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GO:0003723 RNA binding

Term Information

ID GO:0003723
Name RNA binding
Ontology Molecular Function
Definition Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
Secondary IDs GO:0044822
GONUTS GO:0003723 Wiki Page

Synonyms

Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope. Click on the icon for more details.
Type Synonym
related poly(A)-RNA binding
related poly-A RNA binding
related poly(A) RNA binding

Annotation Guidance

Usage of this term is subject to the following annotation guidelines:
Annotation Guidelines
Binding term considerationsLink

GO Slims

This term is present in the following GO Consortium-maintained GO slims:
GO slim nameCount of all terms
goslim_agr38
goslim_mouse45
goslim_chembl309
goslim_aspergillus84
goslim_generic149
goslim_yeast168
goslim_plant98
goslim_candida88

Cross-Ontology Relations

Relation Other Ontology ID Term
has_input CHEBI CHEBI:33697 ribonucleic acid

Cross-references

Database ID
InterPro IPR000026
InterPro IPR000037
InterPro IPR000061
InterPro IPR000110
InterPro IPR000123
InterPro IPR000256
InterPro IPR000605
InterPro IPR000607
InterPro IPR000692
InterPro IPR000748
InterPro IPR000824
InterPro IPR001009
InterPro IPR001040
InterPro IPR001205
InterPro IPR001313
InterPro IPR001352
InterPro IPR001406
InterPro IPR001537
InterPro IPR001550
InterPro IPR001561
InterPro IPR001566
InterPro IPR001568
InterPro IPR001591
InterPro IPR001656
InterPro IPR001787
InterPro IPR001788
InterPro IPR001795
InterPro IPR001850
InterPro IPR001884
InterPro IPR001887
InterPro IPR001890
InterPro IPR001892
InterPro IPR001900
InterPro IPR002004
InterPro IPR002143
InterPro IPR002148
InterPro IPR002166
InterPro IPR002343
InterPro IPR002344
InterPro IPR002415
InterPro IPR002466
InterPro IPR002478
InterPro IPR002506
InterPro IPR002583
InterPro IPR002588
InterPro IPR002646
InterPro IPR002681
InterPro IPR002693
InterPro IPR002702
InterPro IPR002730
InterPro IPR002873
InterPro IPR002905
InterPro IPR002942
InterPro IPR003224
InterPro IPR003286
InterPro IPR003652
InterPro IPR003668
InterPro IPR003751
InterPro IPR003890
InterPro IPR004025
InterPro IPR004044
InterPro IPR004088
InterPro IPR004114
InterPro IPR004341
InterPro IPR004476
InterPro IPR004521
InterPro IPR004535
InterPro IPR004538
InterPro IPR004613
InterPro IPR004659
InterPro IPR004665
InterPro IPR004930
InterPro IPR005001
InterPro IPR005146
InterPro IPR005147
InterPro IPR005231
InterPro IPR005561
InterPro IPR005662
InterPro IPR005878
InterPro IPR005879
InterPro IPR005880
InterPro IPR006027
InterPro IPR006116
InterPro IPR006117
InterPro IPR006145
InterPro IPR006196
InterPro IPR006224
InterPro IPR006225
InterPro IPR006509
InterPro IPR006515
InterPro IPR006529
InterPro IPR006536
InterPro IPR006546
InterPro IPR006548
InterPro IPR007010
InterPro IPR007097
InterPro IPR007275
InterPro IPR007602
InterPro IPR007610
InterPro IPR007722
InterPro IPR007779
InterPro IPR008111
InterPro IPR008229
InterPro IPR008705
InterPro IPR008723
InterPro IPR008744
InterPro IPR008858
InterPro IPR009019
InterPro IPR009105
InterPro IPR009145
InterPro IPR009179
InterPro IPR009469
InterPro IPR009472
InterPro IPR009522
InterPro IPR010147
InterPro IPR010206
InterPro IPR010213
InterPro IPR010304
InterPro IPR011023
InterPro IPR011068
InterPro IPR011113
InterPro IPR011400
InterPro IPR011488
InterPro IPR011760
InterPro IPR011804
InterPro IPR011805
InterPro IPR011907
InterPro IPR012006
InterPro IPR012162
InterPro IPR012541
InterPro IPR012562
InterPro IPR012915
InterPro IPR012959
InterPro IPR013188
InterPro IPR013795
InterPro IPR013810
InterPro IPR014780
InterPro IPR014789
InterPro IPR014822
InterPro IPR014886
InterPro IPR014944
InterPro IPR015190
InterPro IPR015191
InterPro IPR015225
InterPro IPR015240
InterPro IPR015245
InterPro IPR015327
InterPro IPR015799
InterPro IPR015820
InterPro IPR015848
InterPro IPR015971
InterPro IPR016075
InterPro IPR016094
InterPro IPR016191
InterPro IPR016304
InterPro IPR016400
InterPro IPR016424
InterPro IPR016438
InterPro IPR016730
InterPro IPR016848
InterPro IPR017091
InterPro IPR017325
InterPro IPR017705
InterPro IPR017924
InterPro IPR018188
InterPro IPR018258
InterPro IPR018268
InterPro IPR018269
InterPro IPR018314
InterPro IPR018496
InterPro IPR018995
InterPro IPR019307
InterPro IPR019495
InterPro IPR019582
InterPro IPR019769
InterPro IPR019770
InterPro IPR019977
InterPro IPR019980
InterPro IPR020094
InterPro IPR020095
InterPro IPR020097
InterPro IPR020103
InterPro IPR020119
InterPro IPR020189
InterPro IPR020606
InterPro IPR020813
InterPro IPR020883
InterPro IPR020934
InterPro IPR022034
InterPro IPR022481
InterPro IPR023342
InterPro IPR023529
InterPro IPR023669
InterPro IPR023672
InterPro IPR023676
InterPro IPR024261
InterPro IPR024667
InterPro IPR025249
InterPro IPR025911
InterPro IPR026632
InterPro IPR026699
InterPro IPR027516
InterPro IPR028271
InterPro IPR028544
InterPro IPR028806
InterPro IPR029344
InterPro IPR030446
InterPro IPR030500
InterPro IPR030844
InterPro IPR030879
InterPro IPR031096
InterPro IPR031150
InterPro IPR031776
InterPro IPR032005
InterPro IPR032747
InterPro IPR032922
InterPro IPR033086
InterPro IPR033087
InterPro IPR033088
InterPro IPR033090
InterPro IPR033092
InterPro IPR033103
InterPro IPR033104
InterPro IPR033105
InterPro IPR033106
InterPro IPR033107
InterPro IPR033109
InterPro IPR033110
InterPro IPR033133
InterPro IPR033262
InterPro IPR033712
InterPro IPR033956
InterPro IPR034123
InterPro IPR034125
InterPro IPR034126
InterPro IPR034130
InterPro IPR034131
InterPro IPR034134
InterPro IPR034167
InterPro IPR034168
InterPro IPR034181
InterPro IPR034200
InterPro IPR034237
InterPro IPR034326
InterPro IPR034374
InterPro IPR034375
InterPro IPR034376
InterPro IPR034404
InterPro IPR034407
InterPro IPR034415
InterPro IPR034442
InterPro IPR034459
InterPro IPR034494
InterPro IPR034501
InterPro IPR034520
InterPro IPR034648
InterPro IPR034652
InterPro IPR034656
InterPro IPR034785
InterPro IPR034870
InterPro IPR034875
InterPro IPR034878
InterPro IPR034886
InterPro IPR034893
InterPro IPR034894
InterPro IPR034911
InterPro IPR035000
UniProtKB-KW RNA-binding

