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GO:0005622 intracellular

Term Information

ID GO:0005622
Name intracellular
Ontology Cellular Component
Definition The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
GONUTS GO:0005622 Wiki Page

Synonyms

Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope. Click on the icon for more details.
Type Synonym
exact internal to cell
related protoplast
exact protoplasm
related nucleocytoplasm

Taxon Constraints

The use of this term should conform to the following taxon constraints:
Ancestor GO ID Ancestor GO Term Name Relationship Taxon ID Taxon Reference(s)
GO:0005623 cell only_in_taxon 131567 cellular organisms
More information on taxon constraints in GO is available here

GO Slims

This term is present in the following GO Consortium-maintained GO slims:
GO slim nameCount of all terms
goslim_generic149
goslim_pir462
goslim_plant100
goslim_chembl309

Cross-references

Database ID
InterPro IPR000039
InterPro IPR000054
InterPro IPR000077
InterPro IPR000178
InterPro IPR000196
InterPro IPR000206
InterPro IPR000231
InterPro IPR000244
InterPro IPR000266
InterPro IPR000271
InterPro IPR000289
InterPro IPR000307
InterPro IPR000315
InterPro IPR000456
InterPro IPR000473
InterPro IPR000509
InterPro IPR000530
InterPro IPR000552
InterPro IPR000554
InterPro IPR000589
InterPro IPR000592
InterPro IPR000597
InterPro IPR000751
InterPro IPR000819
InterPro IPR000831
InterPro IPR000876
InterPro IPR000890
InterPro IPR000892
InterPro IPR000915
InterPro IPR000948
InterPro IPR001034
InterPro IPR001047
InterPro IPR001071
InterPro IPR001132
InterPro IPR001141
InterPro IPR001147
InterPro IPR001196
InterPro IPR001197
InterPro IPR001209
InterPro IPR001210
InterPro IPR001300
InterPro IPR001377
InterPro IPR001380
InterPro IPR001383
InterPro IPR001515
InterPro IPR001569
InterPro IPR001578
InterPro IPR001593
InterPro IPR001648
InterPro IPR001666
InterPro IPR001684
InterPro IPR001705
InterPro IPR001713
InterPro IPR001780
InterPro IPR001787
InterPro IPR001790
InterPro IPR001801
InterPro IPR001813
InterPro IPR001816
InterPro IPR001854
InterPro IPR001857
InterPro IPR001859
InterPro IPR001865
InterPro IPR001892
InterPro IPR001909
InterPro IPR001912
InterPro IPR001931
InterPro IPR001976
InterPro IPR002075
InterPro IPR002108
InterPro IPR002121
InterPro IPR002150
InterPro IPR002171
InterPro IPR002358
InterPro IPR002359
InterPro IPR002363
InterPro IPR002583
InterPro IPR002671
InterPro IPR002672
InterPro IPR002673
InterPro IPR002674
InterPro IPR002675
InterPro IPR002784
InterPro IPR003256
InterPro IPR003508
InterPro IPR003578
InterPro IPR003619
InterPro IPR003649
InterPro IPR004152
InterPro IPR004223
InterPro IPR004389
InterPro IPR004520
InterPro IPR004540
InterPro IPR004541
InterPro IPR004544
InterPro IPR005484
InterPro IPR005485
InterPro IPR005568
InterPro IPR005662
InterPro IPR005813
InterPro IPR005825
InterPro IPR006032
InterPro IPR006687
InterPro IPR006722
InterPro IPR006846
InterPro IPR007740
InterPro IPR008195
InterPro IPR008283
InterPro IPR008656
InterPro IPR008932
InterPro IPR008937
InterPro IPR011331
InterPro IPR012678
InterPro IPR013019
InterPro IPR013790
InterPro IPR014039
InterPro IPR015972
InterPro IPR015973
InterPro IPR015974
InterPro IPR017127
InterPro IPR018079
InterPro IPR018101
InterPro IPR018254
InterPro IPR018255
InterPro IPR018256
InterPro IPR018257
InterPro IPR018258
InterPro IPR018259
InterPro IPR018260
InterPro IPR018261
InterPro IPR018262
InterPro IPR018263
InterPro IPR018264
InterPro IPR018265
InterPro IPR018266
InterPro IPR018267
InterPro IPR018268
InterPro IPR018273
InterPro IPR018275
InterPro IPR018277
InterPro IPR018278
InterPro IPR018279
InterPro IPR018281
InterPro IPR018282
InterPro IPR018283
InterPro IPR018334
InterPro IPR018335
InterPro IPR019888
InterPro IPR019927
InterPro IPR019928
InterPro IPR019958
InterPro IPR019961
InterPro IPR019977
InterPro IPR019978
InterPro IPR019979
InterPro IPR019980
InterPro IPR019981
InterPro IPR019984
InterPro IPR019985
InterPro IPR020052
InterPro IPR020083
InterPro IPR020592
InterPro IPR020594
InterPro IPR020798
InterPro IPR020847
InterPro IPR020848
InterPro IPR020919
InterPro IPR020925
InterPro IPR020926
InterPro IPR020929
InterPro IPR020930
InterPro IPR020939
InterPro IPR021132
InterPro IPR021137
InterPro IPR022481
InterPro IPR022666
InterPro IPR022684
InterPro IPR022804
InterPro IPR023438
InterPro IPR023454
InterPro IPR024156
InterPro IPR024865
InterPro IPR027491
InterPro IPR027493
InterPro IPR027500
InterPro IPR027534
InterPro IPR028387
UniProtKB-SubCell Protoplasm
Wikipedia Intracellular

