spacer

GO:0000291 nuclear-transcribed mRNA catabolic process, exonucleolytic

Term Information

ID GO:0000291
Name nuclear-transcribed mRNA catabolic process, exonucleolytic
Ontology Biological Process
Definition The chemical reactions and pathways resulting in the breakdown of the transcript body of a nuclear-transcribed mRNA that occurs when the ends are not protected by the 5'-cap or the 3'-poly(A) tail.
GONUTS GO:0000291 Wiki Page

Synonyms

Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope. Click on the icon for more details.
Type Synonym
exact nuclear mRNA catabolic process, exonucleolytic
exact mRNA degradation, exonucleolytic
exact mRNA breakdown, exonucleolytic
exact exonucleolytic degradation of mRNA

Ancestor Chart

This chart is interactive; you can click on the term boxes and legend for more information.
Display options
Display
Key
GO IDs
Term box width
Term box height
Slim colours
Show children
Image size limit (in megapixels)
Note that setting the limit too high may result in images being generated slowly; it may even cause the browser to crash. The maximum limit is 20 megapixels.

Child Terms

This table lists all terms that are direct descendants (child terms) of GO:0000291:
Relationship To GO:0000291 Child Term Child Term Name
Is a GO:0034427 nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'
Is a GO:0034428 nuclear-transcribed mRNA catabolic process, exonucleolytic, 5'-3'
Is a GO:0043927 exonucleolytic nuclear-transcribed mRNA catabolic process involved in endonucleolytic cleavage-dependent decay
Is a GO:0043928 exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay
Is a GO:0070480 exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-independent decay

Protein Annotation

Displaying annotations FIRST to LAST of TOTAL Page size: Additional filters: Bookmarkable link
Database
Gene Product ID
Symbol
Qualifier
GO Identifier
GO Term Name
Aspect
Original GO ID
Original GO Term Name
Evidence
Reference
With
Taxon
Date
Assigned By
Product Form ID
Name
Synonym
Type
Taxon Name
Sequence

Export

Display options

ID Mapping

QuickGO maps between different identifier types by using a combination of mapping files provided by the databases, and using identifier cross-references supplied by UniProtKB.

If more than one identifier type needs to be used to map all required sequences, drag the selected databases to change the order in which identifiers are found.

Filter

Select

Grouped by
Annotation count
Protein count
Both

Co-occurring Terms

These tables show the number of times the term listed in the table has been co-annotated with GO:0000291. The terms are listed in descending order of number of times the term has been co-annotated.
The table on the left is calculated using both electronic and manual-evidenced annotations, while the table on the right is calculated using only manual-evidenced annotations.
Co-occurrence statistics for GO:0000291 based on the entire annotation set Co-occurrence statistics for GO:0000291 based on non-IEA annotations only

Change Log

All changes

Timestamp Action Category Detail
2008-07-12 Deleted RELATION part of GO:0000294 (nuclear-transcribed mRNA catabolic process, endonucleolytic cleavage-dependent decay)
2008-07-12 Deleted RELATION part of GO:0000288 (nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay)
2008-05-13 Added DEFINITION The chemical reactions and pathways resulting in the breakdown of the transcript body of a nuclear-transcribed mRNA that occurs when the ends are not protected by the 5'-cap or the 3'-poly(A) tail.
2008-05-12 Deleted DEFINITION The chemical reactions and pathways resulting in the breakdown of the transcript body of a nuclear-transcribed mRNA that occurs when the ends are not protected by the 5'-cap or the 3'-poly(A) tail.
2008-04-30 Added SYNONYM nuclear mRNA catabolic process, exonucleolytic
2008-04-30 Added RELATION is a GO:0000956 (nuclear-transcribed mRNA catabolic process)
2008-04-30 Deleted RELATION is a GO:0006402 (mRNA catabolic process)
2008-04-30 Updated TERM nuclear-transcribed mRNA catabolic process, exonucleolytic
2008-04-27 Updated DEFINITION The chemical reactions and pathways resulting in the breakdown of the transcript body of a nuclear-transcribed mRNA that occurs when the ends are not protected by the 5'-cap or the 3'-poly(A) tail.
2008-04-01 Updated RELATION part of GO:0000294 (nuclear-transcribed mRNA catabolic process, endonucleolytic cleavage-dependent decay)
2008-04-01 Updated RELATION part of GO:0000288 (nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay)
2008-04-01 Updated RELATION is a GO:0006402 (mRNA catabolic process)
2007-08-09 Added SYNONYM exonucleolytic degradation of mRNA
2007-08-09 Added SYNONYM mRNA breakdown, exonucleolytic
2007-08-09 Added SYNONYM mRNA degradation, exonucleolytic
2007-08-09 Deleted SYNONYM exonucleolytic degradation of mRNA
2007-08-09 Deleted SYNONYM mRNA breakdown, exonucleolytic
2007-08-09 Deleted SYNONYM mRNA degradation, exonucleolytic
2007-01-15 Updated TERM mRNA catabolic process, exonucleolytic
2006-05-04 Updated DEFINITION The chemical reactions and pathways resulting in the breakdown of the mRNA transcript body that occurs when the ends are not protected by the 5'-cap or the 3'-poly(A) tail.
2005-08-10 Added SYNONYM mRNA breakdown, exonucleolytic
2005-08-10 Added SYNONYM mRNA degradation, exonucleolytic
2004-04-19 Added SYNONYM exonucleolytic degradation of mRNA
2004-04-16 Deleted SYNONYM exonucleolytic degradation of mRNA
2002-11-27 Updated DEFINITION Degradation of the mRNA transcript body that occurs when the ends are not protected by the 5'-cap or the 3'-poly(A) tail.
2002-10-02 Updated TERM mRNA catabolism, exonucleolytic
2002-10-02 Added SYNONYM exonucleolytic degradation of mRNA
2001-08-06 Added DEFINITION Degradation of the mRNA transcript body that occurs when the ends are not protected by the 5'-cap or the 3'-poly(A) tail
2001-06-21 Added TERM exonucleolytic degradation of mRNA

