spacer

GO:0005501 retinoid binding

Term Information

ID GO:0005501
Name retinoid binding
Ontology Molecular Function
Definition Interacting selectively and non-covalently with retinoids, any member of a class of isoprenoids that contain or are derived from four prenyl groups linked head-to-tail. Retinoids include retinol and retinal and structurally similar natural derivatives or synthetic compounds, but need not have vitamin A activity.
GONUTS GO:0005501 Wiki Page

Annotation Guidance

Usage of this term is subject to the following annotation guidelines:
Annotation Guidelines
Binding term considerationsLink

Taxon Constraints

The use of this term should conform to the following taxon constraints:
Taxon Rule Ancestor GO ID Ancestor GO Term Name Relationship Taxon ID Taxon Reference(s)
GOTAX:0010020 GO:0005501 retinoid binding only_in_taxon 33208 Metazoa
More information on taxon constraints in GO is available here

Cross-Ontology Relations

Relation Other Ontology ID Term
has_input CHEBI CHEBI:26537 retinoid

Cross-references

Database ID
InterPro IPR002449

Ancestor Chart

This chart is interactive; you can click on the term boxes and legend for more information.
Display options
Display
Key
GO IDs
Term box width
Term box height
Slim colours
Show children
Image size limit (in megapixels)
Note that setting the limit too high may result in images being generated slowly; it may even cause the browser to crash. The maximum limit is 20 megapixels.

Child Terms

This table lists all terms that are direct descendants (child terms) of GO:0005501:
Relationship To GO:0005501 Child Term Child Term Name
Is a GO:0016918 retinal binding
Is a GO:0001972 retinoic acid binding
Is a GO:0019841 retinol binding
Is a GO:0046876 3,4-didehydroretinal binding

Protein Annotation

Displaying annotations FIRST to LAST of TOTAL Page size: Additional filters: Bookmarkable link
Database
Gene Product ID
Symbol
Qualifier
GO Identifier
GO Term Name
Aspect
Original GO ID
Original GO Term Name
Evidence
Reference
With
Taxon
Date
Assigned By
Product Form ID
Name
Synonym
Type
Taxon Name
Sequence

Export

Display options

ID Mapping

QuickGO maps between different identifier types by using a combination of mapping files provided by the databases, and using identifier cross-references supplied by UniProtKB.

If more than one identifier type needs to be used to map all required sequences, drag the selected databases to change the order in which identifiers are found.

Filter

Select

Grouped by
Annotation count
Protein count
Both

Co-occurring Terms

These tables show the number of times the term listed in the table has been co-annotated with GO:0005501. The terms are listed in descending order of number of times the term has been co-annotated.
The table on the left is calculated using both electronic and manual-evidenced annotations, while the table on the right is calculated using only manual-evidenced annotations.
Co-occurrence statistics for GO:0005501 based on the entire annotation set Co-occurrence statistics for GO:0005501 based on non-IEA annotations only

Change Log

All changes

Timestamp Action Category Detail
2009-07-03 Deleted DEFINITION Interacting selectively with retinoids, any member of a class of isoprenoids that contain or are derived from four prenyl groups linked head-to-tail. Retinoids include retinol and retinal and structurally similar natural derivatives or synthetic compounds, but need not have vitamin A activity.
2009-07-03 Added DEFINITION Interacting selectively and non-covalently with retinoids, any member of a class of isoprenoids that contain or are derived from four prenyl groups linked head-to-tail. Retinoids include retinol and retinal and structurally similar natural derivatives or synthetic compounds, but need not have vitamin A activity.
2008-05-13 Added DEFINITION Interacting selectively with retinoids, any member of a class of isoprenoids that contain or are derived from four prenyl groups linked head-to-tail. Retinoids include retinol and retinal and structurally similar natural derivatives or synthetic compounds, but need not have vitamin A activity.
2008-05-12 Deleted DEFINITION Interacting selectively with retinoids, any member of a class of isoprenoids that contain or are derived from four prenyl groups linked head-to-tail. Retinoids include retinol and retinal and structurally similar natural derivatives or synthetic compounds, but need not have vitamin A activity.
2008-04-01 Updated RELATION is a GO:0019840 (isoprenoid binding)
2004-10-08 Updated DEFINITION Interacting selectively with retinoids, any member of a class of isoprenoids that contain or are derived from four prenyl groups linked head-to-tail. Retinoids include retinol and retinal and structurally similar natural derivatives or synthetic compounds, but need not have vitamin A activity.
2003-06-10 Updated TERM retinoid binding
2003-03-26 Added DEFINITION Interacting selectively with retinoids, any member of a class of isoprenoids that contain or are derived from four prenyl groups linked head-to-tail.
2003-03-19 Updated TERM retinoid binding activity
2002-02-06 Updated TERM retinoid binding
2001-04-03 Updated TERM retinoid binding
2001-03-30 Added TERM retinoid binding

Term

Timestamp Action Category Detail
2003-06-10 Updated TERM retinoid binding
2003-03-19 Updated TERM retinoid binding activity
2002-02-06 Updated TERM retinoid binding
2001-04-03 Updated TERM retinoid binding
2001-03-30 Added TERM retinoid binding

Definition/synonyms

Timestamp Action Category Detail
2009-07-03 Deleted DEFINITION Interacting selectively with retinoids, any member of a class of isoprenoids that contain or are derived from four prenyl groups linked head-to-tail. Retinoids include retinol and retinal and structurally similar natural derivatives or synthetic compounds, but need not have vitamin A activity.
2009-07-03 Added DEFINITION Interacting selectively and non-covalently with retinoids, any member of a class of isoprenoids that contain or are derived from four prenyl groups linked head-to-tail. Retinoids include retinol and retinal and structurally similar natural derivatives or synthetic compounds, but need not have vitamin A activity.
2008-05-13 Added DEFINITION Interacting selectively with retinoids, any member of a class of isoprenoids that contain or are derived from four prenyl groups linked head-to-tail. Retinoids include retinol and retinal and structurally similar natural derivatives or synthetic compounds, but need not have vitamin A activity.
2008-05-12 Deleted DEFINITION Interacting selectively with retinoids, any member of a class of isoprenoids that contain or are derived from four prenyl groups linked head-to-tail. Retinoids include retinol and retinal and structurally similar natural derivatives or synthetic compounds, but need not have vitamin A activity.
2004-10-08 Updated DEFINITION Interacting selectively with retinoids, any member of a class of isoprenoids that contain or are derived from four prenyl groups linked head-to-tail. Retinoids include retinol and retinal and structurally similar natural derivatives or synthetic compounds, but need not have vitamin A activity.
2003-03-26 Added DEFINITION Interacting selectively with retinoids, any member of a class of isoprenoids that contain or are derived from four prenyl groups linked head-to-tail.

Relationships

Timestamp Action Category Detail
2008-04-01 Updated RELATION is a GO:0019840 (isoprenoid binding)
spacer
Please send comments, suggestions or bug reports to goa@ebi.ac.uk. Click here for details of how to cite UniProt-GOA and QuickGO.
11ms