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GO:0003677 DNA binding

Any molecular function by which a gene product interacts selectively with DNA (deoxyribonucleic acid).

Term Information

ID GO:0003677
Name DNA binding
Ontology Molecular Function
Definition Any molecular function by which a gene product interacts selectively with DNA (deoxyribonucleic acid).
Comment

GO Slims

This term is present in the following GO Consortium-maintained GO slims:
GO slim nameCount of all terms
goslim_candida91
goslim_generic127
goslim_plant102
goslim_yeast93

Synonyms

Type Synonym
narrow plasmid binding
related microtubule/chromatin interaction

Cross-references associated with this term:

Database ID
INTERPRO IPR013506
INTERPRO IPR006642
INTERPRO IPR006695
INTERPRO IPR007925
INTERPRO IPR010992
INTERPRO IPR007933
INTERPRO IPR007944
INTERPRO IPR006359
INTERPRO IPR008013
INTERPRO IPR008393
INTERPRO IPR008415
INTERPRO IPR001177
INTERPRO IPR001208
INTERPRO IPR001241
INTERPRO IPR001275
INTERPRO IPR001292
INTERPRO IPR003163
INTERPRO IPR003173
INTERPRO IPR003174
INTERPRO IPR003176
INTERPRO IPR003180
INTERPRO IPR003202
INTERPRO IPR003212
INTERPRO IPR003222
INTERPRO IPR011350
INTERPRO IPR010524
INTERPRO IPR010525
INTERPRO IPR010534
INTERPRO IPR010542
INTERPRO IPR010744
INTERPRO IPR010748
INTERPRO IPR003441
INTERPRO IPR013757
INTERPRO IPR013758
INTERPRO IPR013759
INTERPRO IPR013760
INTERPRO IPR013762
INTERPRO IPR011010
INTERPRO IPR012754
INTERPRO IPR012755
INTERPRO IPR012756
INTERPRO IPR012757
INTERPRO IPR012758
INTERPRO IPR012759
INTERPRO IPR012760
INTERPRO IPR012761
INTERPRO IPR008336
INTERPRO IPR006358
INTERPRO IPR019483
INTERPRO IPR019044
INTERPRO IPR019809
INTERPRO IPR000040
INTERPRO IPR000055
INTERPRO IPR000079
INTERPRO IPR000116
INTERPRO IPR000119
INTERPRO IPR000128
INTERPRO IPR000135
INTERPRO IPR000164
INTERPRO IPR002008
INTERPRO IPR002054
INTERPRO IPR002059
INTERPRO IPR009084
INTERPRO IPR012287
INTERPRO IPR017995
INTERPRO IPR012293
INTERPRO IPR012294
INTERPRO IPR011794
INTERPRO IPR011797
INTERPRO IPR000003
INTERPRO IPR005412
INTERPRO IPR005471
INTERPRO IPR005539
INTERPRO IPR005540
INTERPRO IPR005541
INTERPRO IPR008422
INTERPRO IPR008721
INTERPRO IPR011260
INTERPRO IPR010614
INTERPRO IPR010712
INTERPRO IPR011773
INTERPRO IPR011931
INTERPRO IPR011932
INTERPRO IPR001553
INTERPRO IPR011940
INTERPRO IPR011946
INTERPRO IPR004107
INTERPRO IPR009021
INTERPRO IPR000427
INTERPRO IPR015199
INTERPRO IPR010372
INTERPRO IPR005790
INTERPRO IPR008921
INTERPRO IPR011335
INTERPRO IPR017910
INTERPRO IPR010932
INTERPRO IPR011557
INTERPRO IPR013049
INTERPRO IPR013263
INTERPRO IPR013497
INTERPRO IPR013498
INTERPRO IPR013499
INTERPRO IPR013500
INTERPRO IPR012845
INTERPRO IPR018521
INTERPRO IPR018522
INTERPRO IPR018384
INTERPRO IPR005259
INTERPRO IPR009767
INTERPRO IPR011789
INTERPRO IPR012052
INTERPRO IPR006120
INTERPRO IPR013825
INTERPRO IPR013826
