spacer
spacer
Type a query for QuickGO...
You can reach the search box using alt+9 (Win/IE), alt+shift+9 (Win/Firefox) or ctrl+9 (Mac)
EBIDatabasesQuickGO

GO:0003723 RNA binding

Interacting selectively and non-covalently with an RNA molecule or a portion thereof.

Term Information

ID GO:0003723
Name RNA binding
Ontology Molecular Function
Definition Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
Comment

GO Slims

This term is present in the following GO Consortium-maintained GO slims:
GO slim nameCount of all terms
goslim_candida91
goslim_generic127
goslim_plant102
goslim_yeast93

Cross-references associated with this term:

Database ID
INTERPRO IPR016848
INTERPRO IPR002730
INTERPRO IPR011488
INTERPRO IPR011907
INTERPRO IPR001591
INTERPRO IPR002581
INTERPRO IPR002583
INTERPRO IPR002588
INTERPRO IPR002646
INTERPRO IPR002649
INTERPRO IPR002693
INTERPRO IPR002702
INTERPRO IPR004044
INTERPRO IPR004087
INTERPRO IPR004088
INTERPRO IPR009019
INTERPRO IPR016400
INTERPRO IPR005878
INTERPRO IPR005879
INTERPRO IPR005880
INTERPRO IPR009469
INTERPRO IPR012541
INTERPRO IPR000824
INTERPRO IPR002873
INTERPRO IPR015847
INTERPRO IPR015848
INTERPRO IPR019977
INTERPRO IPR004025
INTERPRO IPR016191
INTERPRO IPR004538
INTERPRO IPR009179
INTERPRO IPR001887
INTERPRO IPR001892
INTERPRO IPR001900
INTERPRO IPR007010
INTERPRO IPR009145
INTERPRO IPR000999
INTERPRO IPR006116
INTERPRO IPR006117
INTERPRO IPR002905
INTERPRO IPR002942
INTERPRO IPR017705
INTERPRO IPR015047
INTERPRO IPR014944
INTERPRO IPR005662
INTERPRO IPR005147
INTERPRO IPR011400
INTERPRO IPR013590
INTERPRO IPR015820
INTERPRO IPR008858
INTERPRO IPR006027
INTERPRO IPR006224
INTERPRO IPR006196
INTERPRO IPR005001
INTERPRO IPR001009
INTERPRO IPR003029
INTERPRO IPR005146
INTERPRO IPR018496
INTERPRO IPR004510
INTERPRO IPR006225
INTERPRO IPR014789
INTERPRO IPR000605
INTERPRO IPR000606
INTERPRO IPR000607
INTERPRO IPR000692
INTERPRO IPR018268
INTERPRO IPR018269
INTERPRO IPR018280
INTERPRO IPR019770
INTERPRO IPR001537
INTERPRO IPR001550
INTERPRO IPR001561
INTERPRO IPR001566
INTERPRO IPR001568
INTERPRO IPR012162
INTERPRO IPR018258
INTERPRO IPR015240
INTERPRO IPR015225
INTERPRO IPR014780
INTERPRO IPR001406
INTERPRO IPR019980
INTERPRO IPR002466
INTERPRO IPR002478
INTERPRO IPR002506
INTERPRO IPR014720
INTERPRO IPR013810
INTERPRO IPR010206
INTERPRO IPR010213
INTERPRO IPR010304
INTERPRO IPR012915
INTERPRO IPR012959
INTERPRO IPR009522
INTERPRO IPR000477
INTERPRO IPR016075
INTERPRO IPR001787
INTERPRO IPR001788
INTERPRO IPR001795
INTERPRO IPR001850
INTERPRO IPR003668
INTERPRO IPR003751
INTERPRO IPR006509
INTERPRO IPR006515
INTERPRO IPR006529
INTERPRO IPR006536
INTERPRO IPR001890
INTERPRO IPR017924
INTERPRO IPR018188
INTERPRO IPR018995
INTERPRO IPR017091
INTERPRO IPR000748
INTERPRO IPR006145
INTERPRO IPR020103
INTERPRO IPR020094
INTERPRO IPR020095
INTERPRO IPR020097
INTERPRO IPR011760
INTERPRO IPR020119
INTERPRO IPR001656
INTERPRO IPR015799
INTERPRO IPR015423
INTERPRO IPR013188
INTERPRO IPR008723
INTERPRO IPR001205
INTERPRO IPR007097
INTERPRO IPR012222
INTERPRO IPR011068
INTERPRO IPR015191
INTERPRO IPR014822
INTERPRO IPR001884
INTERPRO IPR020189
INTERPRO IPR019769
INTERPRO IPR006548
INTERPRO IPR006546
INTERPRO IPR008395
INTERPRO IPR001247
INTERPRO IPR003224
INTERPRO IPR018111
INTERPRO IPR002143
INTERPRO IPR002004
INTERPRO IPR015190
INTERPRO IPR004535
INTERPRO IPR011113
INTERPRO IPR012006
INTERPRO IPR001016
INTERPRO IPR001040
INTERPRO IPR000026
INTERPRO IPR000037
INTERPRO IPR000061
INTERPRO IPR000110
INTERPRO IPR000123
INTERPRO IPR009105
INTERPRO IPR011804
INTERPRO IPR011805
INTERPRO IPR003286
INTERPRO IPR008705
INTERPRO IPR001313
INTERPRO IPR001352
INTERPRO IPR012562
INTERPRO IPR018314
INTERPRO IPR016304
INTERPRO IPR013795
INTERPRO IPR007722
INTERPRO IPR001587
INTERPRO IPR004613
INTERPRO IPR000256
INTERPRO IPR002148
INTERPRO IPR007779
INTERPRO IPR015971
INTERPRO IPR002343
INTERPRO IPR002344
INTERPRO IPR004476
INTERPRO IPR005812
INTERPRO IPR005813
INTERPRO IPR007610
INTERPRO IPR011023
INTERPRO IPR008229
INTERPRO IPR004341
INTERPRO IPR007602
INTERPRO IPR002166
INTERPRO IPR008744
INTERPRO IPR008111

