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GO Term History: Displaying 224 audit records for all terms for the date 2008-09-06

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Introduction

This page displays the differences recorded in the full Gene Ontology OBO v1.2 file as audited by the UniProt-GOA database during its daily update cycle.
If there is any delay in uploading the current OBO file, the changes displayed and the date recorded for these changes may not correspond to when the changes to the OBO file were committed.

All changes

Timestamp GO ID GO Term Name Action Category Detail
2008-09-06 GO:0034757 negative regulation of iron ion transport Added TERM negative regulation of iron ion transport
2008-09-06 GO:0034758 positive regulation of iron ion transport Added TERM positive regulation of iron ion transport
2008-09-06 GO:0034759 regulation of iron ion transmembrane transport Added TERM regulation of transmembrane iron ion transport
2008-09-06 GO:0034760 negative regulation of iron ion transmembrane transport Added TERM negative regulation of transmembrane iron ion transport
2008-09-06 GO:0034761 positive regulation of iron ion transmembrane transport Added TERM positive regulation of transmembrane iron ion transport
2008-09-06 GO:0034762 regulation of transmembrane transport Added TERM regulation of transmembrane transport
2008-09-06 GO:0034763 negative regulation of transmembrane transport Added TERM negative regulation of transmembrane transport
2008-09-06 GO:0034764 positive regulation of transmembrane transport Added TERM positive regulation of transmembrane transport
2008-09-06 GO:0034765 regulation of ion transmembrane transport Added TERM regulation of transmembrane ion transport
2008-09-06 GO:0034766 negative regulation of ion transmembrane transport Added TERM negative regulation of transmembrane ion transport
2008-09-06 GO:0034767 positive regulation of ion transmembrane transport Added TERM positive regulation of transmembrane ion transport
2008-09-06 GO:0042180 cellular ketone metabolic process Updated TERM cellular ketone metabolic process
2008-09-06 GO:0043446 cellular alkane metabolic process Updated TERM cellular alkane metabolic process
2008-09-06 GO:0043449 cellular alkene metabolic process Updated TERM cellular alkene metabolic process
2008-09-06 GO:0043452 cellular alkyne metabolic process Updated TERM cellular alkyne metabolic process
2008-09-06 GO:0043603 cellular amide metabolic process Updated TERM cellular amide metabolic process
2008-09-06 GO:0043094 cellular metabolic compound salvage Updated TERM cellular metabolic compound salvage
2008-09-06 GO:0055121 response to high fluence blue light stimulus by blue high-fluence system Added TERM response to high fluence blue light stimulus by blue high-fluence system
2008-09-06 GO:0055122 response to very low light intensity stimulus Added TERM response to very low light intensity stimulus
2008-09-06 GO:0046950 cellular ketone body metabolic process Updated TERM cellular ketone body metabolic process
2008-09-06 GO:0006066 alcohol metabolic process Updated TERM cellular alcohol metabolic process
2008-09-06 GO:0006081 cellular aldehyde metabolic process Updated TERM cellular aldehyde metabolic process
2008-09-06 GO:0006519 cellular amino acid and derivative metabolic process Updated TERM cellular amino acid and derivative metabolic process
2008-09-06 GO:0006725 cellular aromatic compound metabolic process Updated TERM cellular aromatic compound metabolic process
2008-09-06 GO:0009645 response to low light intensity stimulus Updated TERM response to low light intensity stimulus
2008-09-06 GO:0010201 response to continuous far red light stimulus by the high-irradiance response system Updated TERM response to continuous far red light stimulus by the high-irradiance response system
2008-09-06 GO:0010202 response to low fluence red light stimulus Updated TERM response to low fluence red light stimulus
2008-09-06 GO:0010203 response to very low fluence red light stimulus Updated TERM response to very low fluence red light stimulus
2008-09-06 GO:0010244 response to low fluence blue light stimulus by blue low-fluence system Updated TERM response to low fluence blue light stimulus by blue low-fluence system
2008-09-06 GO:0009308 amine metabolic process Updated TERM cellular amine metabolic process
2008-09-06 GO:0010687 site selection involved in cell cycle cytokinesis Added TERM cytokinesis during cell cycle, site selection
2008-09-06 GO:0030719 P granule organization Updated TERM P granule organization and biogenesis
2008-09-06 GO:0010203 response to very low fluence red light stimulus Deleted DEFINITION A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a very low fluence red light stimulus. Very low fluence red light is short pulses of very low fluence light followed by darkness, which occurs at light levels of less than 0.001 mmol/m2/sec red light and is not far-red reversible.
2008-09-06 GO:0016513 core-binding factor complex Deleted DEFINITION A heterodimeric transcription factor complex that contains an alpha subunit (Runx1, Runx2 or Runx3 in human) that binds DNA and a non-DNA-binding beta subunit (CBFbeta), and binds to a consensus sequence 5'-YGYGGTY-3' found in several enhancers and promoters; the beta subunit enhances the DNA binding of the alpha subunit.
2008-09-06 GO:0005882 intermediate filament Deleted DEFINITION A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filamentss; and Type V, lamins.
2008-09-06 GO:0031389 Rad17 RFC-like complex Deleted DEFINITION A pentameric protein complex related to replication factor C, which loads a trimeric complex of checkpoint proteins (known as the checkpoint clamp or 9-1-1 complex) onto DNA at damage sites; functions in DNA damage cell cycle checkpoints. In Schizosaccharomyces pombe the subunits are known as Rad17, Rfc2, Rfc3, Rfc4, and Rfc5, while in Saccharomyces cerevisiae the subunits are known as Rad24p, Rfc2p, Rfc3p, Rfc4p, and Rfc5p.
2008-09-06 GO:0043186 P granule Deleted DEFINITION A small protein and RNA containing electron dense organelle, not surrounded by a membrane, that is associated with germ nuclei in the nematode gonad and localized to germ cells and their precursors throughout development.
2008-09-06 GO:0005882 intermediate filament Added DEFINITION A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filamentss; and Type V, lamins.
2008-09-06 GO:0006066 alcohol metabolic process Added DEFINITION The chemical reactions and pathways involving alcohols, any of a class of compounds containing one or more hydroxyl groups attached to a saturated carbon atom, as carried out by individual cells.
2008-09-06 GO:0006081 cellular aldehyde metabolic process Added DEFINITION The chemical reactions and pathways involving aldehydes, any organic compound with the formula R-CH=O, as carried out by individual cells.
2008-09-06 GO:0006519 cellular amino acid and derivative metabolic process Added DEFINITION The chemical reactions and pathways involving amino acids, organic acids containing one or more amino substituents, and compounds derived from amino acids, as carried out by individual cells.
2008-09-06 GO:0006725 cellular aromatic compound metabolic process Added DEFINITION The chemical reactions and pathways involving aromatic compounds, any organic compound characterized by one or more planar rings, each of which contains conjugated double bonds and delocalized pi electrons, as carried out by individual cells.
2008-09-06 GO:0009308 amine metabolic process Added DEFINITION The chemical reactions and pathways involving any organic compound that is weakly basic in character and contains an amino or a substituted amino group, as carried out by individual cells. Amines are called primary, secondary, or tertiary according to whether one, two, or three carbon atoms are attached to the nitrogen atom.
2008-09-06 GO:0009637 response to blue light Added DEFINITION A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a blue light stimulus. Blue light is electromagnetic radiation with a wavelength of between 440 and 500nm.
2008-09-06 GO:0009645 response to low light intensity stimulus Added DEFINITION A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a low light intensity stimulus. Low light intensity is defined as a level of electromagnetic radiation at or below 0.1 micromols/m2.
2008-09-06 GO:0009906 response to photoperiod, blue light Added DEFINITION A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of the detection of a blue light photoperiod stimulus. Blue light is electromagnetic radiation with a wavelength of between 440 and 500nm.
2008-09-06 GO:0009907 response to photoperiod, red light Added DEFINITION A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a red light photoperiod stimulus. Red light is electromagnetic radiation of wavelength of 580-700nm.
2008-09-06 GO:0010017 red or far-red light signaling pathway Added DEFINITION The series of molecular signals initiated upon sensing by photoreceptor molecules of red light or far red light. Red light is electromagnetic radiation of wavelength of 580-700nm. Far red light is electromagnetic radiation of wavelength 700-800nm. An example of this response is seen at the beginning of many plant species developmental stages. These include germination, and the point when cotyledon expansion is triggered. In certain species these processes take place in response to absorption of red light by the pigment molecule phytochrome, but the signal can be reversed by exposure to far red light. During the initial phase the phytochrome molecule is only present in the red light absorbing form, but on absorption of red light it changes to a far red light absorbing form, triggering progress through development. An immediate short period of exposure to far red light entirely returns the pigment to its initial state and prevents triggering of the developmental process. A thirty minute break between red and subsequent far red light exposure renders the red light effect irreversible, and development then occurs regardless of whether far red light exposure subsequently occurs.
2008-09-06 GO:0009639 response to red or far red light Added DEFINITION A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a red or far red light stimulus. Red light is electromagnetic radiation of wavelength of 580-700nm. Far red light is electromagnetic radiation of wavelength 700-800nm. An example of this response is seen at the beginning of many plant species developmental stages. These include germination, and the point when cotyledon expansion is triggered. In certain species these processes take place in response to absorption of red light by the pigment molecule phytochrome, but the signal can be reversed by exposure to far red light. During the initial phase the phytochrome molecule is only present in the red light absorbing form, but on absorption of red light it changes to a far red light absorbing form, triggering progress through development. An immediate short period of exposure to far red light entirely returns the pigment to its initial state and prevents triggering of the developmental process. A thirty minute break between red and subsequent far red light exposure renders the red light effect irreversible, and development then occurs regardless of whether far red light exposure subsequently occurs.
2008-09-06 GO:0034754 cellular hormone metabolic process Added TERM cellular hormone metabolic process
2008-09-06 GO:0034755 iron ion transmembrane transport Added TERM transmembrane iron ion transport
2008-09-06 GO:0034756 regulation of iron ion transport Added TERM regulation of iron ion transport
2008-09-06 GO:0010114 response to red light Added DEFINITION A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a red light stimulus. Red light is electromagnetic radiation of wavelength of 580-700nm. An example of this response is seen at the beginning of many plant species developmental stages. These include germination, and the point when cotyledon expansion is triggered. In certain species these processes take place in response to absorption of red light by the pigment molecule phytochrome, but the signal can be reversed by exposure to far red light. During the initial phase the phytochrome molecule is only present in the red light absorbing form, but on absorption of red light it changes to a far red light absorbing form, triggering progress through development. An immediate short period of exposure to far red light entirely returns the pigment to its initial state and prevents triggering of the developmental process. A thirty minute break between red and subsequent far red light exposure renders the red light effect irreversible, and development then occurs regardless of whether far red light exposure subsequently occurs.
