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GO:0005488 binding

Term Information

ID GO:0005488
Name binding
Ontology Molecular Function
Definition The selective, non-covalent, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule.
Comment For ligands that bind to signal transducing receptors, consider the molecular function term 'receptor binding ; GO:0005102' and its children.
GONUTS GO:0005488 Wiki Page

Synonyms

Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope. Click on the icon for more details.
Type Synonym
narrow ligand

Annotation Guidance

Usage of this term is subject to the following annotation guidelines:
Annotation Guidelines
Binding term considerationsLink
GO Consortium QC check: Annotations to binding should be made with the IPI evidence code, and supply an interactor in the with fieldLink

GO Slims

This term is present in the following GO Consortium-maintained GO slims:
GO slim nameCount of all terms
goslim_pir462
goslim_plant100

Cross-references

Database ID
InterPro IPR002491
InterPro IPR016024
Wikipedia Binding_(molecular)

Ancestor Chart

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Child Terms

This table lists all terms that are direct descendants (child terms) of GO:0005488:
Relationship To GO:0005488 Child Term Child Term Name
Is a GO:0043167 ion binding
Is a GO:0043176 amine binding
Is a GO:0003823 antigen binding
Is a GO:0042562 hormone binding
Is a GO:0046904 calcium oxalate binding
Is a GO:0046790 virion binding
Is a GO:0046812 host cell surface binding
Is a GO:0046848 hydroxyapatite binding
Is a GO:0071814 protein-lipid complex binding
Is a GO:0048037 cofactor binding
Is a GO:0051540 metal cluster binding
Is a GO:0000035 acyl binding
Is a GO:0001871 pattern binding
Is a GO:0050997 quaternary ammonium group binding
Is a GO:0030246 carbohydrate binding
Is a GO:0042165 neurotransmitter binding
Is a GO:0031409 pigment binding
Is a GO:0003682 chromatin binding
Is a GO:0015643 toxic substance binding
Is a GO:0008144 drug binding
Is a GO:0008289 lipid binding
Is a GO:0043287 poly(3-hydroxyalkanoate) binding
Is a GO:0050436 microfibril binding
Is a GO:0050824 water binding
Is a GO:0050840 extracellular matrix binding
Is a GO:0008430 selenium binding
Is a GO:0005515 protein binding
Is a GO:0005549 odorant binding
Is a GO:0019825 oxygen binding
Is a GO:0043021 ribonucleoprotein complex binding
Is a GO:0060090 binding, bridging
Is a GO:0033218 amide binding
Regulates GO:0051098 regulation of binding
Positively regulates GO:0051099 positive regulation of binding
Negatively regulates GO:0051100 negative regulation of binding
Is a GO:0070026 nitric oxide binding
Is a GO:0072328 alkene binding
Is a GO:1901567 fatty acid derivative binding
Is a GO:1990458 lipooligosaccharide binding
Is a GO:0033226 2-aminoethylphosphonate binding
Is a GO:1901363 heterocyclic compound binding
Is a GO:0097243 flavonoid binding
Is a GO:0035923 flurbiprofen binding
Is a GO:0097367 carbohydrate derivative binding
Is a GO:1901681 sulfur compound binding
Is a GO:0019808 polyamine binding
Is a GO:0036094 small molecule binding
Is a GO:0097159 organic cyclic compound binding
Is a GO:1902670 carbon dioxide binding
Is a GO:0035730 S-nitrosoglutathione binding
Is a GO:0035731 dinitrosyl-iron complex binding

Protein Annotation

Displaying annotations FIRST to LAST of TOTAL Page size: Additional filters: Bookmarkable link
Database
Gene Product ID
Symbol
Qualifier
GO Identifier
GO Term Name
Aspect
Original GO ID
Original GO Term Name
Evidence
Reference
With
Taxon
Date
Assigned By
Product Form ID
Name
Synonym
Type
Taxon Name
Sequence

