spacer

GO Term History: Displaying 170 audit records for all terms for the date 2007-07-29

From (YYYY-MM-DD):
To (YYYY-MM-DD):
Period:
Category:
Terms:
Limit:
Date Specification

You can specify an explicit date range that you are interested in by setting the "From" and "To" parameters; this will limit the data displayed to those changes that were recorded within that (inclusive) date range.

Alternatively, you can use the "Period" parameter to view the GO term changes that occurred over a specific number of Day(s), Week(s), Month(s) or Year(s) before a specified date.

If you do not enter a "To" date, then the period will be relative to the current date. If, however, you do specify a "To" value, then the "Period" value will display records in the timeframe up to and including that specified date.

Category

You can use this field to specify what types of term changes you are interested in seeing.

Terms

You can enter a list of GO Terms in this field to limit the changes displayed. Please note that only changes made to directly listed terms will be displayed, not term descendants.

Limit

The default number of records returned is 500, however you can increase or decrease this limit. In order to prevent possible browser problems, the maximum upper limit is 10,000.

Introduction

This page displays the differences recorded in the full Gene Ontology OBO v1.2 file as audited by the UniProt-GOA database during its daily update cycle.
If there is any delay in uploading the current OBO file, the changes displayed and the date recorded for these changes may not correspond to when the changes to the OBO file were committed.