2008-09-06 GO:0016513 core-binding factor complex Added DEFINITION A heterodimeric transcription factor complex that contains an alpha subunit (Runx1, Runx2 or Runx3 in human) that binds DNA and a non-DNA-binding beta subunit (CBFbeta), and binds to a consensus sequence 5'-YGYGGTY-3' found in several enhancers and promoters; the beta subunit enhances the DNA binding of the alpha subunit.
2008-09-06 GO:0031389 Rad17 RFC-like complex Added DEFINITION A pentameric protein complex related to replication factor C, which loads a trimeric complex of checkpoint proteins (known as the checkpoint clamp or 9-1-1 complex) onto DNA at damage sites; functions in DNA damage cell cycle checkpoints. In Schizosaccharomyces pombe the subunits are known as Rad17, Rfc2, Rfc3, Rfc4, and Rfc5, while in Saccharomyces cerevisiae the subunits are known as Rad24p, Rfc2p, Rfc3p, Rfc4p, and Rfc5p.
2008-09-06 GO:0034754 cellular hormone metabolic process Added DEFINITION The chemical reactions and pathways involving any hormone, naturally occurring substances secreted by specialized cells that affects the metabolism or behavior of other cells possessing functional receptors for the hormone, as carried out by individual cells.
2008-09-06 GO:0034755 iron ion transmembrane transport Added DEFINITION A process whereby an iron ion is transported from one side of a membrane to the other.
2008-09-06 GO:0034756 regulation of iron ion transport Added DEFINITION Any process that modulates the frequency, rate or extent of the directed movement of iron ions (Fe) into, out of, within or between cells.
2008-09-06 GO:0034757 negative regulation of iron ion transport Added DEFINITION Any process that stops, prevents or reduces the frequency, rate or extent of the directed movement of iron ions into, out of, within or between cells.
2008-09-06 GO:0034758 positive regulation of iron ion transport Added DEFINITION Any process that activates or increases the frequency, rate or extent of the directed movement of iron ions into, out of, within or between cells.
2008-09-06 GO:0034759 regulation of iron ion transmembrane transport Added DEFINITION Any process that modulates the frequency, rate or extent of the directed movement of iron ions (Fe) from one side of a membrane to the other.
2008-09-06 GO:0043094 cellular metabolic compound salvage Deleted DEFINITION Any process which produces a useful metabolic compound from derivatives of it without de novo synthesis.
2008-09-06 GO:0046950 cellular ketone body metabolic process Deleted DEFINITION The chemical reactions and pathways involving ketone bodies, any one of the three substances: acetoacetate, D-3-hydroxybutyrate (beta-hydroxybutyrate) or acetone. Although 3-hydroxybutyrate is not a ketone, it is classed as a ketone body because it exists in an equilibrium with acetoacetate. Ketone bodies may accumulate in excessive amounts in the body in starvation, diabetes mellitus or in other defects of carbohydrate metabolism.
2008-09-06 GO:0042180 cellular ketone metabolic process Deleted DEFINITION The chemical reactions and pathways involving any of a class of organic compounds that contain the carbonyl group, CO, and in which the carbonyl group is bonded only to carbon atoms. The general formula for a ketone is RCOR, where R and R are alkyl or aryl groups.
2008-09-06 GO:0010018 far-red light signaling pathway Deleted DEFINITION The series of molecular signals initiated upon sensing of far red light by photoreceptor molecule at 730 nm.
2008-09-06 GO:0006066 alcohol metabolic process Deleted DEFINITION The chemical reactions and pathways involving alcohols, any of a class of compounds containing one or more hydroxyl groups attached to a saturated carbon atom.
2008-09-06 GO:0006081 cellular aldehyde metabolic process Deleted DEFINITION The chemical reactions and pathways involving aldehydes, any organic compound with the formula R-CH=O.
2008-09-06 GO:0043446 cellular alkane metabolic process Deleted DEFINITION The chemical reactions and pathways involving an alkane, any saturated hydrocarbon without cycles.
2008-09-06 GO:0043449 cellular alkene metabolic process Deleted DEFINITION The chemical reactions and pathways involving an alkene, unsaturated hydrocarbons containing at least one carbon-carbon double bond.
2008-09-06 GO:0043452 cellular alkyne metabolic process Deleted DEFINITION The chemical reactions and pathways involving an alkyne, any hydrocarbon that has at least one triple bond between two carbon atoms.
2008-09-06 GO:0006725 cellular aromatic compound metabolic process Deleted DEFINITION The chemical reactions and pathways involving aromatic compounds, any organic compound characterized by one or more planar rings, each of which contains conjugated double bonds and delocalized pi electrons.
2008-09-06 GO:0043603 cellular amide metabolic process Deleted DEFINITION The chemical reactions and pathways involving an amide, any derivative of an oxoacid in which an acidic hydroxy group has been replaced by an amino or substituted amino group.
2008-09-06 GO:0009308 amine metabolic process Deleted DEFINITION The chemical reactions and pathways involving any organic compound that is weakly basic in character and contains an amino or a substituted amino group. Amines are called primary, secondary, or tertiary according to whether one, two, or three carbon atoms are attached to the nitrogen atom.
2008-09-06 GO:0006519 cellular amino acid and derivative metabolic process Deleted DEFINITION The chemical reactions and pathways involving amino acids, organic acids containing one or more amino substituents, and compounds derived from amino acids.
2008-09-06 GO:0035194 posttranscriptional gene silencing by RNA Deleted DEFINITION Any process of gene inactivation (silencing) in which small RNAs trigger degradation of mRNA.
2008-09-06 GO:0010161 red light signaling pathway Deleted DEFINITION The series of molecular signals initiated upon sensing of red light by photoreceptor molecule at 660 nm.
2008-09-06 GO:0010017 red or far-red light signaling pathway Deleted DEFINITION The series of molecular signals initiated upon sensing by photoreceptor molecules of red light at 660nm or far red light at 730nm.
2008-09-06 GO:0009637 response to blue light Deleted DEFINITION A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a blue light stimulus. Blue light has a wavelength of between 440 and 500nm.
2008-09-06 GO:0010218 response to far red light Deleted DEFINITION A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a far red light stimulus. Far red light has a wavelength of around 740nm.
2008-09-06 GO:0010201 response to continuous far red light stimulus by the high-irradiance response system Deleted DEFINITION A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a high irradiance stimulus, continuous exposure to low levels of far-red light for a prolonged period of time and is not far-red reversible.
2008-09-06 GO:0010244 response to low fluence blue light stimulus by blue low-fluence system Deleted DEFINITION A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a low fluence blue light stimulus. Low fluence blue light is blue light (threshold 0.1 mmol/m2/sec); excitation of the Blue Low Fluence (BLF)-System induces the transcription of a number of nuclear and plastid coded genes.
2008-09-06 GO:0010202 response to low fluence red light stimulus Deleted DEFINITION A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a low fluence red light stimulus. Low fluence red light is red light pulses followed by darkness, which occurs at red light levels of 0.001-0.1 mmol/m2/sec and is red/far-red reversible.
2008-09-06 GO:0009645 response to low light intensity stimulus Deleted DEFINITION A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a low light intensity stimulus.
2008-09-06 GO:0009906 response to photoperiod, blue light Deleted DEFINITION A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a blue light (light with a wavelength of between 440 and 500nm) photoperiod stimulus.
2008-09-06 GO:0009907 response to photoperiod, red light Deleted DEFINITION A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a red light (light with a wavelength of between 620 and 700nm) photoperiod stimulus.
2008-09-06 GO:0009639 response to red or far red light Deleted DEFINITION A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a red or far red light stimulus. Red and far red light is that with a wavelength of above 620nm.
2008-09-06 GO:0010114 response to red light Deleted DEFINITION A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a red light stimulus. Red light has a wavelength of between 620 and 700nm.
2008-09-06 GO:0034763 negative regulation of transmembrane transport Added SYNONYM downregulation of transmembrane transport
2008-09-06 GO:0034763 negative regulation of transmembrane transport Added SYNONYM inhibition of transmembrane transport
2008-09-06 GO:0034764 positive regulation of transmembrane transport Added SYNONYM activation of transmembrane transport
2008-09-06 GO:0034764 positive regulation of transmembrane transport Added SYNONYM positive regulation of transmembrane transport
2008-09-06 GO:0034764 positive regulation of transmembrane transport Added SYNONYM stimulation of transmembrane transport
2008-09-06 GO:0034764 positive regulation of transmembrane transport Added SYNONYM up regulation of transmembrane transport
2008-09-06 GO:0034764 positive regulation of transmembrane transport Added SYNONYM up-regulation of transmembrane transport
2008-09-06 GO:0034764 positive regulation of transmembrane transport Added SYNONYM upregulation of transmembrane transport
2008-09-06 GO:0034766 negative regulation of ion transmembrane transport Added SYNONYM down regulation of transmembrane ion transport
2008-09-06 GO:0034766 negative regulation of ion transmembrane transport Added SYNONYM down-regulation of transmembrane ion transport
2008-09-06 GO:0034766 negative regulation of ion transmembrane transport Added SYNONYM downregulation of transmembrane ion transport
2008-09-06 GO:0034766 negative regulation of ion transmembrane transport Added SYNONYM inhibition of transmembrane ion transport
2008-09-06 GO:0034767 positive regulation of ion transmembrane transport Added SYNONYM activation of transmembrane ion transport
2008-09-06 GO:0034767 positive regulation of ion transmembrane transport Added SYNONYM positive regulation of transmembrane transport
2008-09-06 GO:0034767 positive regulation of ion transmembrane transport Added SYNONYM stimulation of transmembrane ion transport
2008-09-06 GO:0034767 positive regulation of ion transmembrane transport Added SYNONYM up regulation of transmembrane ion transport
2008-09-06 GO:0034767 positive regulation of ion transmembrane transport Added SYNONYM up-regulation of transmembrane ion transport
2008-09-06 GO:0034767 positive regulation of ion transmembrane transport Added SYNONYM upregulation of transmembrane ion transport
2008-09-06 GO:0043110 rDNA spacer replication fork barrier binding Added SYNONYM RTS1 barrier binding
2008-09-06 GO:0043110 rDNA spacer replication fork barrier binding Added SYNONYM RTS1 element binding
2008-09-06 GO:0055121 response to high fluence blue light stimulus by blue high-fluence system Added SYNONYM response to high fluence blue light
2008-09-06 GO:0055121 response to high fluence blue light stimulus by blue high-fluence system Added SYNONYM response to high fluence blue light by bhf system
2008-09-06 GO:0010244 response to low fluence blue light stimulus by blue low-fluence system Added SYNONYM response to low fluence blue light
2008-09-06 GO:0010244 response to low fluence blue light stimulus by blue low-fluence system Added SYNONYM response to low fluence blue light by blf system
2008-09-06 GO:0030719 P granule organization Added SYNONYM polar granule organization and biogenesis
2008-09-06 GO:0034755 iron ion transmembrane transport Added SYNONYM transmembrane iron transport
2008-09-06 GO:0034756 regulation of iron ion transport Added SYNONYM regulation of Fe transport
2008-09-06 GO:0034760 negative regulation of iron ion transmembrane transport Added DEFINITION Any process that stops, prevents or reduces the frequency, rate or extent of the directed movement of iron ions from one side of a membrane to the other.