INTERPRO IPR014711
INTERPRO IPR014727
INTERPRO IPR015320
INTERPRO IPR015346
INTERPRO IPR004084
INTERPRO IPR004085
INTERPRO IPR004122
INTERPRO IPR006134
INTERPRO IPR006164
INTERPRO IPR006165
INTERPRO IPR000201
INTERPRO IPR000212
INTERPRO IPR003477
INTERPRO IPR003491
INTERPRO IPR002092
INTERPRO IPR002104
INTERPRO IPR002119
INTERPRO IPR010886
INTERPRO IPR001025
INTERPRO IPR001091
INTERPRO IPR001098
INTERPRO IPR001103
INTERPRO IPR001154
INTERPRO IPR001161
INTERPRO IPR001162
INTERPRO IPR003314
INTERPRO IPR003340
INTERPRO IPR003346
INTERPRO IPR003350
INTERPRO IPR003356
INTERPRO IPR003391
INTERPRO IPR003415
INTERPRO IPR003432
INTERPRO IPR009044
INTERPRO IPR018117
INTERPRO IPR018131
INTERPRO IPR018140
INTERPRO IPR004230
INTERPRO IPR018151
INTERPRO IPR018330
INTERPRO IPR015115
INTERPRO IPR007121
INTERPRO IPR007125
INTERPRO IPR007692
INTERPRO IPR000324
INTERPRO IPR002186
INTERPRO IPR002205
INTERPRO IPR004343
INTERPRO IPR004189
INTERPRO IPR004191
INTERPRO IPR004210
INTERPRO IPR001319
INTERPRO IPR001334
INTERPRO IPR001409
INTERPRO IPR003523
INTERPRO IPR003545
INTERPRO IPR003601
INTERPRO IPR003602
INTERPRO IPR003650
INTERPRO IPR003654
INTERPRO IPR003656
INTERPRO IPR012532
INTERPRO IPR018525
INTERPRO IPR019063
INTERPRO IPR019073
INTERPRO IPR019071
INTERPRO IPR003583
INTERPRO IPR019045
INTERPRO IPR019046
INTERPRO IPR019070
INTERPRO IPR019057
INTERPRO IPR013572
INTERPRO IPR013524
INTERPRO IPR015351
INTERPRO IPR002836
INTERPRO IPR005160
INTERPRO IPR020062
INTERPRO IPR013030
INTERPRO IPR013795
INTERPRO IPR000221
INTERPRO IPR002145
INTERPRO IPR005684
INTERPRO IPR005685
INTERPRO IPR005733
INTERPRO IPR005734
INTERPRO IPR005736
INTERPRO IPR005737
INTERPRO IPR005738
INTERPRO IPR005739
INTERPRO IPR005740
INTERPRO IPR005741
INTERPRO IPR005742
INTERPRO IPR005743
INTERPRO IPR012712
INTERPRO IPR013824
INTERPRO IPR008049
INTERPRO IPR008050
INTERPRO IPR008087
INTERPRO IPR014893
INTERPRO IPR018362
INTERPRO IPR018373
INTERPRO IPR012582
INTERPRO IPR000445
INTERPRO IPR002288
INTERPRO IPR002294
INTERPRO IPR002295
INTERPRO IPR002297
INTERPRO IPR002298
INTERPRO IPR013324
INTERPRO IPR004437
INTERPRO IPR004475
INTERPRO IPR004483
INTERPRO IPR001510
INTERPRO IPR001514
INTERPRO IPR000330
INTERPRO IPR000380
INTERPRO IPR000394
INTERPRO IPR005818
INTERPRO IPR005819
INTERPRO IPR008888
INTERPRO IPR008876
INTERPRO IPR008865
INTERPRO IPR007624
INTERPRO IPR007627
INTERPRO IPR007630
INTERPRO IPR007631
INTERPRO IPR009042
INTERPRO IPR007668
INTERPRO IPR001598
INTERPRO IPR002513
INTERPRO IPR007069
INTERPRO IPR002686
INTERPRO IPR005063
INTERPRO IPR002514
INTERPRO IPR001437
INTERPRO IPR004221
INTERPRO IPR011336
INTERPRO IPR011337
INTERPRO IPR015307
INTERPRO IPR013503
INTERPRO IPR010113
INTERPRO IPR018144
INTERPRO IPR013628
INTERPRO IPR004321
INTERPRO IPR004333
INTERPRO IPR006774
INTERPRO IPR006779
INTERPRO IPR006854
INTERPRO IPR007120
INTERPRO IPR004590
INTERPRO IPR004591