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Co-occurring Terms

These tables show the number of times the term listed in the table has been co-annotated with GO:0005488. The terms are listed in descending order of number of times the term has been co-annotated.
The table on the left is calculated using both electronic and manual-evidenced annotations, while the table on the right is calculated using only manual-evidenced annotations.
Co-occurrence statistics for GO:0005488 based on the entire annotation set Co-occurrence statistics for GO:0005488 based on non-IEA annotations only

Change Log

All changes

Timestamp Action Category Detail
2013-04-18 Updated SLIM goslim_plant
2013-04-18 Updated SLIM goslim_pir
2011-12-08 Deleted RELATION has part GO:0005040 (decoy death receptor activity)
2011-10-28 Added RELATION has part GO:0005040 (decoy death receptor activity)
2011-03-18 Deleted SLIM goslim_goa
2010-12-05 Deleted SLIM goslim_generic
2009-07-03 Deleted DEFINITION The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule.
2009-07-03 Added DEFINITION The selective, non-covalent, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule.
2009-02-25 Added XREF Wikipedia:Binding_(molecular)
2008-06-09 Added SLIM goslim_plant
2008-06-09 Added SLIM goslim_pir
2008-06-09 Added SLIM goslim_goa
2008-06-09 Added SLIM goslim_generic
2008-05-13 Added DEFINITION The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule.
2008-05-12 Deleted DEFINITION The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule.
2008-04-01 Updated RELATION is a GO:0003674 (molecular_function)
2007-08-09 Added SYNONYM ligand
2007-08-09 Deleted SYNONYM ligand
2007-04-20 Updated DEFINITION The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule.
2005-05-12 Updated DEFINITION The selective, often stoichiometric interaction of a molecule with one or more specific sites on another molecule.
2003-06-10 Updated TERM binding
2003-03-19 Updated TERM binding activity
2002-11-27 Added DEFINITION The selective and stoichiometric interaction of a molecule with one or more specific sites on another molecule.
2002-10-25 Added SYNONYM ligand
2002-07-23 Updated TERM binding
2001-04-03 Updated TERM ligand binding or carrier
2001-03-30 Added TERM ligand binding or carrier

Term

Timestamp Action Category Detail
2003-06-10 Updated TERM binding
2003-03-19 Updated TERM binding activity
2002-07-23 Updated TERM binding
2001-04-03 Updated TERM ligand binding or carrier
2001-03-30 Added TERM ligand binding or carrier

Definition/synonyms

Timestamp Action Category Detail
2009-07-03 Deleted DEFINITION The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule.
2009-07-03 Added DEFINITION The selective, non-covalent, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule.
2008-05-13 Added DEFINITION The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule.
2008-05-12 Deleted DEFINITION The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule.
2007-08-09 Added SYNONYM ligand
2007-08-09 Deleted SYNONYM ligand
2007-04-20 Updated DEFINITION The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule.
2005-05-12 Updated DEFINITION The selective, often stoichiometric interaction of a molecule with one or more specific sites on another molecule.
2002-11-27 Added DEFINITION The selective and stoichiometric interaction of a molecule with one or more specific sites on another molecule.
2002-10-25 Added SYNONYM ligand

Relationships

Timestamp Action Category Detail
2011-12-08 Deleted RELATION has part GO:0005040 (decoy death receptor activity)
2011-10-28 Added RELATION has part GO:0005040 (decoy death receptor activity)
2008-04-01 Updated RELATION is a GO:0003674 (molecular_function)

Cross-references

Timestamp Action Category Detail
2009-02-25 Added XREF Wikipedia:Binding_(molecular)

Other

Timestamp Action Category Detail
2013-04-18 Updated SLIM goslim_plant
2013-04-18 Updated SLIM goslim_pir
2011-03-18 Deleted SLIM goslim_goa
2010-12-05 Deleted SLIM goslim_generic
2008-06-09 Added SLIM goslim_plant
2008-06-09 Added SLIM goslim_pir
2008-06-09 Added SLIM goslim_goa
2008-06-09 Added SLIM goslim_generic
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