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GO:0005643 nuclear pore

Term Information

ID GO:0005643
Name nuclear pore
Ontology Cellular Component
Definition Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined.
Secondary IDs GO:0005644
GONUTS GO:0005643 Wiki Page

Synonyms

Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope. Click on the icon for more details.
Type Synonym
exact nucleopore
exact NPC
exact nuclear pore complex
narrow nuclear pore membrane protein

Taxon Constraints

The use of this term should conform to the following taxon constraints:
Taxon Rule Ancestor GO ID Ancestor GO Term Name Relationship Taxon ID Taxon Reference(s)
GOTAX:0000057 GO:0005623 cell only_in_taxon 131567 cellular organisms
GOTAX:0000059 GO:0005634 nucleus only_in_taxon 2759 Eukaryota
More information on taxon constraints in GO is available here

GO Slims

This term is present in the following GO Consortium-maintained GO slims:
GO slim nameCount of all terms
goslim_pir462

Protein complexes

Database ID Name
IntAct npc_yeast Nuclear pore complex

Cross-references

Database ID
InterPro IPR004870
InterPro IPR007230
InterPro IPR007231
InterPro IPR007252
InterPro IPR012476
InterPro IPR012929
InterPro IPR015007
InterPro IPR018783
InterPro IPR021827
InterPro IPR024864
InterPro IPR024882
InterPro IPR026010
NIF_Subcellular sao220861693
UniProtKB-KW Nuclear pore complex
UniProtKB-SubCell Nuclear pore complex
Wikipedia Nuclear_pore

Replaces

This term can be used instead of these obsolete terms:
GO Identifier GO Term Name Reason
GO:0005645 RAN-binding protein CONSIDER GO:0005643
GO:0005646 importin CONSIDER GO:0005643
GO:0005647 importin, alpha-subunit CONSIDER GO:0005643
GO:0005648 importin, beta-subunit CONSIDER GO:0005643
GO:0005649 transportin CONSIDER GO:0005643
GO:0005650 importin, alpha-subunit transport factor CONSIDER GO:0005643
GO:0005651 exportin CONSIDER GO:0005643

Ancestor Chart

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Child Terms

This table lists all terms that are direct descendants (child terms) of GO:0005643:
Relationship To GO:0005643 Child Term Child Term Name
Part of GO:0031080 nuclear pore outer ring
Part of GO:0070762 nuclear pore transmembrane ring
Part of GO:0044611 nuclear pore inner ring
Part of GO:0044612 nuclear pore linkers
Part of GO:0044613 nuclear pore central transport channel
Part of GO:0044614 nuclear pore cytoplasmic filaments
Part of GO:0044615 nuclear pore nuclear basket

Protein Annotation

Displaying annotations FIRST to LAST of TOTAL Page size: Additional filters: Bookmarkable link
Database
Gene Product ID
Symbol
Qualifier
GO Identifier
GO Term Name
Aspect
Original GO ID
Original GO Term Name
Evidence
Reference
With
Taxon
Date
Assigned By
Product Form ID
Name
Synonym
Type
Taxon Name
Sequence

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Co-occurring Terms

These tables show the number of times the term listed in the table has been co-annotated with GO:0005643. The terms are listed in descending order of number of times the term has been co-annotated.
The table on the left is calculated using both electronic and manual-evidenced annotations, while the table on the right is calculated using only manual-evidenced annotations.
Co-occurrence statistics for GO:0005643 based on the entire annotation set Co-occurrence statistics for GO:0005643 based on non-IEA annotations only