All changes

Timestamp GO ID GO Term Name Action Category Detail
2007-07-29 GO:0000467 exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) Added TERM exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
2007-07-29 GO:0000468 generation of mature 3'-end of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) Added TERM generation of mature 3'-end of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
2007-07-29 GO:0000470 maturation of LSU-rRNA Added TERM maturation of LSU-rRNA
2007-07-29 GO:0000471 endonucleolytic cleavage in 3'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) Added TERM endonucleolytic cleavage in 3'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
2007-07-29 GO:0000472 endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) Added TERM endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
2007-07-29 GO:0000473 maturation of LSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA) Added TERM maturation of LSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA)
2007-07-29 GO:0000474 maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA) Added TERM maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA)
2007-07-29 GO:0000475 maturation of 2S rRNA Added TERM maturation of 2S rRNA
2007-07-29 GO:0000476 maturation of 4.5S rRNA Added TERM maturation of 4.5S rRNA
2007-07-29 GO:0000478 endonucleolytic cleavage involved in rRNA processing Added TERM endonucleolytic cleavages during rRNA processing
2007-07-29 GO:0000479 endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) Added TERM endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
2007-07-29 GO:0000480 endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) Added TERM endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
2007-07-29 GO:0000481 maturation of 5S rRNA Added TERM maturation of 5S rRNA
2007-07-29 GO:0000482 maturation of 5S rRNA from tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) Added TERM maturation of 5S rRNA from tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
2007-07-29 GO:0000483 endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA) Added TERM endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA)
2007-07-29 GO:0000484 cleavage between SSU-rRNA and 5.8S rRNA of tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA) Added TERM cleavage between SSU-rRNA and 5.8S rRNA of tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA)
2007-07-29 GO:0000485 cleavage between 2S rRNA and LSU-rRNA of tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA) Added TERM cleavage between 2S rRNA and LSU-rRNA of tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA)
2007-07-29 GO:0000486 cleavage between 5.8S rRNA and 2S rRNA of tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA) Added TERM cleavage between 5.8S rRNA and 2S rRNA of tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA)
2007-07-29 GO:0000487 maturation of 5.8S rRNA from tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA) Added TERM maturation of 5.8S rRNA from tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA)
2007-07-29 GO:0000488 maturation of LSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) Added TERM maturation of LSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)
2007-07-29 GO:0000489 maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) Added TERM maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)
2007-07-29 GO:0000447 endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) Added TERM endonucleolytic cleavage between SSU-rRNA and 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
2007-07-29 GO:0000448 cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) Added TERM cleavage between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
2007-07-29 GO:0002103 endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) Added TERM endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)
2007-07-29 GO:0002104 endonucleolytic cleaveage between 4.5S rRNA and 5S rRNA of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) Added TERM endonucleolytic cleaveage between 4.5S rRNA and 5S rRNA of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)
2007-07-29 GO:0002105 endonucleolytic cleaveage between LSU-rRNA and 4.5S rRNA of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) Added TERM endonucleolytic cleaveage between LSU-rRNA and 4.5S rRNA of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)
2007-07-29 GO:0002106 endonucleolytic cleaveage between SSU-rRNA and LSU-rRNA of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) Added TERM endonucleolytic cleaveage between SSU-rRNA and LSU-rRNA of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)
2007-07-29 GO:0002107 generation of mature 3'-end of 5S rRNA generated by RNA polymerase III Added TERM generation of mature 3'-end of 5S rRNA generated by RNA polymerase III
2007-07-29 GO:0002108 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA,5S) Added TERM maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA,5S)
2007-07-29 GO:0002109 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA,5S) Added TERM maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA,5S)
2007-07-29 GO:0002110 cotranscriptional mitochondrial rRNA nucleotide insertion Added TERM cotranscriptional mitochondrial rRNA nucleotide insertion
2007-07-29 GO:0000449 endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 5S) Added TERM endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 5S)
2007-07-29 GO:0000450 cleavage of bicistronic rRNA transcript (SSU-rRNA, LSU-rRNA) Added TERM cleavage of bicistronic rRNA transcript (SSU-rRNA, LSU-rRNA)
2007-07-29 GO:0000451 rRNA 2'-O-methylation Added TERM rRNA 2'-O-methylation
2007-07-29 GO:0000452 snoRNA guided rRNA 2'-O-methylation Added TERM snoRNA guided rRNA 2'-O-methylation
2007-07-29 GO:0000453 enzyme-directed rRNA 2'-O-methylation Added TERM enzyme-directed rRNA 2'-O-methylation
2007-07-29 GO:0000454 snoRNA guided rRNA pseudouridine synthesis Added TERM snoRNA guided rRNA pseudouridine synthesis
2007-07-29 GO:0006365 35S primary transcript processing Deleted TERM 35S primary transcript processing
2007-07-29 GO:0006381 mRNA editing Deleted TERM mRNA editing
2007-07-29 GO:0016547 RNA editing Deleted TERM RNA editing
2007-07-29 GO:0016548 rRNA editing Deleted TERM rRNA editing
2007-07-29 GO:0016549 tRNA editing Deleted TERM tRNA editing
2007-07-29 GO:0000489 maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) Added DEFINITION Any process involved in the maturation of a precursor Small SubUnit (SSU) ribosomal RNA (rRNA) molecule into a mature SSU-rRNA molecule from the pre-rRNA molecule originally produced as a tetracistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, Large Subunit (LSU) the 4.5S rRNA, and the 5S rRNA in that order from 5' to 3' along the primary transcript.
2007-07-29 GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) Added DEFINITION Any process involved in the maturation of a precursor Small SubUnit (SSU) ribosomal RNA (rRNA) molecule into a mature SSU-rRNA molecule from the pre-rRNA molecule originally produced as a tricistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, 5.8S rRNA, and the Large Subunit (LSU) in that order from 5' to 3' along the primary transcript.
2007-07-29 GO:0002109 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA,5S) Added DEFINITION Any process involved in the maturation of a precursor Small SubUnit (SSU) ribosomal RNA (rRNA) molecule into a mature SSU-rRNA molecule from the pre-rRNA molecule originally produced as a tricistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, Large Subunit (LSU) the 5S rRNA in that order from 5' to 3' along the primary transcript.
2007-07-29 GO:0043873 pyruvate-flavodoxin oxidoreductase activity Added DEFINITION Catalysis of the reaction: pyruvate + CoA + oxidized flavodoxin = acetyl-CoA + CO2 + reduced flavodoxin.
2007-07-29 GO:0000451 rRNA 2'-O-methylation Added DEFINITION The addition of a methyl group to the 2'-oxygen atom of a nucleotide residue in an rRNA molecule during ribosome biogenesis.
2007-07-29 GO:0000452 snoRNA guided rRNA 2'-O-methylation Added DEFINITION The posttranscriptional addition of methyl groups to the 2'-oxygen atom of nucleotide residues in an rRNA molecule during ribosome biogenesis using a snoRNA guide that targets the position of methylation.
2007-07-29 GO:0000454 snoRNA guided rRNA pseudouridine synthesis Added DEFINITION The intramolecular conversion of uridine to pseudouridine in an rRNA molecule during ribosome biogenesis using a snoRNA guide that targets the position of pseudouridylation.
2007-07-29 GO:0000479 endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) Added DEFINITION Endonucleolytic cleavage of a pre-rRNA molecule originally produced as a tricistronic rRNA transcript that contains the Small SubUnit (SSU) rRNA, the 5.8S rRNA, and the Large SubUnit (LSU) rRNA, in that order, from 5' to 3' along the primary transcript. Primary ribosomal RNA transcripts with three genes, in this order, are produced in the nuclei of many eukaryotic species, including S. cerevisiae.
2007-07-29 GO:0000449 endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 5S) Added DEFINITION Endonucleolytic cleavage of a pre-rRNA molecule originally produced as a tricistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, the Large Subunit (LSU) rRNA, and the 5S rRNA, in that order, from 5' to 3' along the primary transcript. For example, primary ribosomal RNA transcripts containing three genes, in this order, are produced in E. coli and other prokaryotic species. Note that the use of the word tricistronic refers only to the number of mature rRNA molecules which will be produced from the primary transcript and ignores tRNAs that may also be present within the primary transcript.
2007-07-29 GO:0000461 endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) Added DEFINITION Endonucleolytic cleavage at the 3'-end of the SSU-rRNA from an originally tricistronic rRNA transcript that contained the Small Subunit (SSU) rRNA, the 5.8S rRNA, and the Large Subunit (LSU) rRNA in that order from 5' to 3' along the primary transcript, to produce the mature end of the SSU-rRNA.
2007-07-29 GO:0000472 endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) Added DEFINITION Endonucleolytic cleavage at the 5'-ETS and the 5' end of the SSU-rRNA of a tricistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, the 5.8S rRNA, and the Large Subunit (LSU) rRNA in that order from 5' to 3' along the primary transcript, to produce the mature end of the SSU-rRNA.
2007-07-29 GO:0000478 endonucleolytic cleavage involved in rRNA processing Added DEFINITION Any endonucleolytic cleavage involved in the conversion of a primary ribosomal RNA (rRNA) transcript into a mature rRNA molecule. Some endonucleolytic cleavages produce the mature end, while others are a step in the process of generating the mature end from the pre-rRNA.
2007-07-29 GO:0002104 endonucleolytic cleaveage between 4.5S rRNA and 5S rRNA of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) Added DEFINITION Endonucleolytic cleavage between the 5S rRNA and the 4.5S rRNA of an rRNA molecule originally produced as a tetracistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, Large Subunit (LSU) the 4.5S rRNA, and the 5S rRNA in that order from 5' to 3' along the primary transcript. Note that the use of the word tetracistronic refers only to the number of mature rRNA molecules which will be produced from the primary transcript and ignores tRNAs that may also be present within the primary transcript.
2007-07-29 GO:0002105 endonucleolytic cleaveage between LSU-rRNA and 4.5S rRNA of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) Added DEFINITION Endonucleolytic cleavage between the LSU-rRNA and the 4.5S rRNA of an rRNA molecule originally produced as a tetracistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, Large Subunit (LSU) the 4.5S rRNA, and the 5S rRNA in that order from 5' to 3' along the primary transcript. Note that the use of the word tetracistronic refers only to the number of mature rRNA molecules which will be produced from the primary transcript and ignores tRNAs that may also be present within the primary transcript.