INTERPRO IPR002543
INTERPRO IPR008593
INTERPRO IPR012771
INTERPRO IPR012884
INTERPRO IPR012890
INTERPRO IPR003308
INTERPRO IPR010211
INTERPRO IPR010248
INTERPRO IPR010270
INTERPRO IPR010312
INTERPRO IPR010336
INTERPRO IPR010575
INTERPRO IPR010578
INTERPRO IPR011564
INTERPRO IPR019072
INTERPRO IPR019067
INTERPRO IPR008920
INTERPRO IPR014178
INTERPRO IPR012900
INTERPRO IPR012925
INTERPRO IPR012957
INTERPRO IPR012958
INTERPRO IPR015887
INTERPRO IPR018287
INTERPRO IPR001083
INTERPRO IPR008193
INTERPRO IPR000603
INTERPRO IPR000678
INTERPRO IPR000684
INTERPRO IPR001525
INTERPRO IPR001529
INTERPRO IPR010996
INTERPRO IPR012178
INTERPRO IPR012601
INTERPRO IPR006291
INTERPRO IPR007738
INTERPRO IPR007811
INTERPRO IPR018516
INTERPRO IPR018518
INTERPRO IPR010982
INTERPRO IPR008045
INTERPRO IPR008046
INTERPRO IPR008047
INTERPRO IPR008048
INTERPRO IPR002525
INTERPRO IPR002546
INTERPRO IPR011325
INTERPRO IPR011338
INTERPRO IPR014808
INTERPRO IPR011544
INTERPRO IPR011578
INTERPRO IPR011604
INTERPRO IPR015277
INTERPRO IPR015334
INTERPRO IPR006166
INTERPRO IPR007560
INTERPRO IPR015109
INTERPRO IPR009528
INTERPRO IPR007637
INTERPRO IPR011639
INTERPRO IPR004233
INTERPRO IPR004234
INTERPRO IPR015291
INTERPRO IPR007636
INTERPRO IPR007409
INTERPRO IPR004473
INTERPRO IPR004546
INTERPRO IPR008288
INTERPRO IPR001723
INTERPRO IPR001728
INTERPRO IPR001739
INTERPRO IPR017967
INTERPRO IPR001801
INTERPRO IPR003851
INTERPRO IPR003888
INTERPRO IPR003889
INTERPRO IPR003893
INTERPRO IPR003902
INTERPRO IPR006197
INTERPRO IPR013700
INTERPRO IPR018312
INTERPRO IPR019068
INTERPRO IPR005621
INTERPRO IPR015833
INTERPRO IPR014296
INTERPRO IPR014293
INTERPRO IPR014286
INTERPRO IPR014284
INTERPRO IPR014236
INTERPRO IPR014212
INTERPRO IPR014322
INTERPRO IPR014218
INTERPRO IPR014209
INTERPRO IPR014200
INTERPRO IPR013249
INTERPRO IPR008246
INTERPRO IPR008247
INTERPRO IPR016371
INTERPRO IPR016263
INTERPRO IPR000722
INTERPRO IPR000730
INTERPRO IPR002421
INTERPRO IPR002492
INTERPRO IPR004578
INTERPRO IPR011210
INTERPRO IPR008807
INTERPRO IPR001606
INTERPRO IPR001616
INTERPRO IPR001631
INTERPRO IPR001668
INTERPRO IPR001719
INTERPRO IPR003957
INTERPRO IPR004026
INTERPRO IPR009868
INTERPRO IPR009668
INTERPRO IPR010990
INTERPRO IPR014765
INTERPRO IPR014754
INTERPRO IPR008918
INTERPRO IPR009072
INTERPRO IPR016032
INTERPRO IPR019969
INTERPRO IPR020045
INTERPRO IPR020047
INTERPRO IPR020046
INTERPRO IPR006119
INTERPRO IPR005227
INTERPRO IPR002559
INTERPRO IPR011420
INTERPRO IPR011879
INTERPRO IPR012090
INTERPRO IPR001584
INTERPRO IPR002560
INTERPRO IPR002631
INTERPRO IPR002643
INTERPRO IPR002653
INTERPRO IPR002694
INTERPRO IPR004645
INTERPRO IPR006935
INTERPRO IPR015094
INTERPRO IPR009054
INTERPRO IPR014396
INTERPRO IPR009089
INTERPRO IPR010585
INTERPRO IPR014751
INTERPRO IPR008917
INTERPRO IPR017956
INTERPRO IPR018246
INTERPRO IPR012308
INTERPRO IPR015660
INTERPRO IPR006794
INTERPRO IPR000492