Change Log

All changes

Timestamp Action Category Detail
2013-04-18 Updated SLIM goslim_pir
2011-08-10 Added SYNONYM nucleopore
2010-02-04 Added XREF NIF_Subcellular:sao220861693
2009-12-10 Deleted RELATION is a GO:0043234 (protein complex)
2009-02-05 Added XREF Wikipedia:Nuclear_pore
2008-10-21 Added RELATION is a GO:0044428 (nuclear part)
2008-10-02 Added RELATION part of GO:0005635 (nuclear envelope)
2008-10-02 Deleted RELATION is a GO:0044453 (nuclear membrane part)
2008-06-09 Added SLIM goslim_pir
2008-05-13 Added DEFINITION Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined.
2008-05-12 Deleted DEFINITION Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined.
2008-04-01 Updated RELATION is a GO:0044453 (nuclear membrane part)
2008-04-01 Updated RELATION is a GO:0043234 (protein complex)
2008-04-01 Updated RELATION is a GO:0046930 (pore complex)
2007-08-09 Added SYNONYM NPC
2007-08-09 Added SYNONYM nuclear pore complex
2007-08-09 Added SYNONYM nuclear pore membrane protein
2007-08-09 Deleted SYNONYM NPC
2007-08-09 Deleted SYNONYM nuclear pore complex
2007-08-09 Deleted SYNONYM nuclear pore membrane protein
2005-08-20 Deleted SYNONYM RAN-binding protein
2005-08-20 Deleted SYNONYM exportin
2005-08-20 Deleted SYNONYM importin
2005-08-20 Deleted SYNONYM importin, alpha-subunit
2005-08-20 Deleted SYNONYM importin, alpha-subunit transport factor
2005-08-20 Deleted SYNONYM importin, beta-subunit
2005-08-20 Deleted SYNONYM transportin
2005-08-10 Added SYNONYM RAN-binding protein
2005-08-10 Added SYNONYM exportin
2005-08-10 Added SYNONYM importin
2005-08-10 Added SYNONYM importin, alpha-subunit
2005-08-10 Added SYNONYM importin, alpha-subunit transport factor
2005-08-10 Added SYNONYM importin, beta-subunit
2005-08-10 Added SYNONYM transportin
2004-04-19 Added SYNONYM NPC
2004-04-19 Added SYNONYM nuclear pore complex
2004-04-19 Added SYNONYM nuclear pore membrane protein
2004-04-16 Deleted SYNONYM NPC
2004-04-16 Deleted SYNONYM nuclear pore complex
2004-04-16 Deleted SYNONYM nuclear pore membrane protein
2002-11-28 Added SYNONYM nuclear pore membrane protein
2002-11-28 Added SECONDARY GO:0005644 (nuclear pore membrane protein)
2002-02-06 Updated TERM nuclear pore
2001-08-06 Added DEFINITION Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined.
2001-04-03 Updated TERM nuclear pore
2001-03-30 Added SYNONYM NPC
2001-03-30 Added SYNONYM nuclear pore complex
2001-03-30 Added TERM nuclear pore

Term

Timestamp Action Category Detail
2002-02-06 Updated TERM nuclear pore
2001-04-03 Updated TERM nuclear pore
2001-03-30 Added TERM nuclear pore

Definition/synonyms

Timestamp Action Category Detail
2011-08-10 Added SYNONYM nucleopore
2008-05-13 Added DEFINITION Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined.
2008-05-12 Deleted DEFINITION Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined.
2007-08-09 Added SYNONYM NPC
2007-08-09 Added SYNONYM nuclear pore complex
2007-08-09 Added SYNONYM nuclear pore membrane protein
2007-08-09 Deleted SYNONYM NPC
2007-08-09 Deleted SYNONYM nuclear pore complex
2007-08-09 Deleted SYNONYM nuclear pore membrane protein
2005-08-20 Deleted SYNONYM RAN-binding protein
2005-08-20 Deleted SYNONYM exportin
2005-08-20 Deleted SYNONYM importin
2005-08-20 Deleted SYNONYM importin, alpha-subunit
2005-08-20 Deleted SYNONYM importin, alpha-subunit transport factor
2005-08-20 Deleted SYNONYM importin, beta-subunit
2005-08-20 Deleted SYNONYM transportin
2005-08-10 Added SYNONYM RAN-binding protein
2005-08-10 Added SYNONYM exportin
2005-08-10 Added SYNONYM importin
2005-08-10 Added SYNONYM importin, alpha-subunit
2005-08-10 Added SYNONYM importin, alpha-subunit transport factor
2005-08-10 Added SYNONYM importin, beta-subunit
2005-08-10 Added SYNONYM transportin
2004-04-19 Added SYNONYM NPC
2004-04-19 Added SYNONYM nuclear pore complex
2004-04-19 Added SYNONYM nuclear pore membrane protein
2004-04-16 Deleted SYNONYM NPC
2004-04-16 Deleted SYNONYM nuclear pore complex
2004-04-16 Deleted SYNONYM nuclear pore membrane protein
2002-11-28 Added SYNONYM nuclear pore membrane protein
2001-08-06 Added DEFINITION Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined.
2001-03-30 Added SYNONYM NPC
2001-03-30 Added SYNONYM nuclear pore complex

Relationships

Timestamp Action Category Detail
2009-12-10 Deleted RELATION is a GO:0043234 (protein complex)
2008-10-21 Added RELATION is a GO:0044428 (nuclear part)
2008-10-02 Added RELATION part of GO:0005635 (nuclear envelope)
2008-10-02 Deleted RELATION is a GO:0044453 (nuclear membrane part)
2008-04-01 Updated RELATION is a GO:0044453 (nuclear membrane part)
2008-04-01 Updated RELATION is a GO:0043234 (protein complex)
2008-04-01 Updated RELATION is a GO:0046930 (pore complex)

Cross-references

Timestamp Action Category Detail
2010-02-04 Added XREF NIF_Subcellular:sao220861693
2009-02-05 Added XREF Wikipedia:Nuclear_pore

Other

Timestamp Action Category Detail
2013-04-18 Updated SLIM goslim_pir
2008-06-09 Added SLIM goslim_pir
2002-11-28 Added SECONDARY GO:0005644 (nuclear pore membrane protein)
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