2007-07-29 GO:0002106 endonucleolytic cleaveage between SSU-rRNA and LSU-rRNA of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) Added DEFINITION Endonucleolytic cleavages between the SSU-rRNA and the LSU-rRNA of an rRNA molecule originally produced as a tetracistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, Large Subunit (LSU) the 4.5S rRNA, and the 5S rRNA in that order from 5' to 3' along the primary transcript. These cleavages liberate tRNAs from the polycistronic transcript as well as separating the SSU and LSU containing transcript. Note that the use of the word tetracistronic refers only to the number of mature rRNA molecules which will be produced from the primary transcript and ignores tRNAs that may also be present within the primary transcript.
2007-07-29 GO:0000453 enzyme-directed rRNA 2'-O-methylation Added DEFINITION The addition of methyl groups to the 2'-oxygen atom of nucleotide residues in an rRNA molecule during ribosome biogenesis where the methylase specifies the site that becomes methylated without using a guide RNA.
2007-07-29 GO:0000455 enzyme-directed rRNA pseudouridine synthesis Added DEFINITION The intramolecular conversion of uridine to pseudouridine during ribosome biogenesis where the enzyme specifies the site that becomes pseudouridylated without using a guide RNA.
2007-07-29 GO:0000459 exonucleolytic trimming involved in rRNA processing Added DEFINITION Exonucleolytic digestion of a pre-rRNA molecule in the process to generate a mature rRNA molecule.
2007-07-29 GO:0000467 exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) Added DEFINITION Exonucleolytic digestion of a pre-rRNA molecule to generate the mature 3'-end of a 5.8S rRNA molecule derived from an originally tricistronic pre-rRNA transcript that contained the Small Subunit (SSU) rRNA, the 5.8S rRNA, and the Large Subunit (LSU) rRNA in that order from 5' to 3' along the primary transcript.
2007-07-29 GO:0000465 exonucleolytic trimming to generate mature 5'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) Added DEFINITION Exonucleolytic digestion of a pre-rRNA molecule to generate the mature 5'-end of a 5.8S rRNA molecule derived from an originally tricistronic pre-rRNA transcript that contained the Small Subunit (SSU) rRNA, the 5.8S rRNA, and the Large Subunit (LSU) rRNA in that order from 5' to 3' along the primary transcript.
2007-07-29 GO:0002107 generation of mature 3'-end of 5S rRNA generated by RNA polymerase III Added DEFINITION The removal of extra uridine residues from the 3' end of a 5S pre-rRNA generated by transcription by RNA polymerase III to generate the mature 3'-end.
2007-07-29 GO:0000468 generation of mature 3'-end of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) Added DEFINITION Any process involved in generating the mature 3'-end of an LSU-rRNA derived from a tricistronic rRNA transcript that contained the Small SubUnit (SSU) rRNA, the 5.8S rRNA, and the Large SubUnit (LSU) rRNA, in that order, from 5' to 3' along the primary transcript.
2007-07-29 GO:0000475 maturation of 2S rRNA Added DEFINITION Any process involved in the maturation of a precursor 2S ribosomal RNA (rRNA) molecule into a mature 2S rRNA molecule.
2007-07-29 GO:0000476 maturation of 4.5S rRNA Added DEFINITION Any process involved in the maturation of a precursor 4.5S ribosomal RNA (rRNA) molecule into a mature 4.5S rRNA molecule.
2007-07-29 GO:0000460 maturation of 5.8S rRNA Added DEFINITION Any process involved in the maturation of a precursor 5.8S ribosomal RNA (rRNA) molecule into a mature 5.8S rRNA molecule.
2007-07-29 GO:0000487 maturation of 5.8S rRNA from tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA) Added DEFINITION Any process involved in the maturation of a precursor 5.8S ribosomal RNA (rRNA) molecule into a mature 5.8S rRNA molecule from the pre-rRNA molecule originally produced as a tetracistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, the 8.8S rRNA, the 2S rRNA, and the Large Subunit (LSU) in that order from 5' to 3' along the primary transcript.
2007-07-29 GO:0000466 maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) Added DEFINITION Any process involved in the maturation of an rRNA molecule originally produced as part of a tricistronic rRNA transcript that contained the Small SubUnit (SSU) rRNA, the 5.8S rRNA, and the Large SubUnit (LSU) rRNA, in that order, from 5' to 3' along the primary transcript.
2007-07-29 GO:0000481 maturation of 5S rRNA Added DEFINITION Any process involved in the maturation of a precursor 5S ribosomal RNA (rRNA) molecule into a mature 5S rRNA molecule
2007-07-29 GO:0000482 maturation of 5S rRNA from tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) Added DEFINITION Any process involved in the maturation of a precursor 5S ribosomal RNA (rRNA) molecule into a mature 5S rRNA molecule from the pre-rRNA molecule originally produced as a tetracistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, Large Subunit (LSU) the 4.5S rRNA, and the 5S rRNA in that order from 5' to 3' along the primary transcript.
2007-07-29 GO:0000470 maturation of LSU-rRNA Added DEFINITION Any process involved in the maturation of a precursor Large SubUnit (LSU) ribosomal RNA (rRNA) molecule into a mature LSU-rRNA molecule.
2007-07-29 GO:0043875 2-ketobutyrate formate-lyase activity Added DEFINITION Catalysis of the reaction: 2-oxobutanoate + coenzyme A = propionyl-CoA + formate.
2007-07-29 GO:0043874 acireductone synthase activity Added DEFINITION Catalysis of the reactions: 5-(methylthio)-2,3-dioxopentyl phosphate + H2O = 1,2-dihydroxy-5-(methylthio)pent-1-en-3-one + phosphate (1a) 5-(methylthio)-2,3-dioxopentyl phosphate = 2-hydroxy-5-(methylthio)-3-oxopent-1-enyl phosphate (1b) 2-hydroxy-5-(methylthio)-3-oxopent-1-enyl phosphate + H2O = 1,2-dihydroxy-5-(methylthio)pent-1-en-3-one + phosphate.
2007-07-29 GO:0000485 cleavage between 2S rRNA and LSU-rRNA of tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA) Added DEFINITION Endonucleolytic cleavage beween the LSU-rRNA and the 2S rRNA of an rRNA molecule originally produced as a tetracistronic rRNA transcript that contained the Small SubUnit (SSU) rRNA, the 5.8S rRNA, 2S rRNA, and the Large SubUnit (LSU) rRNA, in that order, from 5' to 3' along the primary transcript.
2007-07-29 GO:0000486 cleavage between 5.8S rRNA and 2S rRNA of tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA) Added DEFINITION Endonucleolytic cleavage beween the 5.8S rRNA and the 2S rRNA of an rRNA molecule originally produced as a tetracistronic rRNA transcript that contained the Small SubUnit (SSU) rRNA, the 5.8S rRNA, 2S rRNA, and the Large SubUnit (LSU) rRNA, in that order, from 5' to 3' along the primary transcript.
2007-07-29 GO:0000448 cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) Added DEFINITION Endonucleolytic cleavage between the 5.8S rRNA and the LSU-rRNA of an rRNA molecule originally produced as a tricistronic rRNA transcript that contained the Small SubUnit (SSU) rRNA, the 5.8S rRNA, and the Large SubUnit (LSU) rRNA, in that order, from 5' to 3' along the primary transcript.
2007-07-29 GO:0000484 cleavage between SSU-rRNA and 5.8S rRNA of tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA) Added DEFINITION Endonucleolytic cleavage beween the SSU-rRNA and the 5.8S rRNA of an rRNA molecule originally produced as a tetracistronic rRNA transcript that contained the Small SubUnit (SSU) rRNA, the 5.8S rRNA, 2S rRNA, and the Large SubUnit (LSU) rRNA, in that order, from 5' to 3' along the primary transcript.
2007-07-29 GO:0000450 cleavage of bicistronic rRNA transcript (SSU-rRNA, LSU-rRNA) Added DEFINITION Endonucleolytic cleavage of pre-rRNAs originally produced as a bicistronic rRNA transcript that contains the SSU-rRNA and the LSU-rRNA in that order from 5' to 3' along the primary transcript. Primary ribosomal RNA transcripts with two genes in this order are produced in Archaeal species.
2007-07-29 GO:0002110 cotranscriptional mitochondrial rRNA nucleotide insertion Added DEFINITION The insertion of one or two non-coded nucleotides during the transcription of a mitochondrial rRNA. Such additions are known to occur in myxomycetes such as Physarum, Didymium, and Stemonitis.
2007-07-29 GO:0000456 dimethylation involved in SSU-rRNA maturation Added DEFINITION Dimethyation of the N6 amino groups of two consecutive adenosine residues near the 3'-end of the SSU rRNA. This process has been conserved from bacteria to eukaryotes.
2007-07-29 GO:0000458 endonucleolytic cleavage between LSU-rRNA and 5S rRNA of tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 5S) Added DEFINITION Endonucleolytic cleavage to separate a pre-LSU-rRNA from a pre-5S rRNA originally produced as a tricistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, the Large Subunit (LSU) rRNA, and the 5S rRNA, in that order, from 5' to 3' along the primary transcript. Note that the use of the word tricistronic refers only to the number of mature rRNA molecules which will be produced from the primary transcript and ignores tRNAs that may also be present within the primary transcript.
2007-07-29 GO:0000447 endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) Added DEFINITION Endonucleolytic cleavage beween the SSU-rRNA and the 5.8S rRNA of an rRNA molecule originally produced as a tricistronic rRNA transcript that contained the Small SubUnit (SSU) rRNA, the 5.8S rRNA, and the Large SubUnit (LSU) rRNA, in that order, from 5' to 3' along the primary transcript.
2007-07-29 GO:0000457 endonucleolytic cleavage between SSU-rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 5S) Added DEFINITION Endonucleolytic cleavage to separate a pre-SSU-rRNA from a pre-LSU-rRNA originally produced as a tricistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, the Large Subunit (LSU) rRNA, and the 5S rRNA, in that order, from 5' to 3' along the primary transcript. Note that the use of the word tricistronic refers only to the number of mature rRNA molecules which will be produced from the primary transcript and ignores tRNAs that may also be present within the primary transcript.
2007-07-29 GO:0000471 endonucleolytic cleavage in 3'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) Added DEFINITION Endonucleolytic cleavage within the 3'-External Transcribed Spacer (ETS) of a tricistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, the 5.8S rRNA, and the Large Subunit (LSU) rRNA in that order from 5' to 3' along the primary transcript. In S. cerevisiae, endonucleolytic cleavage within the 3'-ETS of the pre-RNA, which may occur cotranscriptionally, is the first step in rRNA processing, and initiates a cascade of subsequent processing and modification events.
2007-07-29 GO:0000480 endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) Added DEFINITION Endonucleolytic cleavage within the 5'-External Transcribed Spacer (ETS) of a tricistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, the 5.8S rRNA, and the Large Subunit (LSU) rRNA in that order from 5' to 3' along the primary transcript. Endonucleolytic cleavage within the 5'-ETS of the pre-RNA is conserved as one of the early steps of rRNA processing in all eukaryotes, but the specific position of cleavage is variable.
2007-07-29 GO:0000464 endonucleolytic cleavage in ITS1 upstream of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) Added DEFINITION Endonucleolytic cleavage within Internal Transcribed Spacer 1 (ITS1) upstream of the 5.8S rRNA derived from an originally tricistronic rRNA transcript that contained the Small Subunit (SSU) rRNA, the 5.8S rRNA, and the Large Subunit (LSU) rRNA in that order from 5' to 3' along the primary transcript. In S. cerevisiae, this endonucleolytic cleavage within ITS1 initiates the maturation of the LSU and the 5.8S rRNAs.