2008-09-06 GO:0034761 positive regulation of iron ion transmembrane transport Added DEFINITION Any process that activates or increases the frequency, rate or extent of the directed movement of iron ions from one side of a membrane to the other.
2008-09-06 GO:0034762 regulation of transmembrane transport Added DEFINITION Any process that modulates the frequency, rate or extent of the directed movement of a solute from one side of a membrane to the other.
2008-09-06 GO:0034763 negative regulation of transmembrane transport Added DEFINITION Any process that stops, prevents or reduces the frequency, rate or extent of the directed movement of a solute from one side of a membrane to the other.
2008-09-06 GO:0034764 positive regulation of transmembrane transport Added DEFINITION Any process that activates or increases the frequency, rate or extent of the directed movement of a solute from one side of a membrane to the other.
2008-09-06 GO:0034765 regulation of ion transmembrane transport Added DEFINITION Any process that modulates the frequency, rate or extent of the directed movement of ions from one side of a membrane to the other.
2008-09-06 GO:0034766 negative regulation of ion transmembrane transport Added DEFINITION Any process that stops, prevents or reduces the frequency, rate or extent of the directed movement of ions from one side of a membrane to the other.
2008-09-06 GO:0034767 positive regulation of ion transmembrane transport Added DEFINITION Any process that activates or increases the frequency, rate or extent of the directed movement of ions from one side of a membrane to the other.
2008-09-06 GO:0035194 posttranscriptional gene silencing by RNA Added DEFINITION Any process of posttranscriptional gene inactivation (silencing) mediated by small RNA molecules that may trigger mRNA degradation or negatively regulate translation.
2008-09-06 GO:0042180 cellular ketone metabolic process Added DEFINITION The chemical reactions and pathways involving any of a class of organic compounds that contain the carbonyl group, CO, and in which the carbonyl group is bonded only to carbon atoms, as carried out by individual cells. The general formula for a ketone is RCOR, where R and R are alkyl or aryl groups.
2008-09-06 GO:0043094 cellular metabolic compound salvage Added DEFINITION Any process which produces a useful metabolic compound from derivatives of it without de novo synthesis, as carried out by individual cells.
2008-09-06 GO:0043186 P granule Added DEFINITION A small cytoplasmic, non-membranous RNA/protein complex aggregates in the primordial germ cells of many higher eukaryotes.
2008-09-06 GO:0043446 cellular alkane metabolic process Added DEFINITION The chemical reactions and pathways involving an alkane, any saturated hydrocarbon without cycles, as carried out by individual cells.
2008-09-06 GO:0043449 cellular alkene metabolic process Added DEFINITION The chemical reactions and pathways involving an alkene, unsaturated hydrocarbons containing at least one carbon-carbon double bond, as carried out by individual cells.
2008-09-06 GO:0043452 cellular alkyne metabolic process Added DEFINITION The chemical reactions and pathways involving an alkyne, any hydrocarbon that has at least one triple bond between two carbon atoms, as carried out by individual cells.
2008-09-06 GO:0043603 cellular amide metabolic process Added DEFINITION The chemical reactions and pathways involving an amide, any derivative of an oxoacid in which an acidic hydroxy group has been replaced by an amino or substituted amino group, as carried out by individual cells.
2008-09-06 GO:0046950 cellular ketone body metabolic process Added DEFINITION The chemical reactions and pathways involving ketone bodies, any one of the three substances: acetoacetate, D-3-hydroxybutyrate (beta-hydroxybutyrate) or acetone, as carried out by individual cells. Although 3-hydroxybutyrate is not a ketone, it is classed as a ketone body because it exists in an equilibrium with acetoacetate. Ketone bodies may accumulate in excessive amounts in the body in starvation, diabetes mellitus or in other defects of carbohydrate metabolism.
2008-09-06 GO:0055121 response to high fluence blue light stimulus by blue high-fluence system Added DEFINITION A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of the detection of a high fluence blue light stimulus by the blue high-fluence system. Blue light is electromagnetic radiation with a wavelength of between 440 and 500nm. The blue high-fluence system responds to blue light at levels between 100 and 1000 micromols/m2.
2008-09-06 GO:0010018 far-red light signaling pathway Added DEFINITION The series of molecular signals initiated upon sensing of far red light by a photoreceptor molecule. Far red light is electromagnetic radiation of wavelength 700-800nm. An example of this response is seen at the beginning of many plant species developmental stages. These include germination, and the point when cotyledon expansion is triggered. In certain species these processes take place in response to absorption of red light by the pigment molecule phytochrome, but the signal can be reversed by exposure to far red light. During the initial phase the phytochrome molecule is only present in the red light absorbing form, but on absorption of red light it changes to a far red light absorbing form, triggering progress through development. An immediate short period of exposure to far red light entirely returns the pigment to its initial state and prevents triggering of the developmental process. A thirty minute break between red and subsequent far red light exposure renders the red light effect irreversible, and development then occurs regardless of whether far red light exposure subsequently occurs.
2008-09-06 GO:0010161 red light signaling pathway Added DEFINITION The series of molecular signals initiated upon sensing of red light by a photoreceptor molecule. Red light is electromagnetic radiation of wavelength of 580-700nm. An example of this response is seen at the beginning of many plant species developmental stages. These include germination, and the point when cotyledon expansion is triggered. In certain species these processes take place in response to absorption of red light by the pigment molecule phytochrome, but the signal can be reversed by exposure to far red light. During the initial phase the phytochrome molecule is only present in the red light absorbing form, but on absorption of red light it changes to a far red light absorbing form, triggering progress through development. An immediate short period of exposure to far red light entirely returns the pigment to its initial state and prevents triggering of the developmental process. A thirty minute break between red and subsequent far red light exposure renders the red light effect irreversible, and development then occurs regardless of whether far red light exposure subsequently occurs.
2008-09-06 GO:0010201 response to continuous far red light stimulus by the high-irradiance response system Added DEFINITION A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of the detection of a continuous far red light stimulus by the high-irradiance response system. Far red light is electromagnetic radiation of wavelength 700-800nm. The activity of the high-irradiance response system is characterised by stronger effects of continuous than pulsed light at equal total fluence.
2008-09-06 GO:0010202 response to low fluence red light stimulus Added DEFINITION A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a low fluence red light stimulus. Red light is electromagnetic radiation of wavelength of 580-700nm. Low fluence red light is defined in this case as short pulses of red light followed by darkness, providing a light level of 0.001-0.1 mmol/m2/sec.
2008-09-06 GO:0010203 response to very low fluence red light stimulus Added DEFINITION A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a very low fluence red light stimulus. Red light is electromagnetic radiation of wavelength of 580-700nm. Very low fluence red light is defined in this case as short pulses of red light followed by darkness, providing light levels of less than 0.001 mmol/m2/sec.
2008-09-06 GO:0010218 response to far red light Added DEFINITION A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of far red light stimulus. Far red light is electromagnetic radiation of wavelength 700-800nm. An example of this response is seen at the beginning of many plant species developmental stages. These include germination, and the point when cotyledon expansion is triggered. In certain species these processes take place in response to absorption of red light by the pigment molecule phytochrome, but the signal can be reversed by exposure to far red light. During the initial phase the phytochrome molecule is only present in the red light absorbing form, but on absorption of red light it changes to a far red light absorbing form, triggering progress through development. An immediate short period of exposure to far red light entirely returns the pigment to its initial state and prevents triggering of the developmental process. A thirty minute break between red and subsequent far red light exposure renders the red light effect irreversible, and development then occurs regardless of whether far red light exposure subsequently occurs.
2008-09-06 GO:0010244 response to low fluence blue light stimulus by blue low-fluence system Added DEFINITION A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of the detection of a low fluence blue light stimulus by the blue low-fluence system. Blue light is electromagnetic radiation with a wavelength of between 440 and 500nm. The blue low-fluence system responds to blue light at or below 0.1 micromols/m2. In certain species excitation of the blue low fluence system induces the transcription of a number of nuclear and plastid coded genes.
2008-09-06 GO:0010687 site selection involved in cell cycle cytokinesis Added DEFINITION The process of marking the place where cytokinesis will occur in the context of cell cycle progression.
2008-09-06 GO:0055122 response to very low light intensity stimulus Added DEFINITION A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a very low light intensity stimulus. A very low light intensity stimulus is defined as a level of electromagnetic radiation below 0.001 mmol/m2/sec.
