spacer

GO:0000112 nucleotide-excision repair factor 3 complex

Term Information

ID GO:0000112
Name nucleotide-excision repair factor 3 complex
Ontology Cellular Component
Definition One of several protein complexes involved in nucleotide-excision repair; possesses endodeoxynuclease and DNA helicase activities. In S. cerevisiae, it is composed of Rad2p and the core TFIIH-Ssl2p complex (core TFIIH is composed of Rad3p, Tfb1p, Tfb2p, Ssl1p, Tfb4p and Tfb5p. Note that Ssl2p is also called Rad25p).
PMID:10915862 PMID:14500720 PMID:7813015
Comment Note that process and function information are included in the term and definition for the purpose of describing and distinguishing the complex.
GONUTS GO:0000112 Wiki Page

Synonyms

Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope. Click on the icon for more details.
Type Synonym
exact NEF3 complex

Taxon Constraints

The use of this term should conform to the following taxon constraints:
Taxon Rule Ancestor GO ID Ancestor GO Term Name Relationship Taxon ID Taxon Reference(s)
GOTAX:0000057 GO:0005623 cell only_in_taxon 131567 cellular organisms
GOTAX:0000059 GO:0005634 nucleus only_in_taxon 2759 Eukaryota
More information on taxon constraints in GO is available here

Ancestor Chart

This chart is interactive; you can click on the term boxes and legend for more information.
Display options
Display
Key
GO IDs
Term box width
Term box height
Slim colours
Show children
Image size limit (in megapixels)
Note that setting the limit too high may result in images being generated slowly; it may even cause the browser to crash. The maximum limit is 20 megapixels.

Child Terms

This table lists all terms that are direct descendants (child terms) of GO:0000112:
Relationship To GO:0000112 Child Term Child Term Name
Has part GO:0000439 core TFIIH complex

Protein Annotation

Displaying annotations FIRST to LAST of TOTAL Page size: Additional filters: Bookmarkable link
Database
Gene Product ID
Symbol
Qualifier
GO Identifier
GO Term Name
Aspect
Original GO ID
Original GO Term Name
Evidence
Reference
With
Taxon
Date
Assigned By
Product Form ID
Name
Synonym
Type
Taxon Name
Sequence

Export

Display options

ID Mapping

QuickGO maps between different identifier types by using a combination of mapping files provided by the databases, and using identifier cross-references supplied by UniProtKB.

If more than one identifier type needs to be used to map all required sequences, drag the selected databases to change the order in which identifiers are found.

Filter

Select

Grouped by
Annotation count
Protein count
Both

Co-occurring Terms

These tables show the number of times the term listed in the table has been co-annotated with GO:0000112. The terms are listed in descending order of number of times the term has been co-annotated.
The table on the left is calculated using both electronic and manual-evidenced annotations, while the table on the right is calculated using only manual-evidenced annotations.
Co-occurrence statistics for GO:0000112 based on the entire annotation set Co-occurrence statistics for GO:0000112 based on non-IEA annotations only

Change Log

All changes

Timestamp Action Category Detail
2014-03-08 Deleted DEFINITION One of several protein complexes involved in nucleotide-excision repair; possesses endodeoxynuclease and DNA helicase activities. In S. cerevisiae, it is composed of Rad2p and the core TFIIH-Ssl2p complex (Core TFIIH is composed of Rad3p, Tfb1p, Tfb2p, Ssl1p, and Tfb4p. Note that Ssl2p is also called Rad25p).
2014-03-08 Added DEFINITION One of several protein complexes involved in nucleotide-excision repair; possesses endodeoxynuclease and DNA helicase activities. In S. cerevisiae, it is composed of Rad2p and the core TFIIH-Ssl2p complex (core TFIIH is composed of Rad3p, Tfb1p, Tfb2p, Ssl1p, Tfb4p and Tfb5p. Note that Ssl2p is also called Rad25p).
2008-05-13 Added DEFINITION One of several protein complexes involved in nucleotide-excision repair; possesses endodeoxynuclease and DNA helicase activities. In S. cerevisiae, it is composed of Rad2p and the core TFIIH-Ssl2p complex (Core TFIIH is composed of Rad3p, Tfb1p, Tfb2p, Ssl1p, and Tfb4p. Note that Ssl2p is also called Rad25p).
2008-05-12 Deleted DEFINITION One of several protein complexes involved in nucleotide-excision repair; possesses endodeoxynuclease and DNA helicase activities. In S. cerevisiae, it is composed of Rad2p and the core TFIIH-Ssl2p complex (Core TFIIH is composed of Rad3p, Tfb1p, Tfb2p, Ssl1p, and Tfb4p. Note that Ssl2p is also called Rad25p).
2008-04-01 Updated RELATION is a GO:0000109 (nucleotide-excision repair complex)
2007-08-09 Added SYNONYM NEF3 complex
2007-08-09 Deleted SYNONYM NEF3 complex
2007-07-27 Updated DEFINITION One of several protein complexes involved in nucleotide-excision repair; possesses endodeoxynuclease and DNA helicase activities. In S. cerevisiae, it is composed of Rad2p and the core TFIIH-Ssl2p complex (Core TFIIH is composed of Rad3p, Tfb1p, Tfb2p, Ssl1p, and Tfb4p. Note that Ssl2p is also called Rad25p).
2007-03-06 Updated DEFINITION One of several protein complexes involved in nucleotide-excision repair; possesses endodeoxynuclease and DNA helicase activities. In S. cerevisiae, it is composed of Rad2p and the core TFIIH-Ssl2p complex (Core TFIIH is composed of Rad3, Tfb1, Tfb2, Ssl1, and Tfb4. Note that Ssl2p is also called Rad25).
2005-10-02 Updated TERM nucleotide-excision repair factor 3 complex
2005-09-30 Updated DEFINITION One of several protein complexes involved in nucleotide-excision repair; possesses endodeoxynuclease and DNA helicase activities.
2004-03-23 Added DEFINITION One of several protein complexes involved in nucleotide excision repair; possesses endodeoxynuclease and DNA helicase activities.
2004-03-18 Deleted SYNONYM NEF3
2004-03-18 Added SYNONYM NEF3 complex
2002-11-01 Updated TERM nucleotide excision repair factor 3 complex
2002-02-06 Updated TERM nucleotide excision repair factor 3
2001-04-03 Updated TERM nucleotide excision repair factor 3
2001-03-30 Added SYNONYM NEF3
2001-03-30 Added TERM nucleotide excision repair factor 3