2007-07-29 GO:0000483 endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA) Added DEFINITION Endonucleolytic cleavage of a pre-rRNA molecule originally produced as a tetracistronic rRNA transcript that contains the Small SubUnit (SSU) rRNA, the 5.8S rRNA, 2S rRNA, and the Large SubUnit (LSU) rRNA, in that order, from 5' to 3' along the primary transcript. Primary ribosomal RNA transcripts with four genes, in this order, are produced in the nuclei of D. melanogaster as well as in those of other dipteran species.
2007-07-29 GO:0002103 endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) Added DEFINITION Endonucleolytic cleavage of a pre-rRNA molecule originally produced as a tetracistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, Large Subunit (LSU) the 4.5S rRNA, and the 5S rRNA in that order from 5' to 3' along the primary transcript. Primary ribosomal RNA transcripts with four genes, in this order, are produced in the chloroplasts of vascular plants. Note that the use of the word tetracistronic refers only to the number of mature rRNA molecules which will be produced from the primary transcript and ignores tRNAs that may also be present within the primary transcript.
2007-07-29 GO:0043875 2-ketobutyrate formate-lyase activity Added TERM 2-ketobutyrate formate-lyase activity
2007-07-29 GO:0030490 maturation of SSU-rRNA Updated TERM maturation of SSU-rRNA
2007-07-29 GO:0043716 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase activity Updated TERM 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase activity
2007-07-29 GO:0043873 pyruvate-flavodoxin oxidoreductase activity Added TERM pyruvate-flavodoxin oxidoreductase activity
2007-07-29 GO:0043874 acireductone synthase activity Added TERM acireductone synthase activity
2007-07-29 GO:0000455 enzyme-directed rRNA pseudouridine synthesis Added TERM enzyme-directed rRNA pseudouridine synthesis
2007-07-29 GO:0000456 dimethylation involved in SSU-rRNA maturation Added TERM dimethylation during SSU-rRNA biogenesis
2007-07-29 GO:0000457 endonucleolytic cleavage between SSU-rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 5S) Added TERM endonucleolytic cleavage between SSU-rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 5S)
2007-07-29 GO:0000458 endonucleolytic cleavage between LSU-rRNA and 5S rRNA of tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 5S) Added TERM endonucleolytic cleavage between LSU-rRNA and 5S rRNA of tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 5S)
2007-07-29 GO:0000459 exonucleolytic trimming involved in rRNA processing Added TERM exonucleolytic trimming during rRNA processing
2007-07-29 GO:0000460 maturation of 5.8S rRNA Added TERM maturation of 5.8S rRNA
2007-07-29 GO:0000461 endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) Added TERM endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
2007-07-29 GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) Added TERM maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
2007-07-29 GO:0000463 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) Added TERM maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
2007-07-29 GO:0000464 endonucleolytic cleavage in ITS1 upstream of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) Added TERM endonucleolytic cleavage in ITS1 upstream of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
2007-07-29 GO:0000465 exonucleolytic trimming to generate mature 5'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) Added TERM exonucleolytic trimming to generate mature 5'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
2007-07-29 GO:0000466 maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) Added TERM maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
2007-07-29 GO:0043715 2,3-diketo-5-methylthiopentyl-1-phosphate enolase activity Added XREF MetaCyc:R82-RXN
2007-07-29 GO:0043873 pyruvate-flavodoxin oxidoreductase activity Added XREF MetaCyc:PYFLAVOXRE-RXN
2007-07-29 GO:0043873 pyruvate-flavodoxin oxidoreductase activity Added XREF EC:1.2.7.-
2007-07-29 GO:0043874 acireductone synthase activity Added XREF MetaCyc:3.1.3.77-RXN
2007-07-29 GO:0043874 acireductone synthase activity Added XREF EC:3.1.3.77
2007-07-29 GO:0043875 2-ketobutyrate formate-lyase activity Added XREF MetaCyc:KETOBUTFORMLY-RXN
2007-07-29 GO:0043875 2-ketobutyrate formate-lyase activity Added XREF EC:2.3.1-
2007-07-29 GO:0016556 mRNA modification Added SECONDARY GO:0006381 (mRNA editing)
2007-07-29 GO:0006364 rRNA processing Added SECONDARY GO:0006365 (35S primary transcript processing)
2007-07-29 GO:0006400 tRNA modification Added SECONDARY GO:0016549 (tRNA editing)
2007-07-29 GO:0009451 RNA modification Added SECONDARY GO:0016547 (RNA editing)
2007-07-29 GO:0000154 rRNA modification Added SECONDARY GO:0016548 (rRNA editing)
2007-07-29 GO:0008980 propionate kinase activity Added XREF EC:2.7.2.15
2007-07-29 GO:0008980 propionate kinase activity Deleted XREF EC:2.7.2.-
2007-07-29 GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity Added XREF MetaCyc:R147-RXN
2007-07-29 GO:0043715 2,3-diketo-5-methylthiopentyl-1-phosphate enolase activity Deleted SYNONYM DK-MTP-1-P enolase activity
2007-07-29 GO:0043716 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase activity Deleted SYNONYM HK-MTPenyl-1-P phosphatase
2007-07-29 GO:0000154 rRNA modification Added SYNONYM rRNA editing
2007-07-29 GO:0043875 2-ketobutyrate formate-lyase activity Added SYNONYM keto-acid formate acetyltransferase
2007-07-29 GO:0043875 2-ketobutyrate formate-lyase activity Added SYNONYM keto-acid formate-lyase
2007-07-29 GO:0043715 2,3-diketo-5-methylthiopentyl-1-phosphate enolase activity Added SYNONYM E-1
2007-07-29 GO:0043715 2,3-diketo-5-methylthiopentyl-1-phosphate enolase activity Added SYNONYM MasA
2007-07-29 GO:0043715 2,3-diketo-5-methylthiopentyl-1-phosphate enolase activity Added SYNONYM mtnW
2007-07-29 GO:0043716 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase activity Added SYNONYM HK-MTPenyl-1-P phosphatase
2007-07-29 GO:0043873 pyruvate-flavodoxin oxidoreductase activity Added SYNONYM NifJ
2007-07-29 GO:0043873 pyruvate-flavodoxin oxidoreductase activity Added SYNONYM pyruvate:flavodoxin oxidoreductase activity
2007-07-29 GO:0043874 acireductone synthase activity Added SYNONYM E-1
2007-07-29 GO:0043874 acireductone synthase activity Added SYNONYM E-1 enolase-phosphatase
2007-07-29 GO:0043875 2-ketobutyrate formate-lyase activity Added SYNONYM KFL
2007-07-29 GO:0043875 2-ketobutyrate formate-lyase activity Added SYNONYM TdcE
2007-07-29 GO:0000447 endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) Added SYNONYM endonucleolytic cleavage at A2
2007-07-29 GO:0000448 cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) Added SYNONYM cleavage at C2
2007-07-29 GO:0000461 endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) Added SYNONYM endonucleolytic cleavage at site D
2007-07-29 GO:0000464 endonucleolytic cleavage in ITS1 upstream of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) Added SYNONYM endonucleolytic cleavage at A3
2007-07-29 GO:0000468 generation of mature 3'-end of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) Added SYNONYM processing at B2
2007-07-29 GO:0000472 endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) Added SYNONYM endonucleolytic cleavage at A1
2007-07-29 GO:0000480 endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) Added SYNONYM endonucleolytic cleavage at A-prime
2007-07-29 GO:0000480 endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) Added SYNONYM endonucleolytic cleavage at A0
2007-07-29 GO:0006364 rRNA processing Added SYNONYM 35S primary transcript processing
2007-07-29 GO:0006400 tRNA modification Added SYNONYM tRNA editing
2007-07-29 GO:0008980 propionate kinase activity Added SYNONYM ATP:propanoate phosphotransferase
2007-07-29 GO:0008980 propionate kinase activity Added SYNONYM PduW
2007-07-29 GO:0008980 propionate kinase activity Added SYNONYM TdcD
2007-07-29 GO:0008980 propionate kinase activity Added SYNONYM propionate/acetate kinase
2007-07-29 GO:0009451 RNA modification Added SYNONYM RNA editing
2007-07-29 GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity Added SYNONYM 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase
2007-07-29 GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity Added SYNONYM 2-hydroxy-3-keto-5-thiomethylpent-1-ene dioxygenase
2007-07-29 GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity Added SYNONYM ARD'
2007-07-29 GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity Added SYNONYM ARD1
2007-07-29 GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity Added SYNONYM E-2'
2007-07-29 GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity Added SYNONYM aci-reductone dioxygenase
2007-07-29 GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity Added SYNONYM acireductone dioxygenase
2007-07-29 GO:0016556 mRNA modification Added SYNONYM mRNA editing
2007-07-29 GO:0030490 maturation of SSU-rRNA Added SYNONYM processing of 20S pre-rRNA
2007-07-29 GO:0043715 2,3-diketo-5-methylthiopentyl-1-phosphate enolase activity Added SYNONYM DK-MTP-1-P enolase activity
2007-07-29 GO:0006381 mRNA editing Deleted DEFINITION The insertion, deletion or substitution of nucleotides within nascent mRNA transcripts to produce mRNA molecules with sequences that differ from those coded genetically.
2007-07-29 GO:0016547 RNA editing Deleted DEFINITION The insertion, deletion or substitution of nucleotides within nascent RNA transcripts to produce RNA molecules with sequences that differ from those coded genetically.
2007-07-29 GO:0016548 rRNA editing Deleted DEFINITION The insertion, deletion or substitution of nucleotides within nascent rRNA transcripts to produce rRNA molecules with sequences that differ from those coded genetically.
2007-07-29 GO:0016549 tRNA editing Deleted DEFINITION The chemical modification of nucleotides within the primary transcript of transfer RNA (tRNA), necessary to form a mature tRNA.
2007-07-29 GO:0000473 maturation of LSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA) Added DEFINITION Any process involved in the maturation of a precursor Large SubUnit (LSU) ribosomal RNA (rRNA) molecule into a mature LSU-rRNA molecule from the pre-rRNA molecule originally produced as a tetracistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, 5.8 S rRNA, 2S rRNA, and Large Subunit (LSU) in that order from 5' to 3' along the primary transcript.
2007-07-29 GO:0000488 maturation of LSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) Added DEFINITION Any process involved in the maturation of a precursor Large SubUnit (LSU) ribosomal RNA (rRNA) molecule into a mature LSU-rRNA molecule from the pre-rRNA molecule originally produced as a tetracistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, Large Subunit (LSU) the 4.5S rRNA, and the 5S rRNA in that order from 5' to 3' along the primary transcript.
2007-07-29 GO:0000463 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) Added DEFINITION Any process involved in the maturation of a precursor Large SubUnit (LSU) ribosomal RNA (rRNA) molecule into a mature LSU-rRNA molecule.
2007-07-29 GO:0002108 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA,5S) Added DEFINITION Any process involved in the maturation of a precursor Large SubUnit (LSU) ribosomal RNA (rRNA) molecule into a mature LSU-rRNA molecule from the pre-rRNA molecule originally produced as a tricistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, Large Subunit (LSU) the 5S rRNA in that order from 5' to 3' along the primary transcript.
2007-07-29 GO:0000474 maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA) Added DEFINITION Any process involved in the maturation of a precursor Small SubUnit (SSU) ribosomal RNA (rRNA) molecule into a mature SSU-rRNA molecule from the pre-rRNA molecule originally produced as a tetracistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, 5.8 S rRNA, 2S rRNA, and Large Subunit (LSU) in that order from 5' to 3' along the primary transcript.