2008-09-06 GO:0032186 cellular bud neck septin ring organization Added RELATION part of GO:0010687 (site selection involved in cell cycle cytokinesis)
2008-09-06 GO:0032186 cellular bud neck septin ring organization Deleted RELATION part of GO:0033205 (cell cycle cytokinesis)
2008-09-06 GO:0032186 cellular bud neck septin ring organization Deleted RELATION part of GO:0007105 (cytokinesis, site selection)
2008-09-06 GO:0010687 site selection involved in cell cycle cytokinesis Added RELATION part of GO:0033205 (cell cycle cytokinesis)
2008-09-06 GO:0010687 site selection involved in cell cycle cytokinesis Added RELATION is a GO:0007105 (cytokinesis, site selection)
2008-09-06 GO:0014029 neural crest formation Deleted RELATION part of GO:0014032 (neural crest cell development)
2008-09-06 GO:0014034 neural crest cell fate commitment Added RELATION part of GO:0014029 (neural crest formation)
2008-09-06 GO:0014905 myoblast fusion involved in skeletal muscle regeneration Deleted RELATION part of GO:0014914 (myoblast maturation involved in muscle regeneration)
2008-09-06 GO:0006342 chromatin silencing Deleted RELATION is a GO:0031507 (heterochromatin assembly)
2008-09-06 GO:0006827 high-affinity iron ion transmembrane transport Added RELATION is a GO:0034755 (iron ion transmembrane transport)
2008-09-06 GO:0006827 high-affinity iron ion transmembrane transport Deleted RELATION is a GO:0034220 (ion transmembrane transport)
2008-09-06 GO:0010201 response to continuous far red light stimulus by the high-irradiance response system Added RELATION is a GO:0010218 (response to far red light)
2008-09-06 GO:0010201 response to continuous far red light stimulus by the high-irradiance response system Deleted RELATION is a GO:0009639 (response to red or far red light)
2008-09-06 GO:0010202 response to low fluence red light stimulus Added RELATION is a GO:0009645 (response to low light intensity stimulus)
2008-09-06 GO:0010203 response to very low fluence red light stimulus Added RELATION is a GO:0055122 (response to very low light intensity stimulus)
2008-09-06 GO:0010244 response to low fluence blue light stimulus by blue low-fluence system Added RELATION is a GO:0009645 (response to low light intensity stimulus)
2008-09-06 GO:0034756 regulation of iron ion transport Added SYNONYM regulation of iron transport
2008-09-06 GO:0034757 negative regulation of iron ion transport Added SYNONYM down regulation of iron ion transport
2008-09-06 GO:0034757 negative regulation of iron ion transport Added SYNONYM down-regulation of iron ion transport
2008-09-06 GO:0034757 negative regulation of iron ion transport Added SYNONYM downregulation of iron ion transport
2008-09-06 GO:0034757 negative regulation of iron ion transport Added SYNONYM inhibition of iron ion transport
2008-09-06 GO:0034757 negative regulation of iron ion transport Added SYNONYM negative regulation of iron transport
2008-09-06 GO:0034758 positive regulation of iron ion transport Added SYNONYM activation of iron ion transport
2008-09-06 GO:0034758 positive regulation of iron ion transport Added SYNONYM positive regulation of iron transport
2008-09-06 GO:0034758 positive regulation of iron ion transport Added SYNONYM stimulation of iron ion transport
2008-09-06 GO:0034758 positive regulation of iron ion transport Added SYNONYM up regulation of iron ion transport
2008-09-06 GO:0034758 positive regulation of iron ion transport Added SYNONYM up-regulation of iron ion transport
2008-09-06 GO:0034758 positive regulation of iron ion transport Added SYNONYM upregulation of iron ion transport
2008-09-06 GO:0034759 regulation of iron ion transmembrane transport Added SYNONYM regulation of transmembrane Fe transport
2008-09-06 GO:0034759 regulation of iron ion transmembrane transport Added SYNONYM regulation of transmembrane iron transport
2008-09-06 GO:0034760 negative regulation of iron ion transmembrane transport Added SYNONYM down regulation of transmembrane iron ion transport
2008-09-06 GO:0034760 negative regulation of iron ion transmembrane transport Added SYNONYM down-regulation of transmembrane iron ion transport
2008-09-06 GO:0034760 negative regulation of iron ion transmembrane transport Added SYNONYM downregulation of transmembrane iron ion transport
2008-09-06 GO:0034760 negative regulation of iron ion transmembrane transport Added SYNONYM inhibition of transmembrane iron ion transport
2008-09-06 GO:0034760 negative regulation of iron ion transmembrane transport Added SYNONYM negative regulation of transmembrane iron transport
2008-09-06 GO:0034761 positive regulation of iron ion transmembrane transport Added SYNONYM activation of transmembrane iron ion transport
2008-09-06 GO:0034761 positive regulation of iron ion transmembrane transport Added SYNONYM positive regulation of transmembrane iron transport
2008-09-06 GO:0034761 positive regulation of iron ion transmembrane transport Added SYNONYM stimulation of transmembrane iron ion transport
2008-09-06 GO:0034761 positive regulation of iron ion transmembrane transport Added SYNONYM up regulation of transmembrane iron ion transport
2008-09-06 GO:0034761 positive regulation of iron ion transmembrane transport Added SYNONYM up-regulation of transmembrane iron ion transport
2008-09-06 GO:0034761 positive regulation of iron ion transmembrane transport Added SYNONYM upregulation of transmembrane iron ion transport
2008-09-06 GO:0034763 negative regulation of transmembrane transport Added SYNONYM down regulation of transmembrane transport
2008-09-06 GO:0034763 negative regulation of transmembrane transport Added SYNONYM down-regulation of transmembrane transport
2008-09-06 GO:0000040 low-affinity iron ion transmembrane transport Added RELATION is a GO:0034755 (iron ion transmembrane transport)
2008-09-06 GO:0000040 low-affinity iron ion transmembrane transport Deleted RELATION is a GO:0034220 (ion transmembrane transport)
2008-09-06 GO:0055121 response to high fluence blue light stimulus by blue high-fluence system Added RELATION is a GO:0009644 (response to high light intensity)
2008-09-06 GO:0055121 response to high fluence blue light stimulus by blue high-fluence system Added RELATION is a GO:0009637 (response to blue light)
2008-09-06 GO:0055122 response to very low light intensity stimulus Added RELATION is a GO:0009642 (response to light intensity)
2008-09-06 GO:0034761 positive regulation of iron ion transmembrane transport Added RELATION is a GO:0034758 (positive regulation of iron ion transport)
2008-09-06 GO:0034761 positive regulation of iron ion transmembrane transport Added RELATION positively regulates GO:0034755 (iron ion transmembrane transport)
2008-09-06 GO:0034762 regulation of transmembrane transport Added RELATION regulates GO:0055085 (transmembrane transport)
2008-09-06 GO:0034762 regulation of transmembrane transport Added RELATION is a GO:0051049 (regulation of transport)
2008-09-06 GO:0034763 negative regulation of transmembrane transport Added RELATION negatively regulates GO:0055085 (transmembrane transport)
2008-09-06 GO:0034763 negative regulation of transmembrane transport Added RELATION is a GO:0034762 (regulation of transmembrane transport)
2008-09-06 GO:0034764 positive regulation of transmembrane transport Added RELATION positively regulates GO:0055085 (transmembrane transport)
2008-09-06 GO:0034764 positive regulation of transmembrane transport Added RELATION is a GO:0034762 (regulation of transmembrane transport)
2008-09-06 GO:0034765 regulation of ion transmembrane transport Added RELATION is a GO:0034762 (regulation of transmembrane transport)
2008-09-06 GO:0034765 regulation of ion transmembrane transport Added RELATION regulates GO:0034220 (ion transmembrane transport)
2008-09-06 GO:0034766 negative regulation of ion transmembrane transport Added RELATION is a GO:0034765 (regulation of ion transmembrane transport)
2008-09-06 GO:0034766 negative regulation of ion transmembrane transport Added RELATION negatively regulates GO:0034220 (ion transmembrane transport)
2008-09-06 GO:0034767 positive regulation of ion transmembrane transport Added RELATION is a GO:0034765 (regulation of ion transmembrane transport)
2008-09-06 GO:0034767 positive regulation of ion transmembrane transport Added RELATION positively regulates GO:0034755 (iron ion transmembrane transport)
2008-09-06 GO:0034754 cellular hormone metabolic process Added RELATION is a GO:0044237 (cellular metabolic process)
2008-09-06 GO:0034754 cellular hormone metabolic process Added RELATION is a GO:0042445 (hormone metabolic process)
2008-09-06 GO:0034755 iron ion transmembrane transport Added RELATION is a GO:0034220 (ion transmembrane transport)
2008-09-06 GO:0034755 iron ion transmembrane transport Added RELATION is a GO:0006826 (iron ion transport)
2008-09-06 GO:0034756 regulation of iron ion transport Added RELATION is a GO:0043269 (regulation of ion transport)
2008-09-06 GO:0042445 hormone metabolic process Added RELATION is a GO:0008152 (metabolic process)
2008-09-06 GO:0042445 hormone metabolic process Deleted RELATION is a GO:0044237 (cellular metabolic process)
2008-09-06 GO:0034756 regulation of iron ion transport Added RELATION regulates GO:0006826 (iron ion transport)
2008-09-06 GO:0034757 negative regulation of iron ion transport Added RELATION is a GO:0043271 (negative regulation of ion transport)
2008-09-06 GO:0034757 negative regulation of iron ion transport Added RELATION is a GO:0034756 (regulation of iron ion transport)
2008-09-06 GO:0034757 negative regulation of iron ion transport Added RELATION negatively regulates GO:0006826 (iron ion transport)
2008-09-06 GO:0034758 positive regulation of iron ion transport Added RELATION is a GO:0043270 (positive regulation of ion transport)
2008-09-06 GO:0034758 positive regulation of iron ion transport Added RELATION is a GO:0034756 (regulation of iron ion transport)
2008-09-06 GO:0034758 positive regulation of iron ion transport Added RELATION positively regulates GO:0006826 (iron ion transport)
2008-09-06 GO:0034759 regulation of iron ion transmembrane transport Added RELATION is a GO:0034756 (regulation of iron ion transport)
2008-09-06 GO:0034759 regulation of iron ion transmembrane transport Added RELATION regulates GO:0034755 (iron ion transmembrane transport)
2008-09-06 GO:0034760 negative regulation of iron ion transmembrane transport Added RELATION is a GO:0034757 (negative regulation of iron ion transport)
2008-09-06 GO:0034760 negative regulation of iron ion transmembrane transport Added RELATION negatively regulates GO:0034755 (iron ion transmembrane transport)
2008-09-06 GO:0019988 charged-tRNA amino acid modification Added RELATION is a GO:0006464 (cellular protein modification process)
2008-09-06 GO:0019988 charged-tRNA amino acid modification Deleted RELATION part of GO:0006464 (cellular protein modification process)
2008-09-06 GO:0019988 charged-tRNA amino acid modification Deleted RELATION part of GO:0006412 (translation)

Terms

Timestamp GO ID GO Term Name Action Category Detail
2008-09-06 GO:0034757 negative regulation of iron ion transport Added TERM negative regulation of iron ion transport
2008-09-06 GO:0034758 positive regulation of iron ion transport Added TERM positive regulation of iron ion transport
2008-09-06 GO:0034759 regulation of iron ion transmembrane transport Added TERM regulation of transmembrane iron ion transport
2008-09-06 GO:0034760 negative regulation of iron ion transmembrane transport Added TERM negative regulation of transmembrane iron ion transport
2008-09-06 GO:0034761 positive regulation of iron ion transmembrane transport Added TERM positive regulation of transmembrane iron ion transport
