spacer

GO:0005654 nucleoplasm

Term Information

ID GO:0005654
Name nucleoplasm
Ontology Cellular Component
Definition That part of the nuclear content other than the chromosomes or the nucleolus.
GONUTS GO:0005654 Wiki Page

Taxon Constraints

The use of this term should conform to the following taxon constraints:
Taxon Rule Ancestor GO ID Ancestor GO Term Name Relationship Taxon ID Taxon Reference(s)
GOTAX:0000057 GO:0005623 cell only_in_taxon 131567 cellular organisms
GOTAX:0000059 GO:0005634 nucleus only_in_taxon 2759 Eukaryota
More information on taxon constraints in GO is available here

GO Slims

This term is present in the following GO Consortium-maintained GO slims:
GO slim nameCount of all terms
goslim_generic148
goslim_plant100

Cross-references

Database ID
NIF_Subcellular sao661522542
UniProtKB-SubCell Nucleoplasm
Wikipedia Nucleoplasm

Ancestor Chart

This chart is interactive; you can click on the term boxes and legend for more information.
Display options
Display
Key
GO IDs
Term box width
Term box height
Slim colours
Show children
Image size limit (in megapixels)
Note that setting the limit too high may result in images being generated slowly; it may even cause the browser to crash. The maximum limit is 20 megapixels.

Child Terms

This table lists all terms that are direct descendants (child terms) of GO:0005654:
Relationship To GO:0005654 Child Term Child Term Name
Part of GO:0044451 nucleoplasm part

Protein Annotation

Displaying annotations FIRST to LAST of TOTAL Page size: Additional filters: Bookmarkable link
Database
Gene Product ID
Symbol
Qualifier
GO Identifier
GO Term Name
Aspect
Original GO ID
Original GO Term Name
Evidence
Reference
With
Taxon
Date
Assigned By
Product Form ID
Name
Synonym
Type
Taxon Name
Sequence

Export

Display options

ID Mapping

QuickGO maps between different identifier types by using a combination of mapping files provided by the databases, and using identifier cross-references supplied by UniProtKB.

If more than one identifier type needs to be used to map all required sequences, drag the selected databases to change the order in which identifiers are found.

Filter

Select

Grouped by
Annotation count
Protein count
Both

Co-occurring Terms

These tables show the number of times the term listed in the table has been co-annotated with GO:0005654. The terms are listed in descending order of number of times the term has been co-annotated.
The table on the left is calculated using both electronic and manual-evidenced annotations, while the table on the right is calculated using only manual-evidenced annotations.
Co-occurrence statistics for GO:0005654 based on the entire annotation set Co-occurrence statistics for GO:0005654 based on non-IEA annotations only

Change Log

All changes

Timestamp Action Category Detail
2013-04-18 Updated SLIM goslim_plant
2013-04-18 Updated SLIM goslim_generic
2010-02-04 Added XREF NIF_Subcellular:sao661522542
2009-02-05 Added XREF Wikipedia:Nucleoplasm
2008-06-09 Added SLIM goslim_plant
2008-06-09 Added SLIM goslim_generic
2008-05-13 Added DEFINITION That part of the nuclear content other than the chromosomes or the nucleolus.
2008-05-12 Deleted DEFINITION That part of the nuclear content other than the chromosomes or the nucleolus.
2008-04-01 Updated RELATION is a GO:0044428 (nuclear part)
2008-04-01 Updated RELATION part of GO:0031981 (nuclear lumen)
2002-02-06 Updated TERM nucleoplasm
2001-08-06 Added DEFINITION That part of the nuclear content other than the chromosomes or the nucleolus.
2001-04-03 Updated TERM nucleoplasm
2001-03-30 Added TERM nucleoplasm

Term

Timestamp Action Category Detail
2002-02-06 Updated TERM nucleoplasm
2001-04-03 Updated TERM nucleoplasm
2001-03-30 Added TERM nucleoplasm

Definition/synonyms

Timestamp Action Category Detail
2008-05-13 Added DEFINITION That part of the nuclear content other than the chromosomes or the nucleolus.
2008-05-12 Deleted DEFINITION That part of the nuclear content other than the chromosomes or the nucleolus.
2001-08-06 Added DEFINITION That part of the nuclear content other than the chromosomes or the nucleolus.

Relationships

Timestamp Action Category Detail
2008-04-01 Updated RELATION is a GO:0044428 (nuclear part)
2008-04-01 Updated RELATION part of GO:0031981 (nuclear lumen)

Cross-references

Timestamp Action Category Detail
2010-02-04 Added XREF NIF_Subcellular:sao661522542
2009-02-05 Added XREF Wikipedia:Nucleoplasm

Other

Timestamp Action Category Detail
2013-04-18 Updated SLIM goslim_plant
2013-04-18 Updated SLIM goslim_generic
2008-06-09 Added SLIM goslim_plant
2008-06-09 Added SLIM goslim_generic
spacer
Please send comments, suggestions or bug reports to goa@ebi.ac.uk. Click here for details of how to cite UniProt-GOA and QuickGO.
14ms