
2011-09-14 Deleted RELATION is a GO:0044281 (small molecule metabolic process)
2011-09-14 Deleted SECONDARY GO:0055086 (nucleobase-containing small molecule metabolic process)
2011-09-11 Added SECONDARY GO:0055086 (nucleobase-containing small molecule metabolic process)
2011-09-11 Added RELATION is a GO:0044281 (small molecule metabolic process)
2011-09-11 Added SYNONYM nucleobase, nucleoside and nucleotide metabolic process
2011-09-11 Added SYNONYM nucleobase, nucleoside and nucleotide metabolism
2011-09-11 Added SYNONYM nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
2011-09-11 Updated TERM nucleobase-containing compound metabolic process
2011-03-18 Deleted SLIM goslim_goa
2010-12-05 Deleted SLIM goslim_generic
2010-03-25 Added RELATION is a GO:0034641 (cellular nitrogen compound metabolic process)
2010-03-25 Deleted RELATION is a GO:0044237 (cellular metabolic process)
2010-03-25 Deleted RELATION is a GO:0006807 (nitrogen compound metabolic process)
2010-02-27 Updated TERM nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
2010-02-10 Added SECONDARY GO:0055134 (cellular nucleobase, nucleoside, nucleotide and nucleic acid metabolic process)
2010-02-10 Added RELATION is a GO:0044237 (cellular metabolic process)
2010-02-10 Added SYNONYM cellular nucleobase, nucleoside, nucleotide and nucleic acid metabolism
2010-02-10 Added SYNONYM cellular nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
2010-02-10 Added DEFINITION Any cellular metabolic process involving nucleobases, nucleosides, nucleotides and nucleic acids.
2010-02-10 Deleted DEFINITION The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids.
2010-02-10 Updated TERM cellular nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
2010-01-31 Deleted RELATION is a GO:0044237 (cellular metabolic process)
2009-07-12 Added RELATION is a GO:0006807 (nitrogen compound metabolic process)
2008-06-09 Added SLIM goslim_plant
2008-06-09 Added SLIM goslim_pir
2008-06-09 Added SLIM goslim_goa
2008-06-09 Added SLIM goslim_generic
2008-05-13 Added DEFINITION The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids.
2008-05-12 Deleted DEFINITION The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids.
2008-04-01 Updated RELATION is a GO:0044238 (primary metabolic process)
2008-04-01 Updated RELATION is a GO:0044237 (cellular metabolic process)
2007-08-09 Added SYNONYM nucleobase, nucleoside, nucleotide and nucleic acid metabolism
2007-08-09 Deleted SYNONYM nucleobase, nucleoside, nucleotide and nucleic acid metabolism
2007-01-29 Added SYNONYM nucleobase, nucleoside, nucleotide and nucleic acid metabolism
2007-01-15 Updated TERM nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
2006-05-04 Updated DEFINITION The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids.
2005-01-21 Updated DEFINITION The chemical reactions involving nucleobases, nucleosides, nucleotides and nucleic acids.
2004-09-29 Updated TERM nucleobase, nucleoside, nucleotide and nucleic acid metabolism
2002-11-27 Added DEFINITION The chemical reactions and physical changes involving nucleobases, nucleosides, nucleotides and nucleic acids.
2002-02-06 Updated TERM nucleobase, nucleoside, nucleotide and nucleic acid metabolism
2001-04-03 Updated TERM nucleobase, nucleoside, nucleotide and nucleic acid metabolism
2001-03-30 Added TERM nucleobase, nucleoside, nucleotide and nucleic acid metabolism

Term

Timestamp Action Category Detail
2011-09-11 Updated TERM nucleobase-containing compound metabolic process
2010-02-27 Updated TERM nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
2010-02-10 Updated TERM cellular nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
2007-01-15 Updated TERM nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
2004-09-29 Updated TERM nucleobase, nucleoside, nucleotide and nucleic acid metabolism
2002-02-06 Updated TERM nucleobase, nucleoside, nucleotide and nucleic acid metabolism
2001-04-03 Updated TERM nucleobase, nucleoside, nucleotide and nucleic acid metabolism
2001-03-30 Added TERM nucleobase, nucleoside, nucleotide and nucleic acid metabolism