Web service: term information

Use this URI template to access this data as a service:

GTerm?id=termID&format=format

Full details can be found on the QuickGO Web Services page.

Ancestor Chart

Visual display of a section of the GO directed acyclic graph (DAG) for a single GO term. Terms in the GO are linked to parent (more general) terms and often to child (more specific) terms by one or more 'relationships'

All GO terms displayed in this graph can be clicked to display term definitions and child (descendent) terms.

Chart

Ancestor Table

Alternative display of a section of the GO, providing a concise view of the relationships connecting GO terms

All GO terms displayed in this chart can be right-clicked to display term definitions and child (descendent) terms.

GO:0003674 molecular_function
GO:0005488 binding
GO:0003676 nucleic acid binding
GO:0003723 RNA binding

Relationship key

Code Relationship
part of
is a
regulates
+ve regulates
-ve regulates

Child Terms

All direct descendants (child terms) available for this GO term:
I GO:0035197 siRNA binding
I GO:0035198 miRNA binding
I GO:0000339 RNA cap binding
I GO:0017069 snRNA binding
I GO:0017091 AU-rich element binding
I GO:0030515 snoRNA binding
I GO:0000049 tRNA binding
I GO:0003725 double-stranded RNA binding
I GO:0003727 single-stranded RNA binding
I GO:0003729 mRNA binding
I GO:0002151 G-quadruplex RNA binding
I GO:0042835 BRE binding
I GO:0008312 7S RNA binding
I GO:0019843 rRNA binding
I GO:0034336 misfolded RNA binding
I GO:0070883 pre-miRNA binding
I GO:0070878 pri-miRNA binding
I GO:0033204 ribonuclease P RNA binding
I GO:0070034 telomeric RNA binding
I GO:0034583 21U-RNA binding
I GO:0034584 piRNA binding
I GO:0000498 base pairing with RNA

Relationship key

CodeRelationship
Ppart of
Iis a

Protein Annotation

DB
ID
Qualifier colocalizes_with contributes_to NOT NOT|colocalizes_with NOT|contributes_to
GO Term
Reference
Evidence IMP IGI IPI IGC ISS IDA IEP IEA TAS NAS ND IC RCA ISA EXP
With
Taxonomy
From
Download limit
Format

Co-occurring Terms

Co-occurrence statistics

This display shows those GO terms which have been annotated to the same proteins as this term.
Terms may have been co-annotated either by electronic (IEA) or manual annotation methods. Users can decide which evidence code type should be used in the calculation of the co-occurence statistics.
Click on the 'Update' button to run the co-occurence calculation
IMP IGI IPI IGC ISS IDA IEP IEA TAS NAS ND IC RCA ISA EXP Statistics may take up to 1 minute to calculate
spacer
15ms
Stand-alone
Hostnametomcat-7.ebi.ac.uk
Uptime16:38 12/10/2009
Data version2009-11-20-04-03-08
Terminal
spacer