Terms

Timestamp GO ID GO Term Name Action Category Detail
2007-07-29 GO:0000467 exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) Added TERM exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
2007-07-29 GO:0000468 generation of mature 3'-end of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) Added TERM generation of mature 3'-end of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
2007-07-29 GO:0000470 maturation of LSU-rRNA Added TERM maturation of LSU-rRNA
2007-07-29 GO:0000471 endonucleolytic cleavage in 3'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) Added TERM endonucleolytic cleavage in 3'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
2007-07-29 GO:0000472 endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) Added TERM endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
2007-07-29 GO:0000473 maturation of LSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA) Added TERM maturation of LSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA)
2007-07-29 GO:0000474 maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA) Added TERM maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA)
2007-07-29 GO:0000475 maturation of 2S rRNA Added TERM maturation of 2S rRNA
2007-07-29 GO:0000476 maturation of 4.5S rRNA Added TERM maturation of 4.5S rRNA
2007-07-29 GO:0000478 endonucleolytic cleavage involved in rRNA processing Added TERM endonucleolytic cleavages during rRNA processing
2007-07-29 GO:0000479 endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) Added TERM endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
2007-07-29 GO:0000480 endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) Added TERM endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
2007-07-29 GO:0000481 maturation of 5S rRNA Added TERM maturation of 5S rRNA
2007-07-29 GO:0000482 maturation of 5S rRNA from tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) Added TERM maturation of 5S rRNA from tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
2007-07-29 GO:0000483 endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA) Added TERM endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA)
2007-07-29 GO:0000484 cleavage between SSU-rRNA and 5.8S rRNA of tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA) Added TERM cleavage between SSU-rRNA and 5.8S rRNA of tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA)
2007-07-29 GO:0000485 cleavage between 2S rRNA and LSU-rRNA of tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA) Added TERM cleavage between 2S rRNA and LSU-rRNA of tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA)
2007-07-29 GO:0000486 cleavage between 5.8S rRNA and 2S rRNA of tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA) Added TERM cleavage between 5.8S rRNA and 2S rRNA of tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA)
2007-07-29 GO:0000487 maturation of 5.8S rRNA from tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA) Added TERM maturation of 5.8S rRNA from tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA)
2007-07-29 GO:0000488 maturation of LSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) Added TERM maturation of LSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)
2007-07-29 GO:0000489 maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) Added TERM maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)
2007-07-29 GO:0000447 endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) Added TERM endonucleolytic cleavage between SSU-rRNA and 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
2007-07-29 GO:0000448 cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) Added TERM cleavage between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
2007-07-29 GO:0002103 endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) Added TERM endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)
2007-07-29 GO:0002104 endonucleolytic cleaveage between 4.5S rRNA and 5S rRNA of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) Added TERM endonucleolytic cleaveage between 4.5S rRNA and 5S rRNA of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)
2007-07-29 GO:0002105 endonucleolytic cleaveage between LSU-rRNA and 4.5S rRNA of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) Added TERM endonucleolytic cleaveage between LSU-rRNA and 4.5S rRNA of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)
2007-07-29 GO:0002106 endonucleolytic cleaveage between SSU-rRNA and LSU-rRNA of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) Added TERM endonucleolytic cleaveage between SSU-rRNA and LSU-rRNA of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)
2007-07-29 GO:0002107 generation of mature 3'-end of 5S rRNA generated by RNA polymerase III Added TERM generation of mature 3'-end of 5S rRNA generated by RNA polymerase III
2007-07-29 GO:0002108 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA,5S) Added TERM maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA,5S)
2007-07-29 GO:0002109 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA,5S) Added TERM maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA,5S)
2007-07-29 GO:0002110 cotranscriptional mitochondrial rRNA nucleotide insertion Added TERM cotranscriptional mitochondrial rRNA nucleotide insertion
2007-07-29 GO:0000449 endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 5S) Added TERM endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 5S)
2007-07-29 GO:0000450 cleavage of bicistronic rRNA transcript (SSU-rRNA, LSU-rRNA) Added TERM cleavage of bicistronic rRNA transcript (SSU-rRNA, LSU-rRNA)
2007-07-29 GO:0000451 rRNA 2'-O-methylation Added TERM rRNA 2'-O-methylation
2007-07-29 GO:0000452 snoRNA guided rRNA 2'-O-methylation Added TERM snoRNA guided rRNA 2'-O-methylation
2007-07-29 GO:0000453 enzyme-directed rRNA 2'-O-methylation Added TERM enzyme-directed rRNA 2'-O-methylation
2007-07-29 GO:0000454 snoRNA guided rRNA pseudouridine synthesis Added TERM snoRNA guided rRNA pseudouridine synthesis
2007-07-29 GO:0006365 35S primary transcript processing Deleted TERM 35S primary transcript processing
2007-07-29 GO:0006381 mRNA editing Deleted TERM mRNA editing
2007-07-29 GO:0016547 RNA editing Deleted TERM RNA editing
2007-07-29 GO:0016548 rRNA editing Deleted TERM rRNA editing
2007-07-29 GO:0016549 tRNA editing Deleted TERM tRNA editing
2007-07-29 GO:0043875 2-ketobutyrate formate-lyase activity Added TERM 2-ketobutyrate formate-lyase activity
2007-07-29 GO:0030490 maturation of SSU-rRNA Updated TERM maturation of SSU-rRNA
2007-07-29 GO:0043716 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase activity Updated TERM 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase activity
2007-07-29 GO:0043873 pyruvate-flavodoxin oxidoreductase activity Added TERM pyruvate-flavodoxin oxidoreductase activity
2007-07-29 GO:0043874 acireductone synthase activity Added TERM acireductone synthase activity
2007-07-29 GO:0000455 enzyme-directed rRNA pseudouridine synthesis Added TERM enzyme-directed rRNA pseudouridine synthesis
2007-07-29 GO:0000456 dimethylation involved in SSU-rRNA maturation Added TERM dimethylation during SSU-rRNA biogenesis
2007-07-29 GO:0000457 endonucleolytic cleavage between SSU-rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 5S) Added TERM endonucleolytic cleavage between SSU-rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 5S)
2007-07-29 GO:0000458 endonucleolytic cleavage between LSU-rRNA and 5S rRNA of tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 5S) Added TERM endonucleolytic cleavage between LSU-rRNA and 5S rRNA of tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 5S)
2007-07-29 GO:0000459 exonucleolytic trimming involved in rRNA processing Added TERM exonucleolytic trimming during rRNA processing
2007-07-29 GO:0000460 maturation of 5.8S rRNA Added TERM maturation of 5.8S rRNA
2007-07-29 GO:0000461 endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) Added TERM endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
2007-07-29 GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) Added TERM maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
2007-07-29 GO:0000463 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) Added TERM maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
2007-07-29 GO:0000464 endonucleolytic cleavage in ITS1 upstream of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) Added TERM endonucleolytic cleavage in ITS1 upstream of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
2007-07-29 GO:0000465 exonucleolytic trimming to generate mature 5'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) Added TERM exonucleolytic trimming to generate mature 5'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
2007-07-29 GO:0000466 maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) Added TERM maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