Definition/synonyms

Timestamp Action Category Detail
2011-09-28 Added SYNONYM nucleobase, nucleoside and nucleotide metabolic process
2011-09-14 Deleted SYNONYM nucleobase, nucleoside and nucleotide metabolic process
2011-09-14 Deleted SYNONYM nucleobase, nucleoside and nucleotide metabolism
2011-09-11 Added SYNONYM nucleobase, nucleoside and nucleotide metabolic process
2011-09-11 Added SYNONYM nucleobase, nucleoside and nucleotide metabolism
2011-09-11 Added SYNONYM nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
2010-02-10 Added SYNONYM cellular nucleobase, nucleoside, nucleotide and nucleic acid metabolism
2010-02-10 Added SYNONYM cellular nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
2010-02-10 Added DEFINITION Any cellular metabolic process involving nucleobases, nucleosides, nucleotides and nucleic acids.
2010-02-10 Deleted DEFINITION The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids.
2008-05-13 Added DEFINITION The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids.
2008-05-12 Deleted DEFINITION The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids.
2007-08-09 Added SYNONYM nucleobase, nucleoside, nucleotide and nucleic acid metabolism
2007-08-09 Deleted SYNONYM nucleobase, nucleoside, nucleotide and nucleic acid metabolism
2007-01-29 Added SYNONYM nucleobase, nucleoside, nucleotide and nucleic acid metabolism
2006-05-04 Updated DEFINITION The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids.
2005-01-21 Updated DEFINITION The chemical reactions involving nucleobases, nucleosides, nucleotides and nucleic acids.
2002-11-27 Added DEFINITION The chemical reactions and physical changes involving nucleobases, nucleosides, nucleotides and nucleic acids.

Relationships

Timestamp Action Category Detail
2012-09-19 Added RELATION is a GO:0046483 (heterocycle metabolic process)
2012-09-19 Added RELATION is a GO:0006725 (cellular aromatic compound metabolic process)
2012-09-19 Added RELATION is a GO:1901360 (organic cyclic compound metabolic process)
2011-09-14 Deleted RELATION is a GO:0044281 (small molecule metabolic process)
2011-09-11 Added RELATION is a GO:0044281 (small molecule metabolic process)
2010-03-25 Added RELATION is a GO:0034641 (cellular nitrogen compound metabolic process)
2010-03-25 Deleted RELATION is a GO:0044237 (cellular metabolic process)
2010-03-25 Deleted RELATION is a GO:0006807 (nitrogen compound metabolic process)
2010-02-10 Added RELATION is a GO:0044237 (cellular metabolic process)
2010-01-31 Deleted RELATION is a GO:0044237 (cellular metabolic process)
2009-07-12 Added RELATION is a GO:0006807 (nitrogen compound metabolic process)
2008-04-01 Updated RELATION is a GO:0044238 (primary metabolic process)
2008-04-01 Updated RELATION is a GO:0044237 (cellular metabolic process)

Other

Timestamp Action Category Detail
2013-04-18 Updated SLIM goslim_plant
2013-04-18 Updated SLIM goslim_pir
2011-09-14 Deleted SECONDARY GO:0055086 (nucleobase-containing small molecule metabolic process)
2011-09-11 Added SECONDARY GO:0055086 (nucleobase-containing small molecule metabolic process)
2011-03-18 Deleted SLIM goslim_goa
2010-12-05 Deleted SLIM goslim_generic
2010-02-10 Added SECONDARY GO:0055134 (cellular nucleobase, nucleoside, nucleotide and nucleic acid metabolic process)
2008-06-09 Added SLIM goslim_plant
2008-06-09 Added SLIM goslim_pir
2008-06-09 Added SLIM goslim_goa
2008-06-09 Added SLIM goslim_generic
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