spacer

GO:0000339 RNA cap binding

Term Information

ID GO:0000339
Name RNA cap binding
Ontology Molecular Function
Definition Interacting selectively and non-covalently with a 7-methylguanosine (m7G) group or derivative located at the 5' end of an RNA molecule.
GONUTS GO:0000339 Wiki Page

Synonyms

Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope. Click on the icon for more details.
Type Synonym
narrow binding to mRNA cap
narrow mRNA cap binding
narrow snRNA cap binding

Annotation Guidance

Usage of this term is subject to the following annotation guidelines:
Annotation Guidelines
Binding term considerationsLink

Cross-references

Database ID
InterPro IPR027157
InterPro IPR027159

Replaces

This term can be used instead of these obsolete terms:
GO Identifier GO Term Name Reason
GO:0003731 mRNA cap binding CONSIDER GO:0000339
GO:0003732 snRNA cap binding CONSIDER GO:0000339
GO:0006441 binding to mRNA cap CONSIDER GO:0000339

Ancestor Chart

This chart is interactive; you can click on the term boxes and legend for more information.
Display options
Display
Key
GO IDs
Term box width
Term box height
Slim colours
Show children
Image size limit (in megapixels)
Note that setting the limit too high may result in images being generated slowly; it may even cause the browser to crash. The maximum limit is 20 megapixels.

Child Terms

This table lists all terms that are direct descendants (child terms) of GO:0000339:
Relationship To GO:0000339 Child Term Child Term Name
Is a GO:0000340 RNA 7-methylguanosine cap binding
Is a GO:0000341 RNA trimethylguanosine cap binding
Is a GO:0000342 RNA cap 4 binding

Protein Annotation

Displaying annotations FIRST to LAST of TOTAL Page size: Additional filters: Bookmarkable link
Database
Gene Product ID
Symbol
Qualifier
GO Identifier
GO Term Name
Aspect
Original GO ID
Original GO Term Name
Evidence
Reference
With
Taxon
Date
Assigned By
Product Form ID
Name
Synonym
Type
Taxon Name
Sequence

Export

Display options

ID Mapping

QuickGO maps between different identifier types by using a combination of mapping files provided by the databases, and using identifier cross-references supplied by UniProtKB.

If more than one identifier type needs to be used to map all required sequences, drag the selected databases to change the order in which identifiers are found.

Filter

Select

Grouped by
Annotation count
Protein count
Both

Co-occurring Terms

These tables show the number of times the term listed in the table has been co-annotated with GO:0000339. The terms are listed in descending order of number of times the term has been co-annotated.
The table on the left is calculated using both electronic and manual-evidenced annotations, while the table on the right is calculated using only manual-evidenced annotations.
Co-occurrence statistics for GO:0000339 based on the entire annotation set Co-occurrence statistics for GO:0000339 based on non-IEA annotations only

Change Log

All changes

Timestamp Action Category Detail
2010-10-11 Deleted DEFINITION Interacting selectively and non-covalently with a 7-methylguanosine (m7G) moiety or derivative located at the 5' end of an RNA molecule.
2010-10-11 Added DEFINITION Interacting selectively and non-covalently with a 7-methylguanosine (m7G) group or derivative located at the 5' end of an RNA molecule.
2009-07-03 Deleted DEFINITION Interacting selectively with a 7-methylguanosine (m7G) moiety or derivative located at the 5' end of an RNA molecule.
2009-07-03 Added DEFINITION Interacting selectively and non-covalently with a 7-methylguanosine (m7G) moiety or derivative located at the 5' end of an RNA molecule.
2008-05-13 Added DEFINITION Interacting selectively with a 7-methylguanosine (m7G) moiety or derivative located at the 5' end of an RNA molecule.
2008-05-12 Deleted DEFINITION Interacting selectively with a 7-methylguanosine (m7G) moiety or derivative located at the 5' end of an RNA molecule.
2008-04-01 Updated RELATION is a GO:0003723 (RNA binding)
2007-08-09 Added SYNONYM binding to mRNA cap
2007-08-09 Added SYNONYM mRNA cap binding
2007-08-09 Added SYNONYM snRNA cap binding
2007-08-09 Deleted SYNONYM mRNA cap binding
2007-08-09 Deleted SYNONYM snRNA cap binding
2007-08-09 Deleted SYNONYM binding to mRNA cap
2005-08-10 Added SYNONYM binding to mRNA cap
2005-08-10 Added SYNONYM mRNA cap binding
2005-08-10 Added SYNONYM snRNA cap binding
2003-06-10 Updated TERM RNA cap binding
2003-03-19 Updated TERM RNA cap binding activity
2002-11-27 Added DEFINITION Interacting selectively with a 7-methylguanosine (m7G) moiety or derivative located at the 5' end of an RNA molecule.
2002-11-23 Added TERM RNA cap binding

Term

Timestamp Action Category Detail
2003-06-10 Updated TERM RNA cap binding
2003-03-19 Updated TERM RNA cap binding activity
2002-11-23 Added TERM RNA cap binding

Definition/synonyms

Timestamp Action Category Detail
2010-10-11 Deleted DEFINITION Interacting selectively and non-covalently with a 7-methylguanosine (m7G) moiety or derivative located at the 5' end of an RNA molecule.
2010-10-11 Added DEFINITION Interacting selectively and non-covalently with a 7-methylguanosine (m7G) group or derivative located at the 5' end of an RNA molecule.
2009-07-03 Deleted DEFINITION Interacting selectively with a 7-methylguanosine (m7G) moiety or derivative located at the 5' end of an RNA molecule.
2009-07-03 Added DEFINITION Interacting selectively and non-covalently with a 7-methylguanosine (m7G) moiety or derivative located at the 5' end of an RNA molecule.
2008-05-13 Added DEFINITION Interacting selectively with a 7-methylguanosine (m7G) moiety or derivative located at the 5' end of an RNA molecule.
2008-05-12 Deleted DEFINITION Interacting selectively with a 7-methylguanosine (m7G) moiety or derivative located at the 5' end of an RNA molecule.
2007-08-09 Added SYNONYM binding to mRNA cap
2007-08-09 Added SYNONYM mRNA cap binding
2007-08-09 Added SYNONYM snRNA cap binding
2007-08-09 Deleted SYNONYM mRNA cap binding
2007-08-09 Deleted SYNONYM snRNA cap binding
2007-08-09 Deleted SYNONYM binding to mRNA cap
2005-08-10 Added SYNONYM binding to mRNA cap
2005-08-10 Added SYNONYM mRNA cap binding
2005-08-10 Added SYNONYM snRNA cap binding
2002-11-27 Added DEFINITION Interacting selectively with a 7-methylguanosine (m7G) moiety or derivative located at the 5' end of an RNA molecule.

Relationships

Timestamp Action Category Detail
2008-04-01 Updated RELATION is a GO:0003723 (RNA binding)
spacer
Please send comments, suggestions or bug reports to goa@ebi.ac.uk. Click here for details of how to cite UniProt-GOA and QuickGO.
11ms