INTERPRO IPR000558
INTERPRO IPR000565
INTERPRO IPR001866
INTERPRO IPR001867
INTERPRO IPR002941
INTERPRO IPR017985
INTERPRO IPR004826
INTERPRO IPR004868
INTERPRO IPR001523
INTERPRO IPR016811
INTERPRO IPR005319
INTERPRO IPR011526
INTERPRO IPR011364
INTERPRO IPR011373
INTERPRO IPR005569
INTERPRO IPR011399
INTERPRO IPR008684
INTERPRO IPR016177
INTERPRO IPR001207
INTERPRO IPR017253
INTERPRO IPR013325
INTERPRO IPR005571
INTERPRO IPR008823
INTERPRO IPR004605
INTERPRO IPR008851
INTERPRO IPR008895
INTERPRO IPR009970
INTERPRO IPR012239
INTERPRO IPR012243
INTERPRO IPR012246
INTERPRO IPR012542
INTERPRO IPR000747
INTERPRO IPR000770
INTERPRO IPR000783
INTERPRO IPR000814
INTERPRO IPR000837
INTERPRO IPR000838
INTERPRO IPR002815
INTERPRO IPR002857
INTERPRO IPR007406
INTERPRO IPR007832
INTERPRO IPR007868
INTERPRO IPR007869
INTERPRO IPR007889
INTERPRO IPR007911
INTERPRO IPR008329
INTERPRO IPR006815
INTERPRO IPR011177
INTERPRO IPR007083
INTERPRO IPR007759
INTERPRO IPR007984
INTERPRO IPR007937
INTERPRO IPR008448
INTERPRO IPR008806
INTERPRO IPR007641
INTERPRO IPR007642
INTERPRO IPR007644
INTERPRO IPR007645
INTERPRO IPR007646
INTERPRO IPR007647
INTERPRO IPR007185
INTERPRO IPR007199
INTERPRO IPR007219
INTERPRO IPR007591
INTERPRO IPR000148
INTERPRO IPR010114
INTERPRO IPR011615
INTERPRO IPR002117
INTERPRO IPR001630
INTERPRO IPR003074
INTERPRO IPR003075
INTERPRO IPR003076
INTERPRO IPR001001
INTERPRO IPR001005
INTERPRO IPR003022
INTERPRO IPR003025
INTERPRO IPR003068
INTERPRO IPR003069
INTERPRO IPR003070
INTERPRO IPR003071
INTERPRO IPR003072
INTERPRO IPR003073
INTERPRO IPR009400
INTERPRO IPR009162
INTERPRO IPR009170
INTERPRO IPR001943
INTERPRO IPR001945
INTERPRO IPR001951
INTERPRO IPR001957
INTERPRO IPR001982
INTERPRO IPR013430
INTERPRO IPR012781
INTERPRO IPR000910
INTERPRO IPR000943
INTERPRO IPR000969
INTERPRO IPR000989
INTERPRO IPR006110
INTERPRO IPR006111
INTERPRO IPR012318
INTERPRO IPR012704
INTERPRO IPR000097
INTERPRO IPR013670
INTERPRO IPR009055
INTERPRO IPR011663
INTERPRO IPR012346
INTERPRO IPR002910
INTERPRO IPR005650
INTERPRO IPR012787
INTERPRO IPR012794
INTERPRO IPR006691
INTERPRO IPR006288
INTERPRO IPR006417
INTERPRO IPR006429
INTERPRO IPR006856
INTERPRO IPR003077
INTERPRO IPR003078
INTERPRO IPR003079
INTERPRO IPR003106
INTERPRO IPR003115
INTERPRO IPR003141
INTERPRO IPR003150
INTERPRO IPR004986
INTERPRO IPR004999
INTERPRO IPR005039
INTERPRO IPR005376
INTERPRO IPR006054
INTERPRO IPR006308
INTERPRO IPR006309
INTERPRO IPR007459
INTERPRO IPR009052
INTERPRO IPR018999
INTERPRO IPR010078
INTERPRO IPR010093
INTERPRO IPR007025
INTERPRO IPR010243
INTERPRO IPR007015
INTERPRO IPR007046
INTERPRO IPR007071
INTERPRO IPR001827
INTERPRO IPR007127
INTERPRO IPR004973
INTERPRO IPR009025
INTERPRO IPR004519
INTERPRO IPR005059
INTERPRO IPR006591
INTERPRO IPR006592
INTERPRO IPR007066
INTERPRO IPR007073
INTERPRO IPR007075
INTERPRO IPR007080
INTERPRO IPR007081