Term

Timestamp Action Category Detail
2005-10-02 Updated TERM nucleotide-excision repair factor 3 complex
2002-11-01 Updated TERM nucleotide excision repair factor 3 complex
2002-02-06 Updated TERM nucleotide excision repair factor 3
2001-04-03 Updated TERM nucleotide excision repair factor 3
2001-03-30 Added TERM nucleotide excision repair factor 3

Definition/synonyms

Timestamp Action Category Detail
2014-03-08 Deleted DEFINITION One of several protein complexes involved in nucleotide-excision repair; possesses endodeoxynuclease and DNA helicase activities. In S. cerevisiae, it is composed of Rad2p and the core TFIIH-Ssl2p complex (Core TFIIH is composed of Rad3p, Tfb1p, Tfb2p, Ssl1p, and Tfb4p. Note that Ssl2p is also called Rad25p).
2014-03-08 Added DEFINITION One of several protein complexes involved in nucleotide-excision repair; possesses endodeoxynuclease and DNA helicase activities. In S. cerevisiae, it is composed of Rad2p and the core TFIIH-Ssl2p complex (core TFIIH is composed of Rad3p, Tfb1p, Tfb2p, Ssl1p, Tfb4p and Tfb5p. Note that Ssl2p is also called Rad25p).
2008-05-13 Added DEFINITION One of several protein complexes involved in nucleotide-excision repair; possesses endodeoxynuclease and DNA helicase activities. In S. cerevisiae, it is composed of Rad2p and the core TFIIH-Ssl2p complex (Core TFIIH is composed of Rad3p, Tfb1p, Tfb2p, Ssl1p, and Tfb4p. Note that Ssl2p is also called Rad25p).
2008-05-12 Deleted DEFINITION One of several protein complexes involved in nucleotide-excision repair; possesses endodeoxynuclease and DNA helicase activities. In S. cerevisiae, it is composed of Rad2p and the core TFIIH-Ssl2p complex (Core TFIIH is composed of Rad3p, Tfb1p, Tfb2p, Ssl1p, and Tfb4p. Note that Ssl2p is also called Rad25p).
2007-08-09 Added SYNONYM NEF3 complex
2007-08-09 Deleted SYNONYM NEF3 complex
2007-07-27 Updated DEFINITION One of several protein complexes involved in nucleotide-excision repair; possesses endodeoxynuclease and DNA helicase activities. In S. cerevisiae, it is composed of Rad2p and the core TFIIH-Ssl2p complex (Core TFIIH is composed of Rad3p, Tfb1p, Tfb2p, Ssl1p, and Tfb4p. Note that Ssl2p is also called Rad25p).
2007-03-06 Updated DEFINITION One of several protein complexes involved in nucleotide-excision repair; possesses endodeoxynuclease and DNA helicase activities. In S. cerevisiae, it is composed of Rad2p and the core TFIIH-Ssl2p complex (Core TFIIH is composed of Rad3, Tfb1, Tfb2, Ssl1, and Tfb4. Note that Ssl2p is also called Rad25).
2005-09-30 Updated DEFINITION One of several protein complexes involved in nucleotide-excision repair; possesses endodeoxynuclease and DNA helicase activities.
2004-03-23 Added DEFINITION One of several protein complexes involved in nucleotide excision repair; possesses endodeoxynuclease and DNA helicase activities.
2004-03-18 Deleted SYNONYM NEF3
2004-03-18 Added SYNONYM NEF3 complex
2001-03-30 Added SYNONYM NEF3

Relationships

Timestamp Action Category Detail
2008-04-01 Updated RELATION is a GO:0000109 (nucleotide-excision repair complex)
spacer
Please send comments, suggestions or bug reports to goa@ebi.ac.uk. Click here for details of how to cite UniProt-GOA and QuickGO.
11ms