Definition/synonyms

Timestamp GO ID GO Term Name Action Category Detail
2007-07-29 GO:0000489 maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) Added DEFINITION Any process involved in the maturation of a precursor Small SubUnit (SSU) ribosomal RNA (rRNA) molecule into a mature SSU-rRNA molecule from the pre-rRNA molecule originally produced as a tetracistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, Large Subunit (LSU) the 4.5S rRNA, and the 5S rRNA in that order from 5' to 3' along the primary transcript.
2007-07-29 GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) Added DEFINITION Any process involved in the maturation of a precursor Small SubUnit (SSU) ribosomal RNA (rRNA) molecule into a mature SSU-rRNA molecule from the pre-rRNA molecule originally produced as a tricistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, 5.8S rRNA, and the Large Subunit (LSU) in that order from 5' to 3' along the primary transcript.
2007-07-29 GO:0002109 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA,5S) Added DEFINITION Any process involved in the maturation of a precursor Small SubUnit (SSU) ribosomal RNA (rRNA) molecule into a mature SSU-rRNA molecule from the pre-rRNA molecule originally produced as a tricistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, Large Subunit (LSU) the 5S rRNA in that order from 5' to 3' along the primary transcript.
2007-07-29 GO:0043873 pyruvate-flavodoxin oxidoreductase activity Added DEFINITION Catalysis of the reaction: pyruvate + CoA + oxidized flavodoxin = acetyl-CoA + CO2 + reduced flavodoxin.
2007-07-29 GO:0000451 rRNA 2'-O-methylation Added DEFINITION The addition of a methyl group to the 2'-oxygen atom of a nucleotide residue in an rRNA molecule during ribosome biogenesis.
2007-07-29 GO:0000452 snoRNA guided rRNA 2'-O-methylation Added DEFINITION The posttranscriptional addition of methyl groups to the 2'-oxygen atom of nucleotide residues in an rRNA molecule during ribosome biogenesis using a snoRNA guide that targets the position of methylation.
2007-07-29 GO:0000454 snoRNA guided rRNA pseudouridine synthesis Added DEFINITION The intramolecular conversion of uridine to pseudouridine in an rRNA molecule during ribosome biogenesis using a snoRNA guide that targets the position of pseudouridylation.
2007-07-29 GO:0000479 endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) Added DEFINITION Endonucleolytic cleavage of a pre-rRNA molecule originally produced as a tricistronic rRNA transcript that contains the Small SubUnit (SSU) rRNA, the 5.8S rRNA, and the Large SubUnit (LSU) rRNA, in that order, from 5' to 3' along the primary transcript. Primary ribosomal RNA transcripts with three genes, in this order, are produced in the nuclei of many eukaryotic species, including S. cerevisiae.
2007-07-29 GO:0000449 endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 5S) Added DEFINITION Endonucleolytic cleavage of a pre-rRNA molecule originally produced as a tricistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, the Large Subunit (LSU) rRNA, and the 5S rRNA, in that order, from 5' to 3' along the primary transcript. For example, primary ribosomal RNA transcripts containing three genes, in this order, are produced in E. coli and other prokaryotic species. Note that the use of the word tricistronic refers only to the number of mature rRNA molecules which will be produced from the primary transcript and ignores tRNAs that may also be present within the primary transcript.
2007-07-29 GO:0000461 endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) Added DEFINITION Endonucleolytic cleavage at the 3'-end of the SSU-rRNA from an originally tricistronic rRNA transcript that contained the Small Subunit (SSU) rRNA, the 5.8S rRNA, and the Large Subunit (LSU) rRNA in that order from 5' to 3' along the primary transcript, to produce the mature end of the SSU-rRNA.
2007-07-29 GO:0000472 endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) Added DEFINITION Endonucleolytic cleavage at the 5'-ETS and the 5' end of the SSU-rRNA of a tricistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, the 5.8S rRNA, and the Large Subunit (LSU) rRNA in that order from 5' to 3' along the primary transcript, to produce the mature end of the SSU-rRNA.
2007-07-29 GO:0000478 endonucleolytic cleavage involved in rRNA processing Added DEFINITION Any endonucleolytic cleavage involved in the conversion of a primary ribosomal RNA (rRNA) transcript into a mature rRNA molecule. Some endonucleolytic cleavages produce the mature end, while others are a step in the process of generating the mature end from the pre-rRNA.
2007-07-29 GO:0002104 endonucleolytic cleaveage between 4.5S rRNA and 5S rRNA of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) Added DEFINITION Endonucleolytic cleavage between the 5S rRNA and the 4.5S rRNA of an rRNA molecule originally produced as a tetracistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, Large Subunit (LSU) the 4.5S rRNA, and the 5S rRNA in that order from 5' to 3' along the primary transcript. Note that the use of the word tetracistronic refers only to the number of mature rRNA molecules which will be produced from the primary transcript and ignores tRNAs that may also be present within the primary transcript.
2007-07-29 GO:0002105 endonucleolytic cleaveage between LSU-rRNA and 4.5S rRNA of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) Added DEFINITION Endonucleolytic cleavage between the LSU-rRNA and the 4.5S rRNA of an rRNA molecule originally produced as a tetracistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, Large Subunit (LSU) the 4.5S rRNA, and the 5S rRNA in that order from 5' to 3' along the primary transcript. Note that the use of the word tetracistronic refers only to the number of mature rRNA molecules which will be produced from the primary transcript and ignores tRNAs that may also be present within the primary transcript.
2007-07-29 GO:0002106 endonucleolytic cleaveage between SSU-rRNA and LSU-rRNA of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) Added DEFINITION Endonucleolytic cleavages between the SSU-rRNA and the LSU-rRNA of an rRNA molecule originally produced as a tetracistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, Large Subunit (LSU) the 4.5S rRNA, and the 5S rRNA in that order from 5' to 3' along the primary transcript. These cleavages liberate tRNAs from the polycistronic transcript as well as separating the SSU and LSU containing transcript. Note that the use of the word tetracistronic refers only to the number of mature rRNA molecules which will be produced from the primary transcript and ignores tRNAs that may also be present within the primary transcript.
2007-07-29 GO:0000453 enzyme-directed rRNA 2'-O-methylation Added DEFINITION The addition of methyl groups to the 2'-oxygen atom of nucleotide residues in an rRNA molecule during ribosome biogenesis where the methylase specifies the site that becomes methylated without using a guide RNA.
2007-07-29 GO:0000455 enzyme-directed rRNA pseudouridine synthesis Added DEFINITION The intramolecular conversion of uridine to pseudouridine during ribosome biogenesis where the enzyme specifies the site that becomes pseudouridylated without using a guide RNA.
2007-07-29 GO:0000459 exonucleolytic trimming involved in rRNA processing Added DEFINITION Exonucleolytic digestion of a pre-rRNA molecule in the process to generate a mature rRNA molecule.
2007-07-29 GO:0000467 exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) Added DEFINITION Exonucleolytic digestion of a pre-rRNA molecule to generate the mature 3'-end of a 5.8S rRNA molecule derived from an originally tricistronic pre-rRNA transcript that contained the Small Subunit (SSU) rRNA, the 5.8S rRNA, and the Large Subunit (LSU) rRNA in that order from 5' to 3' along the primary transcript.
2007-07-29 GO:0000465 exonucleolytic trimming to generate mature 5'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) Added DEFINITION Exonucleolytic digestion of a pre-rRNA molecule to generate the mature 5'-end of a 5.8S rRNA molecule derived from an originally tricistronic pre-rRNA transcript that contained the Small Subunit (SSU) rRNA, the 5.8S rRNA, and the Large Subunit (LSU) rRNA in that order from 5' to 3' along the primary transcript.
2007-07-29 GO:0002107 generation of mature 3'-end of 5S rRNA generated by RNA polymerase III Added DEFINITION The removal of extra uridine residues from the 3' end of a 5S pre-rRNA generated by transcription by RNA polymerase III to generate the mature 3'-end.
2007-07-29 GO:0000468 generation of mature 3'-end of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) Added DEFINITION Any process involved in generating the mature 3'-end of an LSU-rRNA derived from a tricistronic rRNA transcript that contained the Small SubUnit (SSU) rRNA, the 5.8S rRNA, and the Large SubUnit (LSU) rRNA, in that order, from 5' to 3' along the primary transcript.
2007-07-29 GO:0000475 maturation of 2S rRNA Added DEFINITION Any process involved in the maturation of a precursor 2S ribosomal RNA (rRNA) molecule into a mature 2S rRNA molecule.
2007-07-29 GO:0000476 maturation of 4.5S rRNA Added DEFINITION Any process involved in the maturation of a precursor 4.5S ribosomal RNA (rRNA) molecule into a mature 4.5S rRNA molecule.
2007-07-29 GO:0000460 maturation of 5.8S rRNA Added DEFINITION Any process involved in the maturation of a precursor 5.8S ribosomal RNA (rRNA) molecule into a mature 5.8S rRNA molecule.
2007-07-29 GO:0000487 maturation of 5.8S rRNA from tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA) Added DEFINITION Any process involved in the maturation of a precursor 5.8S ribosomal RNA (rRNA) molecule into a mature 5.8S rRNA molecule from the pre-rRNA molecule originally produced as a tetracistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, the 8.8S rRNA, the 2S rRNA, and the Large Subunit (LSU) in that order from 5' to 3' along the primary transcript.
2007-07-29 GO:0000466 maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) Added DEFINITION Any process involved in the maturation of an rRNA molecule originally produced as part of a tricistronic rRNA transcript that contained the Small SubUnit (SSU) rRNA, the 5.8S rRNA, and the Large SubUnit (LSU) rRNA, in that order, from 5' to 3' along the primary transcript.
2007-07-29 GO:0000481 maturation of 5S rRNA Added DEFINITION Any process involved in the maturation of a precursor 5S ribosomal RNA (rRNA) molecule into a mature 5S rRNA molecule
2007-07-29 GO:0000482 maturation of 5S rRNA from tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) Added DEFINITION Any process involved in the maturation of a precursor 5S ribosomal RNA (rRNA) molecule into a mature 5S rRNA molecule from the pre-rRNA molecule originally produced as a tetracistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, Large Subunit (LSU) the 4.5S rRNA, and the 5S rRNA in that order from 5' to 3' along the primary transcript.
2007-07-29 GO:0000470 maturation of LSU-rRNA Added DEFINITION Any process involved in the maturation of a precursor Large SubUnit (LSU) ribosomal RNA (rRNA) molecule into a mature LSU-rRNA molecule.
2007-07-29 GO:0043875 2-ketobutyrate formate-lyase activity Added DEFINITION Catalysis of the reaction: 2-oxobutanoate + coenzyme A = propionyl-CoA + formate.
2007-07-29 GO:0043874 acireductone synthase activity Added DEFINITION Catalysis of the reactions: 5-(methylthio)-2,3-dioxopentyl phosphate + H2O = 1,2-dihydroxy-5-(methylthio)pent-1-en-3-one + phosphate (1a) 5-(methylthio)-2,3-dioxopentyl phosphate = 2-hydroxy-5-(methylthio)-3-oxopent-1-enyl phosphate (1b) 2-hydroxy-5-(methylthio)-3-oxopent-1-enyl phosphate + H2O = 1,2-dihydroxy-5-(methylthio)pent-1-en-3-one + phosphate.
2007-07-29 GO:0000485 cleavage between 2S rRNA and LSU-rRNA of tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA) Added DEFINITION Endonucleolytic cleavage beween the LSU-rRNA and the 2S rRNA of an rRNA molecule originally produced as a tetracistronic rRNA transcript that contained the Small SubUnit (SSU) rRNA, the 5.8S rRNA, 2S rRNA, and the Large SubUnit (LSU) rRNA, in that order, from 5' to 3' along the primary transcript.
2007-07-29 GO:0000486 cleavage between 5.8S rRNA and 2S rRNA of tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA) Added DEFINITION Endonucleolytic cleavage beween the 5.8S rRNA and the 2S rRNA of an rRNA molecule originally produced as a tetracistronic rRNA transcript that contained the Small SubUnit (SSU) rRNA, the 5.8S rRNA, 2S rRNA, and the Large SubUnit (LSU) rRNA, in that order, from 5' to 3' along the primary transcript.
2007-07-29 GO:0000448 cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) Added DEFINITION Endonucleolytic cleavage between the 5.8S rRNA and the LSU-rRNA of an rRNA molecule originally produced as a tricistronic rRNA transcript that contained the Small SubUnit (SSU) rRNA, the 5.8S rRNA, and the Large SubUnit (LSU) rRNA, in that order, from 5' to 3' along the primary transcript.
