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GO:0000981 sequence-specific DNA binding RNA polymerase II transcription factor activity

Term Information

ID GO:0000981
Name sequence-specific DNA binding RNA polymerase II transcription factor activity
Ontology Molecular Function
Definition Interacting selectively and non-covalently with a specific DNA sequence in order to modulate transcription by RNA polymerase II. The transcription factor may or may not also interact selectively with a protein or macromolecular complex.
GONUTS GO:0000981 Wiki Page

Annotation Guidance

Usage of this term is subject to the following annotation guidelines:
Annotation Guidelines
Annotating to transcription factor activitiesLink

Cross-references

Database ID
InterPro IPR001138
InterPro IPR020448
InterPro IPR027742
InterPro IPR027755
InterPro IPR027756
InterPro IPR027757
InterPro IPR027758
InterPro IPR029548

Replaces

This term can be used instead of these obsolete terms:
GO Identifier GO Term Name Reason
GO:0003702 RNA polymerase II transcription factor activity CONSIDER GO:0000981
GO:0003704 specific RNA polymerase II transcription factor activity CONSIDER GO:0000981
GO:0016251 general RNA polymerase II transcription factor activity CONSIDER GO:0000981
GO:0016252 nonspecific RNA polymerase II transcription factor activity CONSIDER GO:0000981

Ancestor Chart

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Child Terms

This table lists all terms that are direct descendants (child terms) of GO:0000981:
Relationship To GO:0000981 Child Term Child Term Name
Has part GO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding
Is a GO:0003705 RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity
Is a GO:0000982 RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity
Is a GO:0000983 RNA polymerase II core promoter sequence-specific DNA binding transcription factor activity
Is a GO:0001200 metal ion regulated sequence-specific DNA binding RNA polymerase II transcription factor activity
Is a GO:0001227 RNA polymerase II transcription regulatory region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription
Is a GO:0001228 RNA polymerase II transcription regulatory region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
Is a GO:0004879 ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity

Protein Annotation

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GO Identifier
GO Term Name
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Original GO ID
Original GO Term Name
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Co-occurring Terms

These tables show the number of times the term listed in the table has been co-annotated with GO:0000981. The terms are listed in descending order of number of times the term has been co-annotated.
The table on the left is calculated using both electronic and manual-evidenced annotations, while the table on the right is calculated using only manual-evidenced annotations.
Co-occurrence statistics for GO:0000981 based on the entire annotation set Co-occurrence statistics for GO:0000981 based on non-IEA annotations only

Change Log

All changes

Timestamp Action Category Detail
2015-05-19 Deleted RELATION part of GO:0006366 (transcription from RNA polymerase II promoter)
2011-10-13 Added RELATION part of GO:0006357 (regulation of transcription from RNA polymerase II promoter)
2010-10-31 Added RELATION part of GO:0006366 (transcription from RNA polymerase II promoter)
2010-09-03 Added RELATION is a GO:0003700 (sequence-specific DNA binding transcription factor activity)
2010-09-03 Added DEFINITION Interacting selectively and non-covalently with a specific DNA sequence in order to modulate transcription by RNA polymerase II. The transcription factor may or may not also interact selectively with a protein or macromolecular complex.
2010-09-03 Added TERM sequence-specific DNA binding RNA polymerase II transcription factor activity

Term

Timestamp Action Category Detail
2010-09-03 Added TERM sequence-specific DNA binding RNA polymerase II transcription factor activity

Definition/synonyms

Timestamp Action Category Detail
2010-09-03 Added DEFINITION Interacting selectively and non-covalently with a specific DNA sequence in order to modulate transcription by RNA polymerase II. The transcription factor may or may not also interact selectively with a protein or macromolecular complex.

Relationships

Timestamp Action Category Detail
2015-05-19 Deleted RELATION part of GO:0006366 (transcription from RNA polymerase II promoter)
2011-10-13 Added RELATION part of GO:0006357 (regulation of transcription from RNA polymerase II promoter)
2010-10-31 Added RELATION part of GO:0006366 (transcription from RNA polymerase II promoter)
2010-09-03 Added RELATION is a GO:0003700 (sequence-specific DNA binding transcription factor activity)
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