Replaces

This term can be used instead of these obsolete terms:
GO Identifier GO Term Name Reason
GO:0000259 obsolete intracellular nucleoside transmembrane transporter activity CONSIDER GO:0005622
GO:0005377 obsolete intracellular copper ion transporter CONSIDER GO:0005622
GO:0008529 obsolete endogenous peptide receptor activity CONSIDER GO:0005622
GO:0019844 obsolete endotoxin activity CONSIDER GO:0005622

Ancestor Chart

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Child Terms

This table lists all terms that are direct descendants (child terms) of GO:0005622:
Relationship To GO:0005622 Child Term Child Term Name
Occurs in GO:0002818 intracellular defense response
Occurs in GO:0005057 receptor signaling protein activity
Occurs in GO:0006886 intracellular protein transport
Occurs in GO:0006896 Golgi to vacuole transport
Occurs in GO:0006913 nucleocytoplasmic transport
Occurs in GO:0015680 intracellular copper ion transport
Occurs in GO:0015859 intracellular nucleoside transport
Occurs in GO:0016482 cytoplasmic transport
Occurs in GO:0032365 intracellular lipid transport
Occurs in GO:0032366 intracellular sterol transport
Occurs in GO:0032367 intracellular cholesterol transport
Occurs in GO:0035556 intracellular signal transduction
Part of GO:0044424 intracellular part
Occurs in GO:0046907 intracellular transport
Occurs in GO:0048312 intracellular distribution of mitochondria
Occurs in GO:0075733 intracellular transport of virus
Occurs in GO:0080162 intracellular auxin transport
Occurs in GO:0097580 intracellular sequestering of copper ion
Occurs in GO:1902334 fructose export from vacuole to cytoplasm
Part of GO:1990302 Bre1-Rad6 ubiquitin ligase complex
Part of GO:1990303 UBR1-RAD6 ubiquitin ligase complex
Part of GO:1990304 MUB1-RAD6-UBR2 ubiquitin ligase complex
Part of GO:1990305 RAD6-UBR2 ubiquitin ligase complex
Part of GO:1990306 RSP5-BUL ubiquitin ligase complex
Occurs in GO:0065002 intracellular protein transmembrane transport
Occurs in GO:0045324 late endosome to vacuole transport

Protein Annotation

Displaying annotations FIRST to LAST of TOTAL Page size: Additional filters: Bookmarkable link
Database
Gene Product ID
Symbol
Qualifier
GO Identifier
GO Term Name
Aspect
Original GO ID
Original GO Term Name
Evidence
Reference
With
Taxon
Date
Assigned By
Product Form ID
Name
Synonym
Type
Taxon Name
Sequence

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ID Mapping

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Co-occurring Terms

These tables show the number of times the term listed in the table has been co-annotated with GO:0005622. The terms are listed in descending order of number of times the term has been co-annotated.
The table on the left is calculated using both electronic and manual-evidenced annotations, while the table on the right is calculated using only manual-evidenced annotations.
Co-occurrence statistics for GO:0005622 based on the entire annotation set Co-occurrence statistics for GO:0005622 based on non-IEA annotations only