2007-07-29 GO:0000484 cleavage between SSU-rRNA and 5.8S rRNA of tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA) Added DEFINITION Endonucleolytic cleavage beween the SSU-rRNA and the 5.8S rRNA of an rRNA molecule originally produced as a tetracistronic rRNA transcript that contained the Small SubUnit (SSU) rRNA, the 5.8S rRNA, 2S rRNA, and the Large SubUnit (LSU) rRNA, in that order, from 5' to 3' along the primary transcript.
2007-07-29 GO:0000450 cleavage of bicistronic rRNA transcript (SSU-rRNA, LSU-rRNA) Added DEFINITION Endonucleolytic cleavage of pre-rRNAs originally produced as a bicistronic rRNA transcript that contains the SSU-rRNA and the LSU-rRNA in that order from 5' to 3' along the primary transcript. Primary ribosomal RNA transcripts with two genes in this order are produced in Archaeal species.
2007-07-29 GO:0002110 cotranscriptional mitochondrial rRNA nucleotide insertion Added DEFINITION The insertion of one or two non-coded nucleotides during the transcription of a mitochondrial rRNA. Such additions are known to occur in myxomycetes such as Physarum, Didymium, and Stemonitis.
2007-07-29 GO:0000456 dimethylation involved in SSU-rRNA maturation Added DEFINITION Dimethyation of the N6 amino groups of two consecutive adenosine residues near the 3'-end of the SSU rRNA. This process has been conserved from bacteria to eukaryotes.
2007-07-29 GO:0000458 endonucleolytic cleavage between LSU-rRNA and 5S rRNA of tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 5S) Added DEFINITION Endonucleolytic cleavage to separate a pre-LSU-rRNA from a pre-5S rRNA originally produced as a tricistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, the Large Subunit (LSU) rRNA, and the 5S rRNA, in that order, from 5' to 3' along the primary transcript. Note that the use of the word tricistronic refers only to the number of mature rRNA molecules which will be produced from the primary transcript and ignores tRNAs that may also be present within the primary transcript.
2007-07-29 GO:0000447 endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) Added DEFINITION Endonucleolytic cleavage beween the SSU-rRNA and the 5.8S rRNA of an rRNA molecule originally produced as a tricistronic rRNA transcript that contained the Small SubUnit (SSU) rRNA, the 5.8S rRNA, and the Large SubUnit (LSU) rRNA, in that order, from 5' to 3' along the primary transcript.
2007-07-29 GO:0000457 endonucleolytic cleavage between SSU-rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 5S) Added DEFINITION Endonucleolytic cleavage to separate a pre-SSU-rRNA from a pre-LSU-rRNA originally produced as a tricistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, the Large Subunit (LSU) rRNA, and the 5S rRNA, in that order, from 5' to 3' along the primary transcript. Note that the use of the word tricistronic refers only to the number of mature rRNA molecules which will be produced from the primary transcript and ignores tRNAs that may also be present within the primary transcript.
2007-07-29 GO:0000471 endonucleolytic cleavage in 3'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) Added DEFINITION Endonucleolytic cleavage within the 3'-External Transcribed Spacer (ETS) of a tricistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, the 5.8S rRNA, and the Large Subunit (LSU) rRNA in that order from 5' to 3' along the primary transcript. In S. cerevisiae, endonucleolytic cleavage within the 3'-ETS of the pre-RNA, which may occur cotranscriptionally, is the first step in rRNA processing, and initiates a cascade of subsequent processing and modification events.
2007-07-29 GO:0000480 endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) Added DEFINITION Endonucleolytic cleavage within the 5'-External Transcribed Spacer (ETS) of a tricistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, the 5.8S rRNA, and the Large Subunit (LSU) rRNA in that order from 5' to 3' along the primary transcript. Endonucleolytic cleavage within the 5'-ETS of the pre-RNA is conserved as one of the early steps of rRNA processing in all eukaryotes, but the specific position of cleavage is variable.
2007-07-29 GO:0000464 endonucleolytic cleavage in ITS1 upstream of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) Added DEFINITION Endonucleolytic cleavage within Internal Transcribed Spacer 1 (ITS1) upstream of the 5.8S rRNA derived from an originally tricistronic rRNA transcript that contained the Small Subunit (SSU) rRNA, the 5.8S rRNA, and the Large Subunit (LSU) rRNA in that order from 5' to 3' along the primary transcript. In S. cerevisiae, this endonucleolytic cleavage within ITS1 initiates the maturation of the LSU and the 5.8S rRNAs.
2007-07-29 GO:0000483 endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA) Added DEFINITION Endonucleolytic cleavage of a pre-rRNA molecule originally produced as a tetracistronic rRNA transcript that contains the Small SubUnit (SSU) rRNA, the 5.8S rRNA, 2S rRNA, and the Large SubUnit (LSU) rRNA, in that order, from 5' to 3' along the primary transcript. Primary ribosomal RNA transcripts with four genes, in this order, are produced in the nuclei of D. melanogaster as well as in those of other dipteran species.
2007-07-29 GO:0002103 endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) Added DEFINITION Endonucleolytic cleavage of a pre-rRNA molecule originally produced as a tetracistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, Large Subunit (LSU) the 4.5S rRNA, and the 5S rRNA in that order from 5' to 3' along the primary transcript. Primary ribosomal RNA transcripts with four genes, in this order, are produced in the chloroplasts of vascular plants. Note that the use of the word tetracistronic refers only to the number of mature rRNA molecules which will be produced from the primary transcript and ignores tRNAs that may also be present within the primary transcript.
2007-07-29 GO:0043715 2,3-diketo-5-methylthiopentyl-1-phosphate enolase activity Deleted SYNONYM DK-MTP-1-P enolase activity
2007-07-29 GO:0043716 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase activity Deleted SYNONYM HK-MTPenyl-1-P phosphatase
2007-07-29 GO:0000154 rRNA modification Added SYNONYM rRNA editing
2007-07-29 GO:0043875 2-ketobutyrate formate-lyase activity Added SYNONYM keto-acid formate acetyltransferase
2007-07-29 GO:0043875 2-ketobutyrate formate-lyase activity Added SYNONYM keto-acid formate-lyase
2007-07-29 GO:0043715 2,3-diketo-5-methylthiopentyl-1-phosphate enolase activity Added SYNONYM E-1
2007-07-29 GO:0043715 2,3-diketo-5-methylthiopentyl-1-phosphate enolase activity Added SYNONYM MasA
2007-07-29 GO:0043715 2,3-diketo-5-methylthiopentyl-1-phosphate enolase activity Added SYNONYM mtnW
2007-07-29 GO:0043716 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase activity Added SYNONYM HK-MTPenyl-1-P phosphatase
2007-07-29 GO:0043873 pyruvate-flavodoxin oxidoreductase activity Added SYNONYM NifJ
2007-07-29 GO:0043873 pyruvate-flavodoxin oxidoreductase activity Added SYNONYM pyruvate:flavodoxin oxidoreductase activity
2007-07-29 GO:0043874 acireductone synthase activity Added SYNONYM E-1
2007-07-29 GO:0043874 acireductone synthase activity Added SYNONYM E-1 enolase-phosphatase
2007-07-29 GO:0043875 2-ketobutyrate formate-lyase activity Added SYNONYM KFL
2007-07-29 GO:0043875 2-ketobutyrate formate-lyase activity Added SYNONYM TdcE
2007-07-29 GO:0000447 endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) Added SYNONYM endonucleolytic cleavage at A2
2007-07-29 GO:0000448 cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) Added SYNONYM cleavage at C2
2007-07-29 GO:0000461 endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) Added SYNONYM endonucleolytic cleavage at site D
2007-07-29 GO:0000464 endonucleolytic cleavage in ITS1 upstream of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) Added SYNONYM endonucleolytic cleavage at A3
2007-07-29 GO:0000468 generation of mature 3'-end of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) Added SYNONYM processing at B2
2007-07-29 GO:0000472 endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) Added SYNONYM endonucleolytic cleavage at A1
2007-07-29 GO:0000480 endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) Added SYNONYM endonucleolytic cleavage at A-prime
2007-07-29 GO:0000480 endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) Added SYNONYM endonucleolytic cleavage at A0
2007-07-29 GO:0006364 rRNA processing Added SYNONYM 35S primary transcript processing
2007-07-29 GO:0006400 tRNA modification Added SYNONYM tRNA editing
2007-07-29 GO:0008980 propionate kinase activity Added SYNONYM ATP:propanoate phosphotransferase
2007-07-29 GO:0008980 propionate kinase activity Added SYNONYM PduW
2007-07-29 GO:0008980 propionate kinase activity Added SYNONYM TdcD
2007-07-29 GO:0008980 propionate kinase activity Added SYNONYM propionate/acetate kinase
2007-07-29 GO:0009451 RNA modification Added SYNONYM RNA editing
2007-07-29 GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity Added SYNONYM 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase
2007-07-29 GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity Added SYNONYM 2-hydroxy-3-keto-5-thiomethylpent-1-ene dioxygenase
2007-07-29 GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity Added SYNONYM ARD'
2007-07-29 GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity Added SYNONYM ARD1
2007-07-29 GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity Added SYNONYM E-2'
2007-07-29 GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity Added SYNONYM aci-reductone dioxygenase
2007-07-29 GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity Added SYNONYM acireductone dioxygenase
2007-07-29 GO:0016556 mRNA modification Added SYNONYM mRNA editing
2007-07-29 GO:0030490 maturation of SSU-rRNA Added SYNONYM processing of 20S pre-rRNA
2007-07-29 GO:0043715 2,3-diketo-5-methylthiopentyl-1-phosphate enolase activity Added SYNONYM DK-MTP-1-P enolase activity
2007-07-29 GO:0006381 mRNA editing Deleted DEFINITION The insertion, deletion or substitution of nucleotides within nascent mRNA transcripts to produce mRNA molecules with sequences that differ from those coded genetically.
2007-07-29 GO:0016547 RNA editing Deleted DEFINITION The insertion, deletion or substitution of nucleotides within nascent RNA transcripts to produce RNA molecules with sequences that differ from those coded genetically.
2007-07-29 GO:0016548 rRNA editing Deleted DEFINITION The insertion, deletion or substitution of nucleotides within nascent rRNA transcripts to produce rRNA molecules with sequences that differ from those coded genetically.
2007-07-29 GO:0016549 tRNA editing Deleted DEFINITION The chemical modification of nucleotides within the primary transcript of transfer RNA (tRNA), necessary to form a mature tRNA.
2007-07-29 GO:0000473 maturation of LSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA) Added DEFINITION Any process involved in the maturation of a precursor Large SubUnit (LSU) ribosomal RNA (rRNA) molecule into a mature LSU-rRNA molecule from the pre-rRNA molecule originally produced as a tetracistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, 5.8 S rRNA, 2S rRNA, and Large Subunit (LSU) in that order from 5' to 3' along the primary transcript.
2007-07-29 GO:0000488 maturation of LSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) Added DEFINITION Any process involved in the maturation of a precursor Large SubUnit (LSU) ribosomal RNA (rRNA) molecule into a mature LSU-rRNA molecule from the pre-rRNA molecule originally produced as a tetracistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, Large Subunit (LSU) the 4.5S rRNA, and the 5S rRNA in that order from 5' to 3' along the primary transcript.
2007-07-29 GO:0000463 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) Added DEFINITION Any process involved in the maturation of a precursor Large SubUnit (LSU) ribosomal RNA (rRNA) molecule into a mature LSU-rRNA molecule.
2007-07-29 GO:0002108 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA,5S) Added DEFINITION Any process involved in the maturation of a precursor Large SubUnit (LSU) ribosomal RNA (rRNA) molecule into a mature LSU-rRNA molecule from the pre-rRNA molecule originally produced as a tricistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, Large Subunit (LSU) the 5S rRNA in that order from 5' to 3' along the primary transcript.
2007-07-29 GO:0000474 maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA) Added DEFINITION Any process involved in the maturation of a precursor Small SubUnit (SSU) ribosomal RNA (rRNA) molecule into a mature SSU-rRNA molecule from the pre-rRNA molecule originally produced as a tetracistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, 5.8 S rRNA, 2S rRNA, and Large Subunit (LSU) in that order from 5' to 3' along the primary transcript.

