spacer

GO:0001522 pseudouridine synthesis

Term Information

ID GO:0001522
Name pseudouridine synthesis
Ontology Biological Process
Definition The intramolecular conversion of uridine to pseudouridine within an RNA molecule. This posttranscriptional base modification occurs in tRNA, rRNA, and snRNAs.
GONUTS GO:0001522 Wiki Page

Synonyms

Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope. Click on the icon for more details.
Type Synonym
exact pseudouridylation

Cross-references

Database ID
InterPro IPR000748
InterPro IPR001406
InterPro IPR001656
InterPro IPR005912
InterPro IPR006145
InterPro IPR006224
InterPro IPR006225
InterPro IPR007264
InterPro IPR007504
InterPro IPR011760
InterPro IPR014780
InterPro IPR015225
InterPro IPR015240
InterPro IPR017091
InterPro IPR018496
InterPro IPR020094
InterPro IPR020095
InterPro IPR020097
InterPro IPR020103
InterPro IPR020119
InterPro IPR020321
InterPro IPR021154
InterPro IPR023532
Wikipedia Pseudouridine
Wikipedia Pseudouridylation

Ancestor Chart

This chart is interactive; you can click on the term boxes and legend for more information.
Display options
Display
Key
GO IDs
Term box width
Term box height
Slim colours
Show children
Image size limit (in megapixels)
Note that setting the limit too high may result in images being generated slowly; it may even cause the browser to crash. The maximum limit is 20 megapixels.

Child Terms

This table lists all terms that are direct descendants (child terms) of GO:0001522:
Relationship To GO:0001522 Child Term Child Term Name
Is a GO:0031118 rRNA pseudouridine synthesis
Is a GO:0031119 tRNA pseudouridine synthesis
Is a GO:0031120 snRNA pseudouridine synthesis
Is a GO:1990481 mRNA pseudouridine synthesis
Part of GO:0004730 pseudouridylate synthase activity

Protein Annotation

Displaying annotations FIRST to LAST of TOTAL Page size: Additional filters: Bookmarkable link
Database
Gene Product ID
Symbol
Qualifier
GO Identifier
GO Term Name
Aspect
Original GO ID
Original GO Term Name
Evidence
Reference
With
Taxon
Date
Assigned By
Product Form ID
Name
Synonym
Type
Taxon Name
Sequence

Export

Display options

ID Mapping

QuickGO maps between different identifier types by using a combination of mapping files provided by the databases, and using identifier cross-references supplied by UniProtKB.

If more than one identifier type needs to be used to map all required sequences, drag the selected databases to change the order in which identifiers are found.

Filter

Select

Grouped by
Annotation count
Protein count
Both

Co-occurring Terms

These tables show the number of times the term listed in the table has been co-annotated with GO:0001522. The terms are listed in descending order of number of times the term has been co-annotated.
The table on the left is calculated using both electronic and manual-evidenced annotations, while the table on the right is calculated using only manual-evidenced annotations.
Co-occurrence statistics for GO:0001522 based on the entire annotation set Co-occurrence statistics for GO:0001522 based on non-IEA annotations only

Change Log

All changes

Timestamp Action Category Detail
2009-02-25 Added XREF Wikipedia:Pseudouridylation
2009-02-25 Added XREF Wikipedia:Pseudouridine
2008-05-13 Added DEFINITION The intramolecular conversion of uridine to pseudouridine within an RNA molecule. This posttranscriptional base modification occurs in tRNA, rRNA, and snRNAs.
2008-05-12 Deleted DEFINITION The intramolecular conversion of uridine to pseudouridine within an RNA molecule. This posttranscriptional base modification occurs in tRNA, rRNA, and snRNAs.
2008-04-01 Updated RELATION is a GO:0009451 (RNA modification)
2007-08-09 Added SYNONYM pseudouridylation
2007-08-09 Deleted SYNONYM pseudouridylation
2005-01-20 Updated DEFINITION The intramolecular conversion of uridine to pseudouridine within an RNA molecule. This posttranscriptional base modification occurs in tRNA, rRNA, and snRNAs.
2005-01-19 Updated DEFINITION Rotation of the C1'-N-1 glycosidic bond of uridine in RNA to a C1'-C5. This posttranscriptional base modification occurs in tRNA, rRNA, and snRNAs.
2005-01-17 Updated DEFINITION The intramolecular conversion of uridine to pseudouridine within an RNA molecule. This posttranscriptional base modification occurs in tRNA, rRNA, and snRNAs.
2005-01-16 Updated DEFINITION Rotation of the C1'-N-1 glycosidic bond of uridine in RNA to a C1'-C5. This posttranscriptional base modification occurs in tRNA, rRNA, and snRNAs.
2005-01-15 Updated DEFINITION The intramolecular conversion of uridine to pseudouridine within an RNA molecule. This posttranscriptional base modification occurs in tRNA, rRNA, and snRNAs.
2005-01-14 Updated DEFINITION Rotation of the C1'-N-1 glycosidic bond of uridine in RNA to a C1'-C5. This posttranscriptional base modification occurs in tRNA, rRNA, and snRNAs.
2005-01-13 Updated DEFINITION The intramolecular conversion of uridine to pseudouridine within an RNA molecule. This posttranscriptional base modification occurs in tRNA, rRNA, and snRNAs.
2005-01-12 Updated DEFINITION Rotation of the C1'-N-1 glycosidic bond of uridine in RNA to a C1'-C5. This posttranscriptional base modification occurs in tRNA, rRNA, and snRNAs.
2005-01-11 Updated DEFINITION The intramolecular conversion of uridine to pseudouridine within an RNA molecule. This posttranscriptional base modification occurs in tRNA, rRNA, and snRNAs.
2003-04-29 Updated DEFINITION Rotation of the C1'-N-1 glycosidic bond of uridine in RNA to a C1'-C5. This posttranscriptional base modification occurs in tRNA, rRNA, and snRNAs.
2002-02-06 Updated TERM pseudouridine synthesis
2001-08-06 Added DEFINITION Rotation of the C1'-N-1 glycosidic bond of uridine in RNA to a C1'-C5. This post-transcriptional base modification occurs in tRNA, rRNA, and snRNAs.
2001-04-03 Updated TERM pseudouridine synthesis
2001-03-30 Added SYNONYM pseudouridylation
2001-03-30 Added TERM pseudouridine synthesis

