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GO:0003972 RNA ligase (ATP) activity

Term Information

ID GO:0003972
Name RNA ligase (ATP) activity
Ontology Molecular Function
Definition Catalysis of the reaction: ATP + ribonucleotide(n) + ribonucleotide(m) = AMP + diphosphate + ribonucleotide(n+m).
GONUTS GO:0003972 Wiki Page

Synonyms

Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope. Click on the icon for more details.
Type Synonym
broad ribonucleic ligase activity
exact polyribonucleotide synthase (ATP) activity
exact polyribonucleotide ligase activity
exact poly(ribonucleotide):poly(ribonucleotide) ligase (AMP-forming)

Annotation Guidance

Usage of this term is subject to the following annotation guidelines:
Annotation Guidelines
Annotating to catalytic activities using the IPI evidence codeLink
Describing enzyme functions that catalyse multi-stage reactionsLink

Cross-references

Database ID
EC 6.5.1.3
InterPro IPR012387
InterPro IPR012647
InterPro IPR015965
InterPro IPR015966
InterPro IPR027513
MetaCyc RNA-LIGASE-ATP-RXN

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Child Terms

This table lists all terms that are direct descendants (child terms) of GO:0003972:
Term has no children

Protein Annotation

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Co-occurring Terms

These tables show the number of times the term listed in the table has been co-annotated with GO:0003972. The terms are listed in descending order of number of times the term has been co-annotated.
The table on the left is calculated using both electronic and manual-evidenced annotations, while the table on the right is calculated using only manual-evidenced annotations.
Co-occurrence statistics for GO:0003972 based on the entire annotation set Co-occurrence statistics for GO:0003972 based on non-IEA annotations only

Change Log

All changes

Timestamp Action Category Detail
2010-09-03 Deleted DEFINITION Catalysis of the reaction: ATP + ribonucleotide (n) + ribonucleotide (m) = AMP + diphosphate + ribonucleotide (n+m).
2010-09-03 Added DEFINITION Catalysis of the reaction: ATP + ribonucleotide(n) + ribonucleotide(m) = AMP + diphosphate + ribonucleotide(n+m).
2009-05-21 Deleted XREF MetaCyc:RNA-LIGASE-(ATP)-RXN
2009-05-21 Added XREF MetaCyc:RNA-LIGASE-ATP-RXN
2008-05-13 Added DEFINITION Catalysis of the reaction: ATP + ribonucleotide (n) + ribonucleotide (m) = AMP + diphosphate + ribonucleotide (n+m).
2008-05-12 Deleted DEFINITION Catalysis of the reaction: ATP + ribonucleotide (n) + ribonucleotide (m) = AMP + diphosphate + ribonucleotide (n+m).
2008-04-01 Updated RELATION is a GO:0008452 (RNA ligase activity)
2007-11-08 Added SYNONYM poly(ribonucleotide):poly(ribonucleotide) ligase (AMP-forming)
2007-11-08 Added SYNONYM polyribonucleotide ligase activity
2007-09-06 Added SYNONYM polyribonucleotide synthase (ATP) activity
2007-09-06 Added SYNONYM ribonucleic ligase activity
2003-10-27 Added XREF MetaCyc:RNA-LIGASE-(ATP)-RXN
2003-03-19 Updated TERM RNA ligase (ATP) activity
2002-11-27 Added DEFINITION Catalysis of the reaction: ATP + ribonucleotide (n) + ribonucleotide (m) = AMP + diphosphate + ribonucleotide (n+m).
2002-02-06 Updated TERM RNA ligase (ATP)
2001-04-03 Updated TERM RNA ligase (ATP)
2001-03-30 Added XREF EC:6.5.1.3
2001-03-30 Added TERM RNA ligase (ATP)

Term

Timestamp Action Category Detail
2003-03-19 Updated TERM RNA ligase (ATP) activity
2002-02-06 Updated TERM RNA ligase (ATP)
2001-04-03 Updated TERM RNA ligase (ATP)
2001-03-30 Added TERM RNA ligase (ATP)

Definition/synonyms

Timestamp Action Category Detail
2010-09-03 Deleted DEFINITION Catalysis of the reaction: ATP + ribonucleotide (n) + ribonucleotide (m) = AMP + diphosphate + ribonucleotide (n+m).
2010-09-03 Added DEFINITION Catalysis of the reaction: ATP + ribonucleotide(n) + ribonucleotide(m) = AMP + diphosphate + ribonucleotide(n+m).
2008-05-13 Added DEFINITION Catalysis of the reaction: ATP + ribonucleotide (n) + ribonucleotide (m) = AMP + diphosphate + ribonucleotide (n+m).
2008-05-12 Deleted DEFINITION Catalysis of the reaction: ATP + ribonucleotide (n) + ribonucleotide (m) = AMP + diphosphate + ribonucleotide (n+m).
2007-11-08 Added SYNONYM poly(ribonucleotide):poly(ribonucleotide) ligase (AMP-forming)
2007-11-08 Added SYNONYM polyribonucleotide ligase activity
2007-09-06 Added SYNONYM polyribonucleotide synthase (ATP) activity
2007-09-06 Added SYNONYM ribonucleic ligase activity
2002-11-27 Added DEFINITION Catalysis of the reaction: ATP + ribonucleotide (n) + ribonucleotide (m) = AMP + diphosphate + ribonucleotide (n+m).

Relationships

Timestamp Action Category Detail
2008-04-01 Updated RELATION is a GO:0008452 (RNA ligase activity)

Cross-references

Timestamp Action Category Detail
2009-05-21 Deleted XREF MetaCyc:RNA-LIGASE-(ATP)-RXN
2009-05-21 Added XREF MetaCyc:RNA-LIGASE-ATP-RXN
2003-10-27 Added XREF MetaCyc:RNA-LIGASE-(ATP)-RXN
2001-03-30 Added XREF EC:6.5.1.3
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