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GO:0003729 mRNA binding

Term Information

ID GO:0003729
Name mRNA binding
Ontology Molecular Function
Definition Interacting selectively and non-covalently with messenger RNA (mRNA), an intermediate molecule between DNA and protein. mRNA includes UTR and coding sequences, but does not contain introns.
GONUTS GO:0003729 Wiki Page

Annotation Guidance

Usage of this term is subject to the following annotation guidelines:
Annotation Guidelines
Binding term considerationsLink

GO Slims

This term is present in the following GO Consortium-maintained GO slims:
GO slim nameCount of all terms
goslim_generic149
goslim_yeast169
goslim_chembl309

Cross-Ontology Relations

Relation Other Ontology ID Term
has_input CHEBI CHEBI:33699 messenger RNA

Cross-references

Database ID
InterPro IPR004882
InterPro IPR009782
InterPro IPR012933
InterPro IPR016706
InterPro IPR026502
InterPro IPR028743
InterPro IPR029538
InterPro IPR030216

Ancestor Chart

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Child Terms

This table lists all terms that are direct descendants (child terms) of GO:0003729:
Relationship To GO:0003729 Child Term Child Term Name
Is a GO:0048027 mRNA 5'-UTR binding
Is a GO:0003730 mRNA 3'-UTR binding
Is a GO:0030350 iron-responsive element binding
Is a GO:0035368 selenocysteine insertion sequence binding
Is a GO:1990715 mRNA CDS binding
Regulates GO:1902415 regulation of mRNA binding
Positively regulates GO:1902416 positive regulation of mRNA binding
Is a GO:1903231 mRNA binding involved in posttranscriptional gene silencing

Protein Annotation

Displaying annotations FIRST to LAST of TOTAL Page size: Additional filters: Bookmarkable link
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Gene Product ID
Symbol
Qualifier
GO Identifier
GO Term Name
Aspect
Original GO ID
Original GO Term Name
Evidence
Reference
With
Taxon
Date
Assigned By
Product Form ID
Name
Synonym
Type
Taxon Name
Sequence

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Co-occurring Terms

These tables show the number of times the term listed in the table has been co-annotated with GO:0003729. The terms are listed in descending order of number of times the term has been co-annotated.
The table on the left is calculated using both electronic and manual-evidenced annotations, while the table on the right is calculated using only manual-evidenced annotations.
Co-occurrence statistics for GO:0003729 based on the entire annotation set Co-occurrence statistics for GO:0003729 based on non-IEA annotations only

Change Log

All changes

Timestamp Action Category Detail
2015-05-19 Added SLIM goslim_chembl
2015-05-19 Deleted SLIM goslim_ChEMBL
2015-05-11 Added SLIM goslim_ChEMBL
2014-02-01 Added RELATION is a GO:0044822 (poly(A) RNA binding)
2014-02-01 Deleted RELATION is a GO:0003723 (RNA binding)
2013-04-18 Updated SLIM goslim_yeast
2013-04-18 Updated SLIM goslim_generic
2012-02-10 Added SLIM goslim_generic
2011-09-18 Deleted DEFINITION Interacting selectively and non-covalently with pre-messenger RNA (pre-mRNA) or messenger RNA (mRNA).
2011-09-18 Added DEFINITION Interacting selectively and non-covalently with messenger RNA (mRNA), an intermediate molecule between DNA and protein. mRNA includes UTR and coding sequences, but does not contain introns.
2011-08-14 Added SLIM goslim_yeast
2009-07-03 Deleted DEFINITION Interacting selectively with pre-messenger RNA (pre-mRNA) or messenger RNA (mRNA).
2009-07-03 Added DEFINITION Interacting selectively and non-covalently with pre-messenger RNA (pre-mRNA) or messenger RNA (mRNA).
2008-05-13 Added DEFINITION Interacting selectively with pre-messenger RNA (pre-mRNA) or messenger RNA (mRNA).
2008-05-12 Deleted DEFINITION Interacting selectively with pre-messenger RNA (pre-mRNA) or messenger RNA (mRNA).
2008-04-01 Updated RELATION is a GO:0003723 (RNA binding)
2003-06-10 Updated TERM mRNA binding
2003-03-26 Added DEFINITION Interacting selectively with pre-messenger RNA (pre-mRNA) or messenger RNA (mRNA).
2003-03-19 Updated TERM mRNA binding activity
2002-02-06 Updated TERM mRNA binding
2001-04-03 Updated TERM mRNA binding
2001-03-30 Added TERM mRNA binding

Term

Timestamp Action Category Detail
2003-06-10 Updated TERM mRNA binding
2003-03-19 Updated TERM mRNA binding activity
2002-02-06 Updated TERM mRNA binding
2001-04-03 Updated TERM mRNA binding
2001-03-30 Added TERM mRNA binding

Definition/synonyms

Timestamp Action Category Detail
2011-09-18 Deleted DEFINITION Interacting selectively and non-covalently with pre-messenger RNA (pre-mRNA) or messenger RNA (mRNA).
2011-09-18 Added DEFINITION Interacting selectively and non-covalently with messenger RNA (mRNA), an intermediate molecule between DNA and protein. mRNA includes UTR and coding sequences, but does not contain introns.
2009-07-03 Deleted DEFINITION Interacting selectively with pre-messenger RNA (pre-mRNA) or messenger RNA (mRNA).
2009-07-03 Added DEFINITION Interacting selectively and non-covalently with pre-messenger RNA (pre-mRNA) or messenger RNA (mRNA).
2008-05-13 Added DEFINITION Interacting selectively with pre-messenger RNA (pre-mRNA) or messenger RNA (mRNA).
2008-05-12 Deleted DEFINITION Interacting selectively with pre-messenger RNA (pre-mRNA) or messenger RNA (mRNA).
2003-03-26 Added DEFINITION Interacting selectively with pre-messenger RNA (pre-mRNA) or messenger RNA (mRNA).

Relationships

Timestamp Action Category Detail
2014-02-01 Added RELATION is a GO:0044822 (poly(A) RNA binding)
2014-02-01 Deleted RELATION is a GO:0003723 (RNA binding)
2008-04-01 Updated RELATION is a GO:0003723 (RNA binding)

Other

Timestamp Action Category Detail
2015-05-19 Added SLIM goslim_chembl
2015-05-19 Deleted SLIM goslim_ChEMBL
2015-05-11 Added SLIM goslim_ChEMBL
2013-04-18 Updated SLIM goslim_yeast
2013-04-18 Updated SLIM goslim_generic
2012-02-10 Added SLIM goslim_generic
2011-08-14 Added SLIM goslim_yeast
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