2008-09-06 GO:0034762 regulation of transmembrane transport Added TERM regulation of transmembrane transport
2008-09-06 GO:0034763 negative regulation of transmembrane transport Added TERM negative regulation of transmembrane transport
2008-09-06 GO:0034764 positive regulation of transmembrane transport Added TERM positive regulation of transmembrane transport
2008-09-06 GO:0034765 regulation of ion transmembrane transport Added TERM regulation of transmembrane ion transport
2008-09-06 GO:0034766 negative regulation of ion transmembrane transport Added TERM negative regulation of transmembrane ion transport
2008-09-06 GO:0034767 positive regulation of ion transmembrane transport Added TERM positive regulation of transmembrane ion transport
2008-09-06 GO:0042180 cellular ketone metabolic process Updated TERM cellular ketone metabolic process
2008-09-06 GO:0043446 cellular alkane metabolic process Updated TERM cellular alkane metabolic process
2008-09-06 GO:0043449 cellular alkene metabolic process Updated TERM cellular alkene metabolic process
2008-09-06 GO:0043452 cellular alkyne metabolic process Updated TERM cellular alkyne metabolic process
2008-09-06 GO:0043603 cellular amide metabolic process Updated TERM cellular amide metabolic process
2008-09-06 GO:0043094 cellular metabolic compound salvage Updated TERM cellular metabolic compound salvage
2008-09-06 GO:0055121 response to high fluence blue light stimulus by blue high-fluence system Added TERM response to high fluence blue light stimulus by blue high-fluence system
2008-09-06 GO:0055122 response to very low light intensity stimulus Added TERM response to very low light intensity stimulus
2008-09-06 GO:0046950 cellular ketone body metabolic process Updated TERM cellular ketone body metabolic process
2008-09-06 GO:0006066 alcohol metabolic process Updated TERM cellular alcohol metabolic process
2008-09-06 GO:0006081 cellular aldehyde metabolic process Updated TERM cellular aldehyde metabolic process
2008-09-06 GO:0006519 cellular amino acid and derivative metabolic process Updated TERM cellular amino acid and derivative metabolic process
2008-09-06 GO:0006725 cellular aromatic compound metabolic process Updated TERM cellular aromatic compound metabolic process
2008-09-06 GO:0009645 response to low light intensity stimulus Updated TERM response to low light intensity stimulus
2008-09-06 GO:0010201 response to continuous far red light stimulus by the high-irradiance response system Updated TERM response to continuous far red light stimulus by the high-irradiance response system
2008-09-06 GO:0010202 response to low fluence red light stimulus Updated TERM response to low fluence red light stimulus
2008-09-06 GO:0010203 response to very low fluence red light stimulus Updated TERM response to very low fluence red light stimulus
2008-09-06 GO:0010244 response to low fluence blue light stimulus by blue low-fluence system Updated TERM response to low fluence blue light stimulus by blue low-fluence system
2008-09-06 GO:0009308 amine metabolic process Updated TERM cellular amine metabolic process
2008-09-06 GO:0010687 site selection involved in cell cycle cytokinesis Added TERM cytokinesis during cell cycle, site selection
2008-09-06 GO:0030719 P granule organization Updated TERM P granule organization and biogenesis
2008-09-06 GO:0034754 cellular hormone metabolic process Added TERM cellular hormone metabolic process
2008-09-06 GO:0034755 iron ion transmembrane transport Added TERM transmembrane iron ion transport
2008-09-06 GO:0034756 regulation of iron ion transport Added TERM regulation of iron ion transport

Definition/synonyms

Timestamp GO ID GO Term Name Action Category Detail
2008-09-06 GO:0010203 response to very low fluence red light stimulus Deleted DEFINITION A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a very low fluence red light stimulus. Very low fluence red light is short pulses of very low fluence light followed by darkness, which occurs at light levels of less than 0.001 mmol/m2/sec red light and is not far-red reversible.
2008-09-06 GO:0016513 core-binding factor complex Deleted DEFINITION A heterodimeric transcription factor complex that contains an alpha subunit (Runx1, Runx2 or Runx3 in human) that binds DNA and a non-DNA-binding beta subunit (CBFbeta), and binds to a consensus sequence 5'-YGYGGTY-3' found in several enhancers and promoters; the beta subunit enhances the DNA binding of the alpha subunit.
2008-09-06 GO:0005882 intermediate filament Deleted DEFINITION A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filamentss; and Type V, lamins.
2008-09-06 GO:0031389 Rad17 RFC-like complex Deleted DEFINITION A pentameric protein complex related to replication factor C, which loads a trimeric complex of checkpoint proteins (known as the checkpoint clamp or 9-1-1 complex) onto DNA at damage sites; functions in DNA damage cell cycle checkpoints. In Schizosaccharomyces pombe the subunits are known as Rad17, Rfc2, Rfc3, Rfc4, and Rfc5, while in Saccharomyces cerevisiae the subunits are known as Rad24p, Rfc2p, Rfc3p, Rfc4p, and Rfc5p.
2008-09-06 GO:0043186 P granule Deleted DEFINITION A small protein and RNA containing electron dense organelle, not surrounded by a membrane, that is associated with germ nuclei in the nematode gonad and localized to germ cells and their precursors throughout development.
2008-09-06 GO:0005882 intermediate filament Added DEFINITION A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filamentss; and Type V, lamins.
2008-09-06 GO:0006066 alcohol metabolic process Added DEFINITION The chemical reactions and pathways involving alcohols, any of a class of compounds containing one or more hydroxyl groups attached to a saturated carbon atom, as carried out by individual cells.
2008-09-06 GO:0006081 cellular aldehyde metabolic process Added DEFINITION The chemical reactions and pathways involving aldehydes, any organic compound with the formula R-CH=O, as carried out by individual cells.
2008-09-06 GO:0006519 cellular amino acid and derivative metabolic process Added DEFINITION The chemical reactions and pathways involving amino acids, organic acids containing one or more amino substituents, and compounds derived from amino acids, as carried out by individual cells.
2008-09-06 GO:0006725 cellular aromatic compound metabolic process Added DEFINITION The chemical reactions and pathways involving aromatic compounds, any organic compound characterized by one or more planar rings, each of which contains conjugated double bonds and delocalized pi electrons, as carried out by individual cells.
2008-09-06 GO:0009308 amine metabolic process Added DEFINITION The chemical reactions and pathways involving any organic compound that is weakly basic in character and contains an amino or a substituted amino group, as carried out by individual cells. Amines are called primary, secondary, or tertiary according to whether one, two, or three carbon atoms are attached to the nitrogen atom.
2008-09-06 GO:0009637 response to blue light Added DEFINITION A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a blue light stimulus. Blue light is electromagnetic radiation with a wavelength of between 440 and 500nm.
2008-09-06 GO:0009645 response to low light intensity stimulus Added DEFINITION A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a low light intensity stimulus. Low light intensity is defined as a level of electromagnetic radiation at or below 0.1 micromols/m2.
2008-09-06 GO:0009906 response to photoperiod, blue light Added DEFINITION A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of the detection of a blue light photoperiod stimulus. Blue light is electromagnetic radiation with a wavelength of between 440 and 500nm.
2008-09-06 GO:0009907 response to photoperiod, red light Added DEFINITION A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a red light photoperiod stimulus. Red light is electromagnetic radiation of wavelength of 580-700nm.
2008-09-06 GO:0010017 red or far-red light signaling pathway Added DEFINITION The series of molecular signals initiated upon sensing by photoreceptor molecules of red light or far red light. Red light is electromagnetic radiation of wavelength of 580-700nm. Far red light is electromagnetic radiation of wavelength 700-800nm. An example of this response is seen at the beginning of many plant species developmental stages. These include germination, and the point when cotyledon expansion is triggered. In certain species these processes take place in response to absorption of red light by the pigment molecule phytochrome, but the signal can be reversed by exposure to far red light. During the initial phase the phytochrome molecule is only present in the red light absorbing form, but on absorption of red light it changes to a far red light absorbing form, triggering progress through development. An immediate short period of exposure to far red light entirely returns the pigment to its initial state and prevents triggering of the developmental process. A thirty minute break between red and subsequent far red light exposure renders the red light effect irreversible, and development then occurs regardless of whether far red light exposure subsequently occurs.
2008-09-06 GO:0009639 response to red or far red light Added DEFINITION A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a red or far red light stimulus. Red light is electromagnetic radiation of wavelength of 580-700nm. Far red light is electromagnetic radiation of wavelength 700-800nm. An example of this response is seen at the beginning of many plant species developmental stages. These include germination, and the point when cotyledon expansion is triggered. In certain species these processes take place in response to absorption of red light by the pigment molecule phytochrome, but the signal can be reversed by exposure to far red light. During the initial phase the phytochrome molecule is only present in the red light absorbing form, but on absorption of red light it changes to a far red light absorbing form, triggering progress through development. An immediate short period of exposure to far red light entirely returns the pigment to its initial state and prevents triggering of the developmental process. A thirty minute break between red and subsequent far red light exposure renders the red light effect irreversible, and development then occurs regardless of whether far red light exposure subsequently occurs.
2008-09-06 GO:0010114 response to red light Added DEFINITION A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a red light stimulus. Red light is electromagnetic radiation of wavelength of 580-700nm. An example of this response is seen at the beginning of many plant species developmental stages. These include germination, and the point when cotyledon expansion is triggered. In certain species these processes take place in response to absorption of red light by the pigment molecule phytochrome, but the signal can be reversed by exposure to far red light. During the initial phase the phytochrome molecule is only present in the red light absorbing form, but on absorption of red light it changes to a far red light absorbing form, triggering progress through development. An immediate short period of exposure to far red light entirely returns the pigment to its initial state and prevents triggering of the developmental process. A thirty minute break between red and subsequent far red light exposure renders the red light effect irreversible, and development then occurs regardless of whether far red light exposure subsequently occurs.