Ancestor Chart

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Child Terms

This table lists all terms that are direct descendants (child terms) of GO:0003723:
Relationship To GO:0003723 Child Term Child Term Name
Is a GO:0035197 siRNA binding
Is a GO:0035198 miRNA binding
Is a GO:0000339 RNA cap binding
Is a GO:0035613 RNA stem-loop binding
Is a GO:0017069 snRNA binding
Is a GO:0017091 AU-rich element binding
Is a GO:0030515 snoRNA binding
Is a GO:0000049 tRNA binding
Is a GO:0003725 double-stranded RNA binding
Is a GO:0003727 single-stranded RNA binding
Is a GO:0002151 G-quadruplex RNA binding
Is a GO:0042835 BRE binding
Is a GO:0008312 7S RNA binding
Is a GO:0019843 rRNA binding
Is a GO:0034336 misfolded RNA binding
Is a GO:0070883 pre-miRNA binding
Is a GO:0070878 primary miRNA binding
Is a GO:0033204 ribonuclease P RNA binding
Is a GO:0070034 telomerase RNA binding
Is a GO:1990605 GU repeat RNA binding
Is a GO:0001069 regulatory region RNA binding
Is a GO:0008135 translation factor activity, RNA binding
Is a GO:0071208 histone pre-mRNA DCP binding
Is a GO:0034583 21U-RNA binding
Is a GO:0034584 piRNA binding
Is a GO:0000498 base pairing with RNA
Is a GO:1990247 N6-methyladenosine-containing RNA binding
Is a GO:0036002 pre-mRNA binding
Regulates GO:1905214 regulation of RNA binding
Negatively regulates GO:1905215 negative regulation of RNA binding
Positively regulates GO:1905216 positive regulation of RNA binding
Is a GO:0003729 mRNA binding
Is a GO:0061752 telomeric repeat-containing RNA binding
Is a GO:1904678 alpha-aminoacyl-tRNA binding
Capable of GO:0000178 exosome (RNase complex)

Protein Annotation

Displaying annotations FIRST to LAST of TOTAL Page size: Additional filters: Bookmarkable link
Database
Gene Product ID
Symbol
Qualifier
GO Identifier
GO Term Name
Aspect
Original GO ID
Original GO Term Name
Evidence
Reference
With
Taxon
Date
Assigned By
Product Form ID
Name
Synonym
Type
Taxon Name
Sequence

