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Events: Workshops
EBI Workshops combine lecture-based and hands-on training with discussions, often with the aim of agreeing a list of actions pertinent to a specific project.
EBI seminars (Melbourne, Australia)Seminar 1: Bioinformatics Services at EBI: An Introduction to EBI with a focus on gene expression analysis.
Seminar 2: How the EBI is riding the Tsunami: next generation sequencing.
| Event Category |
Workshops |
| Event Subcategory |
Other |
| Date |
13th Apr 2010 |
| Speaker |
Xose Fernandez EBI |
| Venue |
Peter MacCallum Cancer Centre, Melbourne, Australia |
| Event Type |
Lecture |
| Event Level |
Introductory |
| Host |
Richard Tothill
|
| Target Audience |
Life science reseachers |
| Event Category |
Workshops |
| Event Subcategory |
Other |
| Date |
13th Apr 2010 |
| Speaker |
Xose Fernandez EBI |
| Venue |
Walter and Eliza Hall Institute of Medical Research, Parkville, Australia |
| Event Type |
Lecture |
| Event Level |
Introductory |
| Host |
Gordon K Smyth
|
| Target Audience |
Life science researchers |
| Event Category |
Workshops |
| Event Subcategory |
Other |
| Date |
17th Mar 2010 to 18th Mar 2010 |
| Registration Deadline |
22nd Feb 2010 |
| Web Page |
Click here |
Abstract/
Additional Info |
The training workshop will focus on assisting the researcher to select
the most appropriate underlying protein sequence database on which to
base peptide identifications. The participants will then explore
resources appropriate for adding functional annotation to the
resultant list of proteins. The use of the PRIDE database, both for
data storage but also for data retrieval and reanalysis in the light
of previously existing data, will be looked at. Finally tools for
bringing these, and other, resources together to ease the process of
data analysis will be discussed. Wet-lab biologists with little or no
bioinformatics experience are welcome, in addition to dedicated
computer scientists.
The two-day Perspectives in Clinical Proteomics Conference will be
taking place adjacent to the training workshop, 18 – 19 March 2010 |
| Event Category |
Workshops |
| Event Subcategory |
EBI Industry Programme Workshops |
| Date |
4th Dec 2009 to 4th Dec 2009 |
Abstract/
Additional Info |
The CCDC is most well known for curating the Cambridge Structural Database, the premier repository of experimentally derived small organic and metallo-organic structures. In tandem the CCDC has over the years developed a series of tools that allow life science researchers to use structural information to inform their work. This workshop will illustrate how the Cambridge Structural Database System (pt I) and Relibase+, a tool for searching protein/ligand structures, (pt II) can be of use for the life science modeller or protein crystallographer. Pt II will also be relevant to the bioinformatician.
Topics that will be covered include:
- Validation of protein and ligand structures (experimental or modelled)
- Use of small molecule structural information in drug design.
- A new secondary structure assignment scheme and its use in structure/function studies
- Identification of similar but non-homologous cavities to find off-target effects and new drug design ideas. |
| Venue |
C209-C210 Shared Facilities |
| Event Type |
Short Course |
| Host |
CCDC / PDBe
|
| Event Category |
Workshops |
| Event Subcategory |
EBI Industry Programme Workshops |
| Date |
4th Nov 2009 to 5th Nov 2009 |
| Registration Deadline |
23rd Oct 2009 12:00 |
| Web Page |
Click here |
Abstract/
Additional Info |
This PDBe-organised workshop gives NMR users hands-on experience with NMR software developed as part of several exciting European based projects. All software, services and resources covered in this workshop are free for academia. You will get hands on with NMR software like CS-ROSETTA, HADDOCK, CYANA and TALOS+, accessible via web portals and an overview of the current software provided by the Collaborative Computational Project for NMR (CCPN). |
| Venue |
EMBL-EBI, Hinxton |
| Event Type |
Short Course |
| Event Category |
Workshops |
| Event Subcategory |
EBI Industry Programme Workshops |
| Date |
10th Jun 2009 |
| Web Page |
Click here |
Abstract/
Additional Info |
We would like to invite you to attend a workshop hosted by the European Bioinformatics Institute. The workshop is focussed on genotype resources and the challenges of translating from genotypes to phenotypes and comparison between phenotypes.
The first day is an open meeting with presentations from key opinion leaders and representative of major institutes and initiatives. The presentations will cover genotypic data, genotype databases and comparison with and between phenotypes. |
| Venue |
European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, UK. |
| Event Category |
Workshops |
| Event Subcategory |
EBI Industry Programme Workshops |
| Date |
9th Jun 2009 |
| Web Page |
Click here |
Abstract/
Additional Info |
We would like to invite you to the OBO Foundry and Industry Workshop.The workshop venue is the IT Training Room, European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, UK. |
| Venue |
European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, UK. |
| Event Category |
Workshops |
| Event Subcategory |
EBI Industry Programme Workshops |
| Date |
5th May 2009 to 6th May 2009 |
| Web Page |
Click here |
Abstract/
Additional Info |
We would like to invite you to the EBI Industry Programme workshop on Biological Networks: Reconstruction, Analysis and Modelling, May 5th to 6th 2009 at the European Bioinformatics Institute, Hinxton, Cambridge, on May 5th to 6th 2009. The venue will be the EBI IT Training room. |
| Venue |
European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, UK. |
| Event Category |
Workshops |
| Event Subcategory |
EBI Industry Programme Workshops |
| Date |
30th Mar 2009 to 1st Apr 2009 |
| Web Page |
Click here |
Abstract/
Additional Info |
We would like to invite you to the EBI workshop on Semantic Enrichment of the Scientific Literature which is co-organised and sponsored by the BootStrep project (contact Dietrich Rebholz-Schuhmann, rebholz@ebi.ac.uk) and the EBI Industry Programme (contact Dominic Clark, clark@ebi.ac.uk). |
| Venue |
European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, UK. |
| Event Category |
Workshops |
| Event Subcategory |
EBI Industry Programme Workshops |
| Date |
2nd Feb 2009 to 3rd Feb 2009 |
| Web Page |
Click here |
Abstract/
Additional Info |
The EBI will host The Virtual Physiological Human Project Workshop on the 2nd to 3rd February 2009.