2008-09-06 GO:0016513 core-binding factor complex Added DEFINITION A heterodimeric transcription factor complex that contains an alpha subunit (Runx1, Runx2 or Runx3 in human) that binds DNA and a non-DNA-binding beta subunit (CBFbeta), and binds to a consensus sequence 5'-YGYGGTY-3' found in several enhancers and promoters; the beta subunit enhances the DNA binding of the alpha subunit.
2008-09-06 GO:0031389 Rad17 RFC-like complex Added DEFINITION A pentameric protein complex related to replication factor C, which loads a trimeric complex of checkpoint proteins (known as the checkpoint clamp or 9-1-1 complex) onto DNA at damage sites; functions in DNA damage cell cycle checkpoints. In Schizosaccharomyces pombe the subunits are known as Rad17, Rfc2, Rfc3, Rfc4, and Rfc5, while in Saccharomyces cerevisiae the subunits are known as Rad24p, Rfc2p, Rfc3p, Rfc4p, and Rfc5p.
2008-09-06 GO:0034754 cellular hormone metabolic process Added DEFINITION The chemical reactions and pathways involving any hormone, naturally occurring substances secreted by specialized cells that affects the metabolism or behavior of other cells possessing functional receptors for the hormone, as carried out by individual cells.
2008-09-06 GO:0034755 iron ion transmembrane transport Added DEFINITION A process whereby an iron ion is transported from one side of a membrane to the other.
2008-09-06 GO:0034756 regulation of iron ion transport Added DEFINITION Any process that modulates the frequency, rate or extent of the directed movement of iron ions (Fe) into, out of, within or between cells.
2008-09-06 GO:0034757 negative regulation of iron ion transport Added DEFINITION Any process that stops, prevents or reduces the frequency, rate or extent of the directed movement of iron ions into, out of, within or between cells.
2008-09-06 GO:0034758 positive regulation of iron ion transport Added DEFINITION Any process that activates or increases the frequency, rate or extent of the directed movement of iron ions into, out of, within or between cells.
2008-09-06 GO:0034759 regulation of iron ion transmembrane transport Added DEFINITION Any process that modulates the frequency, rate or extent of the directed movement of iron ions (Fe) from one side of a membrane to the other.
2008-09-06 GO:0043094 cellular metabolic compound salvage Deleted DEFINITION Any process which produces a useful metabolic compound from derivatives of it without de novo synthesis.
2008-09-06 GO:0046950 cellular ketone body metabolic process Deleted DEFINITION The chemical reactions and pathways involving ketone bodies, any one of the three substances: acetoacetate, D-3-hydroxybutyrate (beta-hydroxybutyrate) or acetone. Although 3-hydroxybutyrate is not a ketone, it is classed as a ketone body because it exists in an equilibrium with acetoacetate. Ketone bodies may accumulate in excessive amounts in the body in starvation, diabetes mellitus or in other defects of carbohydrate metabolism.
2008-09-06 GO:0042180 cellular ketone metabolic process Deleted DEFINITION The chemical reactions and pathways involving any of a class of organic compounds that contain the carbonyl group, CO, and in which the carbonyl group is bonded only to carbon atoms. The general formula for a ketone is RCOR, where R and R are alkyl or aryl groups.
2008-09-06 GO:0010018 far-red light signaling pathway Deleted DEFINITION The series of molecular signals initiated upon sensing of far red light by photoreceptor molecule at 730 nm.
2008-09-06 GO:0006066 alcohol metabolic process Deleted DEFINITION The chemical reactions and pathways involving alcohols, any of a class of compounds containing one or more hydroxyl groups attached to a saturated carbon atom.
2008-09-06 GO:0006081 cellular aldehyde metabolic process Deleted DEFINITION The chemical reactions and pathways involving aldehydes, any organic compound with the formula R-CH=O.
2008-09-06 GO:0043446 cellular alkane metabolic process Deleted DEFINITION The chemical reactions and pathways involving an alkane, any saturated hydrocarbon without cycles.
2008-09-06 GO:0043449 cellular alkene metabolic process Deleted DEFINITION The chemical reactions and pathways involving an alkene, unsaturated hydrocarbons containing at least one carbon-carbon double bond.
2008-09-06 GO:0043452 cellular alkyne metabolic process Deleted DEFINITION The chemical reactions and pathways involving an alkyne, any hydrocarbon that has at least one triple bond between two carbon atoms.
2008-09-06 GO:0006725 cellular aromatic compound metabolic process Deleted DEFINITION The chemical reactions and pathways involving aromatic compounds, any organic compound characterized by one or more planar rings, each of which contains conjugated double bonds and delocalized pi electrons.
2008-09-06 GO:0043603 cellular amide metabolic process Deleted DEFINITION The chemical reactions and pathways involving an amide, any derivative of an oxoacid in which an acidic hydroxy group has been replaced by an amino or substituted amino group.
2008-09-06 GO:0009308 amine metabolic process Deleted DEFINITION The chemical reactions and pathways involving any organic compound that is weakly basic in character and contains an amino or a substituted amino group. Amines are called primary, secondary, or tertiary according to whether one, two, or three carbon atoms are attached to the nitrogen atom.
2008-09-06 GO:0006519 cellular amino acid and derivative metabolic process Deleted DEFINITION The chemical reactions and pathways involving amino acids, organic acids containing one or more amino substituents, and compounds derived from amino acids.
2008-09-06 GO:0035194 posttranscriptional gene silencing by RNA Deleted DEFINITION Any process of gene inactivation (silencing) in which small RNAs trigger degradation of mRNA.
2008-09-06 GO:0010161 red light signaling pathway Deleted DEFINITION The series of molecular signals initiated upon sensing of red light by photoreceptor molecule at 660 nm.
2008-09-06 GO:0010017 red or far-red light signaling pathway Deleted DEFINITION The series of molecular signals initiated upon sensing by photoreceptor molecules of red light at 660nm or far red light at 730nm.
2008-09-06 GO:0009637 response to blue light Deleted DEFINITION A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a blue light stimulus. Blue light has a wavelength of between 440 and 500nm.
2008-09-06 GO:0010218 response to far red light Deleted DEFINITION A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a far red light stimulus. Far red light has a wavelength of around 740nm.
2008-09-06 GO:0010201 response to continuous far red light stimulus by the high-irradiance response system Deleted DEFINITION A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a high irradiance stimulus, continuous exposure to low levels of far-red light for a prolonged period of time and is not far-red reversible.
2008-09-06 GO:0010244 response to low fluence blue light stimulus by blue low-fluence system Deleted DEFINITION A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a low fluence blue light stimulus. Low fluence blue light is blue light (threshold 0.1 mmol/m2/sec); excitation of the Blue Low Fluence (BLF)-System induces the transcription of a number of nuclear and plastid coded genes.
2008-09-06 GO:0010202 response to low fluence red light stimulus Deleted DEFINITION A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a low fluence red light stimulus. Low fluence red light is red light pulses followed by darkness, which occurs at red light levels of 0.001-0.1 mmol/m2/sec and is red/far-red reversible.
2008-09-06 GO:0009645 response to low light intensity stimulus Deleted DEFINITION A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a low light intensity stimulus.
2008-09-06 GO:0009906 response to photoperiod, blue light Deleted DEFINITION A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a blue light (light with a wavelength of between 440 and 500nm) photoperiod stimulus.
2008-09-06 GO:0009907 response to photoperiod, red light Deleted DEFINITION A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a red light (light with a wavelength of between 620 and 700nm) photoperiod stimulus.
2008-09-06 GO:0009639 response to red or far red light Deleted DEFINITION A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a red or far red light stimulus. Red and far red light is that with a wavelength of above 620nm.
2008-09-06 GO:0010114 response to red light Deleted DEFINITION A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a red light stimulus. Red light has a wavelength of between 620 and 700nm.
2008-09-06 GO:0034763 negative regulation of transmembrane transport Added SYNONYM downregulation of transmembrane transport
2008-09-06 GO:0034763 negative regulation of transmembrane transport Added SYNONYM inhibition of transmembrane transport
2008-09-06 GO:0034764 positive regulation of transmembrane transport Added SYNONYM activation of transmembrane transport
2008-09-06 GO:0034764 positive regulation of transmembrane transport Added SYNONYM positive regulation of transmembrane transport
2008-09-06 GO:0034764 positive regulation of transmembrane transport Added SYNONYM stimulation of transmembrane transport
2008-09-06 GO:0034764 positive regulation of transmembrane transport Added SYNONYM up regulation of transmembrane transport
2008-09-06 GO:0034764 positive regulation of transmembrane transport Added SYNONYM up-regulation of transmembrane transport
2008-09-06 GO:0034764 positive regulation of transmembrane transport Added SYNONYM upregulation of transmembrane transport
2008-09-06 GO:0034766 negative regulation of ion transmembrane transport Added SYNONYM down regulation of transmembrane ion transport
2008-09-06 GO:0034766 negative regulation of ion transmembrane transport Added SYNONYM down-regulation of transmembrane ion transport
2008-09-06 GO:0034766 negative regulation of ion transmembrane transport Added SYNONYM downregulation of transmembrane ion transport
2008-09-06 GO:0034766 negative regulation of ion transmembrane transport Added SYNONYM inhibition of transmembrane ion transport
2008-09-06 GO:0034767 positive regulation of ion transmembrane transport Added SYNONYM activation of transmembrane ion transport
2008-09-06 GO:0034767 positive regulation of ion transmembrane transport Added SYNONYM positive regulation of transmembrane transport
2008-09-06 GO:0034767 positive regulation of ion transmembrane transport Added SYNONYM stimulation of transmembrane ion transport
2008-09-06 GO:0034767 positive regulation of ion transmembrane transport Added SYNONYM up regulation of transmembrane ion transport
2008-09-06 GO:0034767 positive regulation of ion transmembrane transport Added SYNONYM up-regulation of transmembrane ion transport
2008-09-06 GO:0034767 positive regulation of ion transmembrane transport Added SYNONYM upregulation of transmembrane ion transport
2008-09-06 GO:0043110 rDNA spacer replication fork barrier binding Added SYNONYM RTS1 barrier binding
2008-09-06 GO:0043110 rDNA spacer replication fork barrier binding Added SYNONYM RTS1 element binding
2008-09-06 GO:0055121 response to high fluence blue light stimulus by blue high-fluence system Added SYNONYM response to high fluence blue light
2008-09-06 GO:0055121 response to high fluence blue light stimulus by blue high-fluence system Added SYNONYM response to high fluence blue light by bhf system
2008-09-06 GO:0010244 response to low fluence blue light stimulus by blue low-fluence system Added SYNONYM response to low fluence blue light
2008-09-06 GO:0010244 response to low fluence blue light stimulus by blue low-fluence system Added SYNONYM response to low fluence blue light by blf system
2008-09-06 GO:0030719 P granule organization Added SYNONYM polar granule organization and biogenesis
2008-09-06 GO:0034755 iron ion transmembrane transport Added SYNONYM transmembrane iron transport
2008-09-06 GO:0034756 regulation of iron ion transport Added SYNONYM regulation of Fe transport
2008-09-06 GO:0034760 negative regulation of iron ion transmembrane transport Added DEFINITION Any process that stops, prevents or reduces the frequency, rate or extent of the directed movement of iron ions from one side of a membrane to the other.