This term can be used instead of these obsolete terms:

GO:0008546 microtubule/chromatin interaction (consider GO:0003677)
GO:0003694 plasmid binding (consider GO:0003677)

Web service: term information

Use this URI template to access this data as a service:

GTerm?id=termID&format=format

Full details can be found on the QuickGO Web Services page.

Ancestor Chart

Visual display of a section of the GO directed acyclic graph (DAG) for a single GO term. Terms in the GO are linked to parent (more general) terms and often to child (more specific) terms by one or more 'relationships'

All GO terms displayed in this graph can be clicked to display term definitions and child (descendent) terms.

Chart

Ancestor Table

Alternative display of a section of the GO, providing a concise view of the relationships connecting GO terms

All GO terms displayed in this chart can be right-clicked to display term definitions and child (descendent) terms.

GO:0003674 molecular_function
GO:0005488 binding
GO:0003676 nucleic acid binding
GO:0003677 DNA binding

Relationship key

Code Relationship
part of
is a
regulates
+ve regulates
-ve regulates

Child Terms

All direct descendants (child terms) available for this GO term:
I GO:0003684 damaged DNA binding
I GO:0003700 transcription factor activity
I GO:0008301 DNA bending activity
I GO:0003916 DNA topoisomerase activity
I GO:0043565 sequence-specific DNA binding
I GO:0043566 structure-specific DNA binding
I GO:0003689 DNA clamp loader activity
I GO:0015616 DNA translocase activity
I GO:0044212 DNA regulatory region binding
I GO:0010844 recombination hotspot binding
I GO:0000497 base pairing with DNA

Relationship key

CodeRelationship
Ppart of
Iis a

Protein Annotation

DB
ID
Qualifier colocalizes_with contributes_to NOT NOT|colocalizes_with NOT|contributes_to
GO Term
Reference
Evidence IMP IGI IPI IGC ISS IDA IEP IEA TAS NAS ND IC RCA ISA EXP
With
Taxonomy
From
Download limit
Format

Co-occurring Terms

Co-occurrence statistics

This display shows those GO terms which have been annotated to the same proteins as this term.
Terms may have been co-annotated either by electronic (IEA) or manual annotation methods. Users can decide which evidence code type should be used in the calculation of the co-occurence statistics.
Click on the 'Update' button to run the co-occurence calculation
IMP IGI IPI IGC ISS IDA IEP IEA TAS NAS ND IC RCA ISA EXP Statistics may take up to 1 minute to calculate
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