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EBIDatabasesQuickGO

GO:0000154 rRNA modification

The covalent alteration of one or more nucleotides within an rRNA molecule to produce an rRNA molecule with a sequence that differs from that coded genetically.

Term Information

ID GO:0000154
Name rRNA modification
Ontology Biological Process
Definition The covalent alteration of one or more nucleotides within an rRNA molecule to produce an rRNA molecule with a sequence that differs from that coded genetically.
Comment The term 'RNA editing' (GO:0016547) was merged into 'RNA modification' (GO:0009451) on the basis of statements in the preface of Modification and Editing of RNA (ISBN:1555811337) that there is no clear distinction between modification and editing. Parallel changes were made for substrate (e.g. tRNA, rRNA, etc.) specific child terms of 'RNA editing'.

Synonyms

Type Synonym
exact rRNA editing

Cross-references associated with this term:

Database ID
INTERPRO IPR001737
INTERPRO IPR016909

Web service: term information

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GTerm?id=termID&format=format

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Ancestor Chart

Visual display of a section of the GO directed acyclic graph (DAG) for a single GO term. Terms in the GO are linked to parent (more general) terms and often to child (more specific) terms by one or more 'relationships'

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Chart

Ancestor Table

Alternative display of a section of the GO, providing a concise view of the relationships connecting GO terms

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GO:0008150 biological_process
GO:0009987 cellular process
GO:0044085 cellular component biogenesis
GO:0008152 metabolic process
GO:0006807 nitrogen compound metabolic process
GO:0043170 macromolecule metabolic process
GO:0044238 primary metabolic process
GO:0044237 cellular metabolic process
GO:0022613 ribonucleoprotein complex biogenesis
GO:0043283 biopolymer metabolic process
GO:0010467 gene expression
GO:0042254 ribosome biogenesis
GO:0043412 biopolymer modification
GO:0044260 cellular macromolecule metabolic process
GO:0006139 nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
GO:0034960 cellular biopolymer metabolic process
GO:0016070 RNA metabolic process
GO:0034660 ncRNA metabolic process
GO:0009451 RNA modification
GO:0006396 RNA processing
GO:0016072 rRNA metabolic process
GO:0034470 ncRNA processing
GO:0006364 rRNA processing
GO:0000154 rRNA modification

Relationship key

Code Relationship
part of
is a
regulates
+ve regulates
-ve regulates

Child Terms

All direct descendants (child terms) available for this GO term:
I GO:0031167 rRNA methylation
I GO:0031118 rRNA pseudouridine synthesis
I GO:0002110 cotranscriptional mitochondrial rRNA nucleotide insertion

Relationship key

CodeRelationship
Ppart of
Iis a

Protein Annotation

DB
ID
Qualifier colocalizes_with contributes_to NOT NOT|colocalizes_with NOT|contributes_to
GO Term
Reference
Evidence IMP IGI IPI IGC ISS IDA IEP IEA TAS NAS ND IC RCA ISA EXP
With
Taxonomy
From
Download limit
Format

Co-occurring Terms

Co-occurrence statistics

This display shows those GO terms which have been annotated to the same proteins as this term.
Terms may have been co-annotated either by electronic (IEA) or manual annotation methods. Users can decide which evidence code type should be used in the calculation of the co-occurence statistics.
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IMP IGI IPI IGC ISS IDA IEP IEA TAS NAS ND IC RCA ISA EXP Statistics may take up to 1 minute to calculate
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14ms
Stand-alone
Hostnametomcat-7.ebi.ac.uk
Uptime16:38 12/10/2009
Data version2009-11-24-04-03-40
Terminal
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