Term

Timestamp Action Category Detail
2002-02-06 Updated TERM pseudouridine synthesis
2001-04-03 Updated TERM pseudouridine synthesis
2001-03-30 Added TERM pseudouridine synthesis

Definition/synonyms

Timestamp Action Category Detail
2008-05-13 Added DEFINITION The intramolecular conversion of uridine to pseudouridine within an RNA molecule. This posttranscriptional base modification occurs in tRNA, rRNA, and snRNAs.
2008-05-12 Deleted DEFINITION The intramolecular conversion of uridine to pseudouridine within an RNA molecule. This posttranscriptional base modification occurs in tRNA, rRNA, and snRNAs.
2007-08-09 Added SYNONYM pseudouridylation
2007-08-09 Deleted SYNONYM pseudouridylation
2005-01-20 Updated DEFINITION The intramolecular conversion of uridine to pseudouridine within an RNA molecule. This posttranscriptional base modification occurs in tRNA, rRNA, and snRNAs.
2005-01-19 Updated DEFINITION Rotation of the C1'-N-1 glycosidic bond of uridine in RNA to a C1'-C5. This posttranscriptional base modification occurs in tRNA, rRNA, and snRNAs.
2005-01-17 Updated DEFINITION The intramolecular conversion of uridine to pseudouridine within an RNA molecule. This posttranscriptional base modification occurs in tRNA, rRNA, and snRNAs.
2005-01-16 Updated DEFINITION Rotation of the C1'-N-1 glycosidic bond of uridine in RNA to a C1'-C5. This posttranscriptional base modification occurs in tRNA, rRNA, and snRNAs.
2005-01-15 Updated DEFINITION The intramolecular conversion of uridine to pseudouridine within an RNA molecule. This posttranscriptional base modification occurs in tRNA, rRNA, and snRNAs.
2005-01-14 Updated DEFINITION Rotation of the C1'-N-1 glycosidic bond of uridine in RNA to a C1'-C5. This posttranscriptional base modification occurs in tRNA, rRNA, and snRNAs.
2005-01-13 Updated DEFINITION The intramolecular conversion of uridine to pseudouridine within an RNA molecule. This posttranscriptional base modification occurs in tRNA, rRNA, and snRNAs.
2005-01-12 Updated DEFINITION Rotation of the C1'-N-1 glycosidic bond of uridine in RNA to a C1'-C5. This posttranscriptional base modification occurs in tRNA, rRNA, and snRNAs.
2005-01-11 Updated DEFINITION The intramolecular conversion of uridine to pseudouridine within an RNA molecule. This posttranscriptional base modification occurs in tRNA, rRNA, and snRNAs.
2003-04-29 Updated DEFINITION Rotation of the C1'-N-1 glycosidic bond of uridine in RNA to a C1'-C5. This posttranscriptional base modification occurs in tRNA, rRNA, and snRNAs.
2001-08-06 Added DEFINITION Rotation of the C1'-N-1 glycosidic bond of uridine in RNA to a C1'-C5. This post-transcriptional base modification occurs in tRNA, rRNA, and snRNAs.
2001-03-30 Added SYNONYM pseudouridylation

Relationships

Timestamp Action Category Detail
2008-04-01 Updated RELATION is a GO:0009451 (RNA modification)

Cross-references

Timestamp Action Category Detail
2009-02-25 Added XREF Wikipedia:Pseudouridylation
2009-02-25 Added XREF Wikipedia:Pseudouridine
spacer
Please send comments, suggestions or bug reports to goa@ebi.ac.uk. Click here for details of how to cite UniProt-GOA and QuickGO.
11ms