Change Log

All changes

Timestamp Action Category Detail
2015-05-19 Added SLIM goslim_chembl
2015-05-19 Deleted SLIM goslim_ChEMBL
2015-05-11 Added SLIM goslim_ChEMBL
2014-09-25 Added RELATION has part GO:0097653 (unencapsulated part of cell)
2013-04-18 Updated SLIM goslim_plant
2013-04-18 Updated SLIM goslim_pir
2013-04-18 Updated SLIM goslim_generic
2011-03-18 Deleted SLIM goslim_goa
2010-02-13 Added SYNONYM protoplast
2010-01-31 Added SYNONYM nucleocytoplasm
2009-07-11 Added SYNONYM internal to cell
2009-02-05 Added XREF Wikipedia:Intracellular
2008-06-09 Added SLIM goslim_generic
2008-06-09 Added SLIM goslim_plant
2008-06-09 Added SLIM goslim_pir
2008-06-09 Added SLIM goslim_goa
2008-05-13 Added DEFINITION The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
2008-05-12 Deleted DEFINITION The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
2008-04-01 Updated RELATION is a GO:0044464 (cell part)
2007-08-09 Added SYNONYM protoplasm
2007-08-09 Deleted SYNONYM protoplasm
2005-08-20 Deleted SYNONYM endogenous peptide receptor activity
2005-08-20 Deleted SYNONYM endotoxin activity
2005-08-20 Deleted SYNONYM intracellular copper ion transporter
2005-08-20 Deleted SYNONYM intracellular nucleoside transporter activity
2005-08-10 Added SYNONYM endogenous peptide receptor activity
2005-08-10 Added SYNONYM endotoxin activity
2005-08-10 Added SYNONYM intracellular copper ion transporter
2005-08-10 Added SYNONYM intracellular nucleoside transporter activity
2004-09-29 Updated TERM intracellular
2004-04-19 Added SYNONYM protoplasm
2004-04-16 Deleted SYNONYM protoplasm
2003-03-26 Updated DEFINITION The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
2002-11-27 Added DEFINITION The living contents of a cell; the matter contained within the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
2002-02-06 Updated TERM intracellular
2001-08-01 Added SYNONYM protoplasm
2001-04-03 Updated TERM intracellular
2001-03-30 Added TERM intracellular

Term

Timestamp Action Category Detail
2004-09-29 Updated TERM intracellular
2002-02-06 Updated TERM intracellular
2001-04-03 Updated TERM intracellular
2001-03-30 Added TERM intracellular

Definition/synonyms

Timestamp Action Category Detail
2010-02-13 Added SYNONYM protoplast
2010-01-31 Added SYNONYM nucleocytoplasm
2009-07-11 Added SYNONYM internal to cell
2008-05-13 Added DEFINITION The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
2008-05-12 Deleted DEFINITION The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
2007-08-09 Added SYNONYM protoplasm
2007-08-09 Deleted SYNONYM protoplasm
2005-08-20 Deleted SYNONYM endogenous peptide receptor activity
2005-08-20 Deleted SYNONYM endotoxin activity
2005-08-20 Deleted SYNONYM intracellular copper ion transporter
2005-08-20 Deleted SYNONYM intracellular nucleoside transporter activity
2005-08-10 Added SYNONYM endogenous peptide receptor activity
2005-08-10 Added SYNONYM endotoxin activity
2005-08-10 Added SYNONYM intracellular copper ion transporter
2005-08-10 Added SYNONYM intracellular nucleoside transporter activity
2004-04-19 Added SYNONYM protoplasm
2004-04-16 Deleted SYNONYM protoplasm
2003-03-26 Updated DEFINITION The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
2002-11-27 Added DEFINITION The living contents of a cell; the matter contained within the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
2001-08-01 Added SYNONYM protoplasm

Relationships

Timestamp Action Category Detail
2014-09-25 Added RELATION has part GO:0097653 (unencapsulated part of cell)
2008-04-01 Updated RELATION is a GO:0044464 (cell part)

Cross-references

Timestamp Action Category Detail
2009-02-05 Added XREF Wikipedia:Intracellular

Other

Timestamp Action Category Detail
2015-05-19 Added SLIM goslim_chembl
2015-05-19 Deleted SLIM goslim_ChEMBL
2015-05-11 Added SLIM goslim_ChEMBL
2013-04-18 Updated SLIM goslim_plant
2013-04-18 Updated SLIM goslim_pir
2013-04-18 Updated SLIM goslim_generic
2011-03-18 Deleted SLIM goslim_goa
2008-06-09 Added SLIM goslim_generic
2008-06-09 Added SLIM goslim_plant
2008-06-09 Added SLIM goslim_pir
2008-06-09 Added SLIM goslim_goa
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