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ID Mapping

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Co-occurring Terms

These tables show the number of times the term listed in the table has been co-annotated with GO:0003723. The terms are listed in descending order of number of times the term has been co-annotated.
The table on the left is calculated using both electronic and manual-evidenced annotations, while the table on the right is calculated using only manual-evidenced annotations.
Co-occurrence statistics for GO:0003723 based on the entire annotation set Co-occurrence statistics for GO:0003723 based on non-IEA annotations only

Change Log

All changes

Timestamp Action Category Detail
2017-03-04 Added SLIM goslim_agr
2017-01-26 Added SYNONYM poly(A) RNA binding
2017-01-26 Added SYNONYM poly(A)-RNA binding
2017-01-26 Added SYNONYM poly-A RNA binding
2017-01-26 Added SECONDARY GO:0044822 (poly(A) RNA binding)
2016-12-17 Added SLIM goslim_mouse
2015-05-19 Added SLIM goslim_chembl
2015-05-19 Deleted SLIM goslim_ChEMBL
2015-05-11 Added SLIM goslim_ChEMBL
2013-04-18 Updated SLIM goslim_aspergillus
2013-04-18 Updated SLIM goslim_generic
2013-04-18 Updated SLIM goslim_yeast
2013-04-18 Updated SLIM goslim_plant
2013-04-18 Updated SLIM goslim_candida
2012-03-29 Deleted SLIM goslim_metagenomics
2012-02-17 Added SLIM goslim_metagenomics
2012-02-10 Added SLIM goslim_generic
2011-11-05 Added SLIM goslim_aspergillus
2010-12-05 Deleted SLIM goslim_generic
2009-07-03 Added DEFINITION Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
2009-07-03 Deleted DEFINITION Interacting selectively with an RNA molecule or a portion thereof.
2008-06-09 Added SLIM goslim_yeast
2008-06-09 Added SLIM goslim_plant
2008-06-09 Added SLIM goslim_generic
2008-06-09 Added SLIM goslim_candida
2008-05-13 Added DEFINITION Interacting selectively with an RNA molecule or a portion thereof.
2008-05-12 Deleted DEFINITION Interacting selectively with an RNA molecule or a portion thereof.
2008-04-01 Updated RELATION is a GO:0003676 (nucleic acid binding)
2003-06-10 Updated TERM RNA binding
2003-03-19 Updated TERM RNA binding activity
2002-11-27 Added DEFINITION Interacting selectively with an RNA molecule or a portion thereof.
2002-02-06 Updated TERM RNA binding
2001-04-03 Updated TERM RNA binding
2001-03-30 Added TERM RNA binding

Term

Timestamp Action Category Detail
2003-06-10 Updated TERM RNA binding
2003-03-19 Updated TERM RNA binding activity
2002-02-06 Updated TERM RNA binding
2001-04-03 Updated TERM RNA binding
2001-03-30 Added TERM RNA binding

Definition/synonyms

Timestamp Action Category Detail
2017-01-26 Added SYNONYM poly(A) RNA binding
2017-01-26 Added SYNONYM poly(A)-RNA binding
2017-01-26 Added SYNONYM poly-A RNA binding
2009-07-03 Added DEFINITION Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
2009-07-03 Deleted DEFINITION Interacting selectively with an RNA molecule or a portion thereof.
2008-05-13 Added DEFINITION Interacting selectively with an RNA molecule or a portion thereof.
2008-05-12 Deleted DEFINITION Interacting selectively with an RNA molecule or a portion thereof.
2002-11-27 Added DEFINITION Interacting selectively with an RNA molecule or a portion thereof.

Relationships

Timestamp Action Category Detail
2008-04-01 Updated RELATION is a GO:0003676 (nucleic acid binding)

Other

Timestamp Action Category Detail
2017-03-04 Added SLIM goslim_agr
2017-01-26 Added SECONDARY GO:0044822 (poly(A) RNA binding)
2016-12-17 Added SLIM goslim_mouse
2015-05-19 Added SLIM goslim_chembl
2015-05-19 Deleted SLIM goslim_ChEMBL
2015-05-11 Added SLIM goslim_ChEMBL
2013-04-18 Updated SLIM goslim_aspergillus
2013-04-18 Updated SLIM goslim_generic
2013-04-18 Updated SLIM goslim_yeast
2013-04-18 Updated SLIM goslim_plant
2013-04-18 Updated SLIM goslim_candida
2012-03-29 Deleted SLIM goslim_metagenomics
2012-02-17 Added SLIM goslim_metagenomics
2012-02-10 Added SLIM goslim_generic
2011-11-05 Added SLIM goslim_aspergillus
2010-12-05 Deleted SLIM goslim_generic
2008-06-09 Added SLIM goslim_yeast
2008-06-09 Added SLIM goslim_plant
2008-06-09 Added SLIM goslim_generic
2008-06-09 Added SLIM goslim_candida
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