2008-09-06 GO:0034761 positive regulation of iron ion transmembrane transport Added DEFINITION Any process that activates or increases the frequency, rate or extent of the directed movement of iron ions from one side of a membrane to the other.
2008-09-06 GO:0034762 regulation of transmembrane transport Added DEFINITION Any process that modulates the frequency, rate or extent of the directed movement of a solute from one side of a membrane to the other.
2008-09-06 GO:0034763 negative regulation of transmembrane transport Added DEFINITION Any process that stops, prevents or reduces the frequency, rate or extent of the directed movement of a solute from one side of a membrane to the other.
2008-09-06 GO:0034764 positive regulation of transmembrane transport Added DEFINITION Any process that activates or increases the frequency, rate or extent of the directed movement of a solute from one side of a membrane to the other.
2008-09-06 GO:0034765 regulation of ion transmembrane transport Added DEFINITION Any process that modulates the frequency, rate or extent of the directed movement of ions from one side of a membrane to the other.
2008-09-06 GO:0034766 negative regulation of ion transmembrane transport Added DEFINITION Any process that stops, prevents or reduces the frequency, rate or extent of the directed movement of ions from one side of a membrane to the other.
2008-09-06 GO:0034767 positive regulation of ion transmembrane transport Added DEFINITION Any process that activates or increases the frequency, rate or extent of the directed movement of ions from one side of a membrane to the other.
2008-09-06 GO:0035194 posttranscriptional gene silencing by RNA Added DEFINITION Any process of posttranscriptional gene inactivation (silencing) mediated by small RNA molecules that may trigger mRNA degradation or negatively regulate translation.
2008-09-06 GO:0042180 cellular ketone metabolic process Added DEFINITION The chemical reactions and pathways involving any of a class of organic compounds that contain the carbonyl group, CO, and in which the carbonyl group is bonded only to carbon atoms, as carried out by individual cells. The general formula for a ketone is RCOR, where R and R are alkyl or aryl groups.
2008-09-06 GO:0043094 cellular metabolic compound salvage Added DEFINITION Any process which produces a useful metabolic compound from derivatives of it without de novo synthesis, as carried out by individual cells.
2008-09-06 GO:0043186 P granule Added DEFINITION A small cytoplasmic, non-membranous RNA/protein complex aggregates in the primordial germ cells of many higher eukaryotes.
2008-09-06 GO:0043446 cellular alkane metabolic process Added DEFINITION The chemical reactions and pathways involving an alkane, any saturated hydrocarbon without cycles, as carried out by individual cells.
2008-09-06 GO:0043449 cellular alkene metabolic process Added DEFINITION The chemical reactions and pathways involving an alkene, unsaturated hydrocarbons containing at least one carbon-carbon double bond, as carried out by individual cells.
2008-09-06 GO:0043452 cellular alkyne metabolic process Added DEFINITION The chemical reactions and pathways involving an alkyne, any hydrocarbon that has at least one triple bond between two carbon atoms, as carried out by individual cells.
2008-09-06 GO:0043603 cellular amide metabolic process Added DEFINITION The chemical reactions and pathways involving an amide, any derivative of an oxoacid in which an acidic hydroxy group has been replaced by an amino or substituted amino group, as carried out by individual cells.
2008-09-06 GO:0046950 cellular ketone body metabolic process Added DEFINITION The chemical reactions and pathways involving ketone bodies, any one of the three substances: acetoacetate, D-3-hydroxybutyrate (beta-hydroxybutyrate) or acetone, as carried out by individual cells. Although 3-hydroxybutyrate is not a ketone, it is classed as a ketone body because it exists in an equilibrium with acetoacetate. Ketone bodies may accumulate in excessive amounts in the body in starvation, diabetes mellitus or in other defects of carbohydrate metabolism.
2008-09-06 GO:0055121 response to high fluence blue light stimulus by blue high-fluence system Added DEFINITION A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of the detection of a high fluence blue light stimulus by the blue high-fluence system. Blue light is electromagnetic radiation with a wavelength of between 440 and 500nm. The blue high-fluence system responds to blue light at levels between 100 and 1000 micromols/m2.
2008-09-06 GO:0010018 far-red light signaling pathway Added DEFINITION The series of molecular signals initiated upon sensing of far red light by a photoreceptor molecule. Far red light is electromagnetic radiation of wavelength 700-800nm. An example of this response is seen at the beginning of many plant species developmental stages. These include germination, and the point when cotyledon expansion is triggered. In certain species these processes take place in response to absorption of red light by the pigment molecule phytochrome, but the signal can be reversed by exposure to far red light. During the initial phase the phytochrome molecule is only present in the red light absorbing form, but on absorption of red light it changes to a far red light absorbing form, triggering progress through development. An immediate short period of exposure to far red light entirely returns the pigment to its initial state and prevents triggering of the developmental process. A thirty minute break between red and subsequent far red light exposure renders the red light effect irreversible, and development then occurs regardless of whether far red light exposure subsequently occurs.
2008-09-06 GO:0010161 red light signaling pathway Added DEFINITION The series of molecular signals initiated upon sensing of red light by a photoreceptor molecule. Red light is electromagnetic radiation of wavelength of 580-700nm. An example of this response is seen at the beginning of many plant species developmental stages. These include germination, and the point when cotyledon expansion is triggered. In certain species these processes take place in response to absorption of red light by the pigment molecule phytochrome, but the signal can be reversed by exposure to far red light. During the initial phase the phytochrome molecule is only present in the red light absorbing form, but on absorption of red light it changes to a far red light absorbing form, triggering progress through development. An immediate short period of exposure to far red light entirely returns the pigment to its initial state and prevents triggering of the developmental process. A thirty minute break between red and subsequent far red light exposure renders the red light effect irreversible, and development then occurs regardless of whether far red light exposure subsequently occurs.
2008-09-06 GO:0010201 response to continuous far red light stimulus by the high-irradiance response system Added DEFINITION A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of the detection of a continuous far red light stimulus by the high-irradiance response system. Far red light is electromagnetic radiation of wavelength 700-800nm. The activity of the high-irradiance response system is characterised by stronger effects of continuous than pulsed light at equal total fluence.
2008-09-06 GO:0010202 response to low fluence red light stimulus Added DEFINITION A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a low fluence red light stimulus. Red light is electromagnetic radiation of wavelength of 580-700nm. Low fluence red light is defined in this case as short pulses of red light followed by darkness, providing a light level of 0.001-0.1 mmol/m2/sec.
2008-09-06 GO:0010203 response to very low fluence red light stimulus Added DEFINITION A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a very low fluence red light stimulus. Red light is electromagnetic radiation of wavelength of 580-700nm. Very low fluence red light is defined in this case as short pulses of red light followed by darkness, providing light levels of less than 0.001 mmol/m2/sec.
2008-09-06 GO:0010218 response to far red light Added DEFINITION A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of far red light stimulus. Far red light is electromagnetic radiation of wavelength 700-800nm. An example of this response is seen at the beginning of many plant species developmental stages. These include germination, and the point when cotyledon expansion is triggered. In certain species these processes take place in response to absorption of red light by the pigment molecule phytochrome, but the signal can be reversed by exposure to far red light. During the initial phase the phytochrome molecule is only present in the red light absorbing form, but on absorption of red light it changes to a far red light absorbing form, triggering progress through development. An immediate short period of exposure to far red light entirely returns the pigment to its initial state and prevents triggering of the developmental process. A thirty minute break between red and subsequent far red light exposure renders the red light effect irreversible, and development then occurs regardless of whether far red light exposure subsequently occurs.
2008-09-06 GO:0010244 response to low fluence blue light stimulus by blue low-fluence system Added DEFINITION A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of the detection of a low fluence blue light stimulus by the blue low-fluence system. Blue light is electromagnetic radiation with a wavelength of between 440 and 500nm. The blue low-fluence system responds to blue light at or below 0.1 micromols/m2. In certain species excitation of the blue low fluence system induces the transcription of a number of nuclear and plastid coded genes.
2008-09-06 GO:0010687 site selection involved in cell cycle cytokinesis Added DEFINITION The process of marking the place where cytokinesis will occur in the context of cell cycle progression.
2008-09-06 GO:0055122 response to very low light intensity stimulus Added DEFINITION A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a very low light intensity stimulus. A very low light intensity stimulus is defined as a level of electromagnetic radiation below 0.001 mmol/m2/sec.