Term

Timestamp Action Category Detail
2008-04-30 Updated TERM nuclear-transcribed mRNA catabolic process, exonucleolytic
2007-01-15 Updated TERM mRNA catabolic process, exonucleolytic
2002-10-02 Updated TERM mRNA catabolism, exonucleolytic
2001-06-21 Added TERM exonucleolytic degradation of mRNA

Definition/synonyms

Timestamp Action Category Detail
2008-05-13 Added DEFINITION The chemical reactions and pathways resulting in the breakdown of the transcript body of a nuclear-transcribed mRNA that occurs when the ends are not protected by the 5'-cap or the 3'-poly(A) tail.
2008-05-12 Deleted DEFINITION The chemical reactions and pathways resulting in the breakdown of the transcript body of a nuclear-transcribed mRNA that occurs when the ends are not protected by the 5'-cap or the 3'-poly(A) tail.
2008-04-30 Added SYNONYM nuclear mRNA catabolic process, exonucleolytic
2008-04-27 Updated DEFINITION The chemical reactions and pathways resulting in the breakdown of the transcript body of a nuclear-transcribed mRNA that occurs when the ends are not protected by the 5'-cap or the 3'-poly(A) tail.
2007-08-09 Added SYNONYM exonucleolytic degradation of mRNA
2007-08-09 Added SYNONYM mRNA breakdown, exonucleolytic
2007-08-09 Added SYNONYM mRNA degradation, exonucleolytic
2007-08-09 Deleted SYNONYM exonucleolytic degradation of mRNA
2007-08-09 Deleted SYNONYM mRNA breakdown, exonucleolytic
2007-08-09 Deleted SYNONYM mRNA degradation, exonucleolytic
2006-05-04 Updated DEFINITION The chemical reactions and pathways resulting in the breakdown of the mRNA transcript body that occurs when the ends are not protected by the 5'-cap or the 3'-poly(A) tail.
2005-08-10 Added SYNONYM mRNA breakdown, exonucleolytic
2005-08-10 Added SYNONYM mRNA degradation, exonucleolytic
2004-04-19 Added SYNONYM exonucleolytic degradation of mRNA
2004-04-16 Deleted SYNONYM exonucleolytic degradation of mRNA
2002-11-27 Updated DEFINITION Degradation of the mRNA transcript body that occurs when the ends are not protected by the 5'-cap or the 3'-poly(A) tail.
2002-10-02 Added SYNONYM exonucleolytic degradation of mRNA
2001-08-06 Added DEFINITION Degradation of the mRNA transcript body that occurs when the ends are not protected by the 5'-cap or the 3'-poly(A) tail

Relationships

Timestamp Action Category Detail
2008-07-12 Deleted RELATION part of GO:0000294 (nuclear-transcribed mRNA catabolic process, endonucleolytic cleavage-dependent decay)
2008-07-12 Deleted RELATION part of GO:0000288 (nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay)
2008-04-30 Added RELATION is a GO:0000956 (nuclear-transcribed mRNA catabolic process)
2008-04-30 Deleted RELATION is a GO:0006402 (mRNA catabolic process)
2008-04-01 Updated RELATION part of GO:0000294 (nuclear-transcribed mRNA catabolic process, endonucleolytic cleavage-dependent decay)
2008-04-01 Updated RELATION part of GO:0000288 (nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay)
2008-04-01 Updated RELATION is a GO:0006402 (mRNA catabolic process)
spacer
Please send comments, suggestions or bug reports to goa@ebi.ac.uk. Click here for details of how to cite UniProt-GOA and QuickGO.
13ms