Cross-references

Timestamp GO ID GO Term Name Action Category Detail
2007-07-29 GO:0043715 2,3-diketo-5-methylthiopentyl-1-phosphate enolase activity Added XREF MetaCyc:R82-RXN
2007-07-29 GO:0043873 pyruvate-flavodoxin oxidoreductase activity Added XREF MetaCyc:PYFLAVOXRE-RXN
2007-07-29 GO:0043873 pyruvate-flavodoxin oxidoreductase activity Added XREF EC:1.2.7.-
2007-07-29 GO:0043874 acireductone synthase activity Added XREF MetaCyc:3.1.3.77-RXN
2007-07-29 GO:0043874 acireductone synthase activity Added XREF EC:3.1.3.77
2007-07-29 GO:0043875 2-ketobutyrate formate-lyase activity Added XREF MetaCyc:KETOBUTFORMLY-RXN
2007-07-29 GO:0043875 2-ketobutyrate formate-lyase activity Added XREF EC:2.3.1-
2007-07-29 GO:0008980 propionate kinase activity Added XREF EC:2.7.2.15
2007-07-29 GO:0008980 propionate kinase activity Deleted XREF EC:2.7.2.-
2007-07-29 GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity Added XREF MetaCyc:R147-RXN

Other

Timestamp GO ID GO Term Name Action Category Detail
2007-07-29 GO:0016556 mRNA modification Added SECONDARY GO:0006381 (mRNA editing)
2007-07-29 GO:0006364 rRNA processing Added SECONDARY GO:0006365 (35S primary transcript processing)
2007-07-29 GO:0006400 tRNA modification Added SECONDARY GO:0016549 (tRNA editing)
2007-07-29 GO:0009451 RNA modification Added SECONDARY GO:0016547 (RNA editing)
2007-07-29 GO:0000154 rRNA modification Added SECONDARY GO:0016548 (rRNA editing)
spacer
Please send comments, suggestions or bug reports to goa@ebi.ac.uk. Click here for details of how to cite UniProt-GOA and QuickGO.
117ms