2008-09-06 GO:0034756 regulation of iron ion transport Added SYNONYM regulation of iron transport
2008-09-06 GO:0034757 negative regulation of iron ion transport Added SYNONYM down regulation of iron ion transport
2008-09-06 GO:0034757 negative regulation of iron ion transport Added SYNONYM down-regulation of iron ion transport
2008-09-06 GO:0034757 negative regulation of iron ion transport Added SYNONYM downregulation of iron ion transport
2008-09-06 GO:0034757 negative regulation of iron ion transport Added SYNONYM inhibition of iron ion transport
2008-09-06 GO:0034757 negative regulation of iron ion transport Added SYNONYM negative regulation of iron transport
2008-09-06 GO:0034758 positive regulation of iron ion transport Added SYNONYM activation of iron ion transport
2008-09-06 GO:0034758 positive regulation of iron ion transport Added SYNONYM positive regulation of iron transport
2008-09-06 GO:0034758 positive regulation of iron ion transport Added SYNONYM stimulation of iron ion transport
2008-09-06 GO:0034758 positive regulation of iron ion transport Added SYNONYM up regulation of iron ion transport
2008-09-06 GO:0034758 positive regulation of iron ion transport Added SYNONYM up-regulation of iron ion transport
2008-09-06 GO:0034758 positive regulation of iron ion transport Added SYNONYM upregulation of iron ion transport
2008-09-06 GO:0034759 regulation of iron ion transmembrane transport Added SYNONYM regulation of transmembrane Fe transport
2008-09-06 GO:0034759 regulation of iron ion transmembrane transport Added SYNONYM regulation of transmembrane iron transport
2008-09-06 GO:0034760 negative regulation of iron ion transmembrane transport Added SYNONYM down regulation of transmembrane iron ion transport
2008-09-06 GO:0034760 negative regulation of iron ion transmembrane transport Added SYNONYM down-regulation of transmembrane iron ion transport
2008-09-06 GO:0034760 negative regulation of iron ion transmembrane transport Added SYNONYM downregulation of transmembrane iron ion transport
2008-09-06 GO:0034760 negative regulation of iron ion transmembrane transport Added SYNONYM inhibition of transmembrane iron ion transport
2008-09-06 GO:0034760 negative regulation of iron ion transmembrane transport Added SYNONYM negative regulation of transmembrane iron transport
2008-09-06 GO:0034761 positive regulation of iron ion transmembrane transport Added SYNONYM activation of transmembrane iron ion transport
2008-09-06 GO:0034761 positive regulation of iron ion transmembrane transport Added SYNONYM positive regulation of transmembrane iron transport
2008-09-06 GO:0034761 positive regulation of iron ion transmembrane transport Added SYNONYM stimulation of transmembrane iron ion transport
2008-09-06 GO:0034761 positive regulation of iron ion transmembrane transport Added SYNONYM up regulation of transmembrane iron ion transport
2008-09-06 GO:0034761 positive regulation of iron ion transmembrane transport Added SYNONYM up-regulation of transmembrane iron ion transport
2008-09-06 GO:0034761 positive regulation of iron ion transmembrane transport Added SYNONYM upregulation of transmembrane iron ion transport
2008-09-06 GO:0034763 negative regulation of transmembrane transport Added SYNONYM down regulation of transmembrane transport
2008-09-06 GO:0034763 negative regulation of transmembrane transport Added SYNONYM down-regulation of transmembrane transport

Relationships

Timestamp GO ID GO Term Name Action Category Detail
2008-09-06 GO:0032186 cellular bud neck septin ring organization Added RELATION part of GO:0010687 (site selection involved in cell cycle cytokinesis)
2008-09-06 GO:0032186 cellular bud neck septin ring organization Deleted RELATION part of GO:0033205 (cell cycle cytokinesis)
2008-09-06 GO:0032186 cellular bud neck septin ring organization Deleted RELATION part of GO:0007105 (cytokinesis, site selection)
2008-09-06 GO:0010687 site selection involved in cell cycle cytokinesis Added RELATION part of GO:0033205 (cell cycle cytokinesis)
2008-09-06 GO:0010687 site selection involved in cell cycle cytokinesis Added RELATION is a GO:0007105 (cytokinesis, site selection)
2008-09-06 GO:0014029 neural crest formation Deleted RELATION part of GO:0014032 (neural crest cell development)
2008-09-06 GO:0014034 neural crest cell fate commitment Added RELATION part of GO:0014029 (neural crest formation)
2008-09-06 GO:0014905 myoblast fusion involved in skeletal muscle regeneration Deleted RELATION part of GO:0014914 (myoblast maturation involved in muscle regeneration)
2008-09-06 GO:0006342 chromatin silencing Deleted RELATION is a GO:0031507 (heterochromatin assembly)
2008-09-06 GO:0006827 high-affinity iron ion transmembrane transport Added RELATION is a GO:0034755 (iron ion transmembrane transport)
2008-09-06 GO:0006827 high-affinity iron ion transmembrane transport Deleted RELATION is a GO:0034220 (ion transmembrane transport)
2008-09-06 GO:0010201 response to continuous far red light stimulus by the high-irradiance response system Added RELATION is a GO:0010218 (response to far red light)
2008-09-06 GO:0010201 response to continuous far red light stimulus by the high-irradiance response system Deleted RELATION is a GO:0009639 (response to red or far red light)
2008-09-06 GO:0010202 response to low fluence red light stimulus Added RELATION is a GO:0009645 (response to low light intensity stimulus)
2008-09-06 GO:0010203 response to very low fluence red light stimulus Added RELATION is a GO:0055122 (response to very low light intensity stimulus)
2008-09-06 GO:0010244 response to low fluence blue light stimulus by blue low-fluence system Added RELATION is a GO:0009645 (response to low light intensity stimulus)
2008-09-06 GO:0000040 low-affinity iron ion transmembrane transport Added RELATION is a GO:0034755 (iron ion transmembrane transport)
2008-09-06 GO:0000040 low-affinity iron ion transmembrane transport Deleted RELATION is a GO:0034220 (ion transmembrane transport)
2008-09-06 GO:0055121 response to high fluence blue light stimulus by blue high-fluence system Added RELATION is a GO:0009644 (response to high light intensity)
2008-09-06 GO:0055121 response to high fluence blue light stimulus by blue high-fluence system Added RELATION is a GO:0009637 (response to blue light)
2008-09-06 GO:0055122 response to very low light intensity stimulus Added RELATION is a GO:0009642 (response to light intensity)
2008-09-06 GO:0034761 positive regulation of iron ion transmembrane transport Added RELATION is a GO:0034758 (positive regulation of iron ion transport)
2008-09-06 GO:0034761 positive regulation of iron ion transmembrane transport Added RELATION positively regulates GO:0034755 (iron ion transmembrane transport)
2008-09-06 GO:0034762 regulation of transmembrane transport Added RELATION regulates GO:0055085 (transmembrane transport)
2008-09-06 GO:0034762 regulation of transmembrane transport Added RELATION is a GO:0051049 (regulation of transport)
2008-09-06 GO:0034763 negative regulation of transmembrane transport Added RELATION negatively regulates GO:0055085 (transmembrane transport)
2008-09-06 GO:0034763 negative regulation of transmembrane transport Added RELATION is a GO:0034762 (regulation of transmembrane transport)
2008-09-06 GO:0034764 positive regulation of transmembrane transport Added RELATION positively regulates GO:0055085 (transmembrane transport)
2008-09-06 GO:0034764 positive regulation of transmembrane transport Added RELATION is a GO:0034762 (regulation of transmembrane transport)
2008-09-06 GO:0034765 regulation of ion transmembrane transport Added RELATION is a GO:0034762 (regulation of transmembrane transport)
2008-09-06 GO:0034765 regulation of ion transmembrane transport Added RELATION regulates GO:0034220 (ion transmembrane transport)
2008-09-06 GO:0034766 negative regulation of ion transmembrane transport Added RELATION is a GO:0034765 (regulation of ion transmembrane transport)
2008-09-06 GO:0034766 negative regulation of ion transmembrane transport Added RELATION negatively regulates GO:0034220 (ion transmembrane transport)
2008-09-06 GO:0034767 positive regulation of ion transmembrane transport Added RELATION is a GO:0034765 (regulation of ion transmembrane transport)
2008-09-06 GO:0034767 positive regulation of ion transmembrane transport Added RELATION positively regulates GO:0034755 (iron ion transmembrane transport)
2008-09-06 GO:0034754 cellular hormone metabolic process Added RELATION is a GO:0044237 (cellular metabolic process)
2008-09-06 GO:0034754 cellular hormone metabolic process Added RELATION is a GO:0042445 (hormone metabolic process)
2008-09-06 GO:0034755 iron ion transmembrane transport Added RELATION is a GO:0034220 (ion transmembrane transport)
2008-09-06 GO:0034755 iron ion transmembrane transport Added RELATION is a GO:0006826 (iron ion transport)
2008-09-06 GO:0034756 regulation of iron ion transport Added RELATION is a GO:0043269 (regulation of ion transport)
2008-09-06 GO:0042445 hormone metabolic process Added RELATION is a GO:0008152 (metabolic process)
2008-09-06 GO:0042445 hormone metabolic process Deleted RELATION is a GO:0044237 (cellular metabolic process)
2008-09-06 GO:0034756 regulation of iron ion transport Added RELATION regulates GO:0006826 (iron ion transport)
2008-09-06 GO:0034757 negative regulation of iron ion transport Added RELATION is a GO:0043271 (negative regulation of ion transport)
2008-09-06 GO:0034757 negative regulation of iron ion transport Added RELATION is a GO:0034756 (regulation of iron ion transport)
2008-09-06 GO:0034757 negative regulation of iron ion transport Added RELATION negatively regulates GO:0006826 (iron ion transport)
2008-09-06 GO:0034758 positive regulation of iron ion transport Added RELATION is a GO:0043270 (positive regulation of ion transport)
2008-09-06 GO:0034758 positive regulation of iron ion transport Added RELATION is a GO:0034756 (regulation of iron ion transport)
2008-09-06 GO:0034758 positive regulation of iron ion transport Added RELATION positively regulates GO:0006826 (iron ion transport)
2008-09-06 GO:0034759 regulation of iron ion transmembrane transport Added RELATION is a GO:0034756 (regulation of iron ion transport)
2008-09-06 GO:0034759 regulation of iron ion transmembrane transport Added RELATION regulates GO:0034755 (iron ion transmembrane transport)
2008-09-06 GO:0034760 negative regulation of iron ion transmembrane transport Added RELATION is a GO:0034757 (negative regulation of iron ion transport)
2008-09-06 GO:0034760 negative regulation of iron ion transmembrane transport Added RELATION negatively regulates GO:0034755 (iron ion transmembrane transport)
2008-09-06 GO:0019988 charged-tRNA amino acid modification Added RELATION is a GO:0006464 (cellular protein modification process)
2008-09-06 GO:0019988 charged-tRNA amino acid modification Deleted RELATION part of GO:0006464 (cellular protein modification process)
2008-09-06 GO:0019988 charged-tRNA amino acid modification Deleted RELATION part of GO:0006412 (translation)
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