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EBIInformation

EBI Meetings


Proteomics Standards Initiative

Meeting 19-20 October 2002


Preliminary Programme


For both working groups, meetings will be in adjacent rooms.

Saturday, Oct. 19, 2002
Morning: Arrival and registration
12.30 Buffet Lunch, EBI
13.30 Welcome
13.45 Presentation of existing databases/data formats/standards
  Alvis Brazma, EBI:
The MGED standardisation process
14.15 Parallel sessions
  Protein-protein interactions:

  • Ioannis Xenarios,
    DIP
  • Jerome Wojcik,
    Hybrigenics S.A.:
    A Platform for the Integration and Analysis of Protein-Protein Interaction Data
  • Chris Hogue,
    BIND
Mass spectrometry:

  • Alexey Nesvizhskii,
    Institute for Systems Biology, Seattle, US:
    Statistical models to estimate the accuracy of protein identifications made by tandem mass spectrometry and database search
  • Arkadiusz Nawrocki, Centre for Proteome Analysis, Odense:
    Proteome analysis using 2 dimensional gel electrophoresis and mass spectrometry
  • Rulin Zhang,
    SynX Pharma, Toronto:
    From Proteomic Patterns to the Identification of Biomarkers in Serum
16.00 Coffee
16.20 Protein-protein interactions:

  • Gianni Cesareni,
    University of Rome:
    MINT
  • Holger Husi,
    Centre for Neurosciences, Edinburgh:
    Development of Proteomic Databases
  • Bernard Jacq,
    University of Marseille
  • Henning Hermjakob,
    EBI:
    The IntAct data model
  • Luisa Montecchi, University of Rome/EBI:
    IntAct controlled vocabularies
Mass spectrometry:

  • Steve Oliver,
    University of Manchester:
    PEDRo: A systematic approach to modelling, capturing and disseminating proteomics data.
17.00 - 19.00 Thematic discussion (in parallel sessions).
Preliminary protein-protein interaction session agenda Preliminary mass spectroscopy session agenda
19.30 Meeting dinner: King's College, Cambridge

Sunday, Oct. 20, 2002
09.00 Definition and sign-up for working groups, working group discussions
11.00 Coffee
11.30 Working groups continue
12.30 Buffet Lunch, EBI
13.30 Working groups continue
15.00 Coffee
15.30 Working group reports, closing remarks, date/time for HUPO congress satellite meeting
16.30 End of meeting



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