The venue will be the Francis Crick Auditorium at the Wellcome Trust Conference Centre on the 2nd February and the EBI IT Training room on the 3rd February.
This meeting will present efforts by the Virtual Physiological Human (VPH) community, as well as other specialities, to model human structures and their function across different scales. This event also aims to advance the computational unification of anatomy in biological and pharmacological databases, physiological models, radiological images and clinical records.
Updates on key research in academia and industry will discuss the modelling of concepts (e.g. disease ontologies), structures (e.g. protein structure, volumetric data) and processes (e.g. viral mechanisms, blood pressure regulation). Ways to foster the interoperability of such modelling methods will also be explored, together with approaches to improve access to clinical phenotypic data for basic research.
This event sets the stage to establish a community toolkit to achieve model interoperability across the VPH community. In particular, design solutions will be sought for the rigorous representation of human anatomy and the close study of its dynamic change in physiology, its orchestrated alteration in development, and its distortion in disease. |
| Venue |
European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, UK. |
| Event Category |
Workshops |
| Event Subcategory |
EBI Industry Programme Workshops |
| Date |
20th Nov 2008 to 21st Nov 2008 |
| Web Page |
Click here |
Abstract/
Additional Info |
The EBI will host a New Sequencing Technologies And Their Applications In Medecine Workshop on the 20th to 21st November 2008.
The venue will be the EBI IT Training room.
We would like to invite you to attend this workshop focussing on recent developments in genomics. Its aims are to identify how the commercial and academic opportunities afforded by the sequencing revolution can be realised. |
| Venue |
European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, UK. |
| Event Category |
Workshops |
| Event Subcategory |
EBI Industry Programme Workshops |
| Date |
7th Nov 2008 |
Abstract/
Additional Info |
The EBI will host a Druggability Portal Workshop on the 7th November 2008. |
| Venue |
European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, UK. |
| Event Category |
Workshops |
| Event Subcategory |
EBI Industry Programme Workshops |
| Date |
20th Oct 2008 to 21st Oct 2008 |
| Web Page |
Click here |
Abstract/
Additional Info |
The EBI will host a Integration of Genomic Information Related to Crop Diseases and Pests Workshop on the 20th to 21st October 2008. |
| Venue |
European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, UK. |
| Event Category |
Workshops |
| Event Subcategory |
EBI Industry Programme Workshops |
| Date |
30th Sep 2008 to 1st Oct 2008 |
| Web Page |
Click here |
Abstract/
Additional Info |
The EBI will host a Target CV Workshop on the 30 September - 1 October 2008. |
| Venue |
European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, UK. |
| Event Category |
Workshops |
| Event Subcategory |
EBI Industry Programme Workshops |
| Date |
19th Jun 2008 to 20th Jun 2008 |
| Web Page |
Click here |
Abstract/
Additional Info |
Disease ontologies and information: its linkage to genes, gene ontologies and phenotypic information. |
| Venue |
European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, UK. |
| Event Category |
Workshops |
| Event Subcategory |
EBI Industry Programme Workshops |
| Date |
19th May 2008 to 20th May 2008 |
| Web Page |
Click here |
Abstract/
Additional Info |
Chemical Entities of Biological Interest (ChEBI) is a freely available dictionary of molecular entities focused on ‘small’ chemical compounds hosted and maintained by EMBL-EBI. The term ‘molecular entity’ refers to any constitutionally or isotopically distinct atom, molecule, ion, ion pair, radical, radical ion, complex, conformer, etc., identifiable as a separately distinguishable entity. The molecular entities in question are either products of nature or synthetic products used to intervene in the processes of living organisms. |
| Venue |
European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, UK. |
| Event Category |
Workshops |
| Event Subcategory |
EBI Industry Programme Workshops |
| Date |
10th Mar 2008 to 11th Mar 2008 |
| Web Page |
Click here |
Abstract/
Additional Info |
The EBI will host an Industry Workshop ‘an introduction to the EBI's protein 3D structure databases and services’ on Monday 10th and Tuesday 11th March 2008 at Hinxton, Cambridge. The Scientific Coordinators are Kim Henrick, Jawahar Swaminathan, Sameer Velankar and Roman Laskowski (EMBL-EBI). |
| Venue |
European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, UK. |
| Event Category |
Workshops |
| Event Subcategory |
EBI Industry Programme Workshops |
| Date |
4th Feb 2008 to 5th Feb 2008 |
| Web Page |
Click here |
Abstract/
Additional Info |
The EBI will host a Druggability Portal Workshop on the 4-5th February 2008. |
| Venue |
European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, UK. |
| Event Category |
Workshops |
| Event Subcategory |
EBI Industry Programme Workshops |
| Date |
12th Nov 2007 to 14th Nov 2007 |
| Web Page |
Click here |
Abstract/
Additional Info |
The EBI will host a two-day workshop organized by the EBI' s Industry Programme and the BOOTStrep consortium. The initial part of the workshop is dedicated to contributions from academia and is followed on the second day by contributions from and for members of the Industry Programme. The scientific co-ordinator is Dietrich Rebholz-Schuhmann. |
| Venue |
European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, UK. |
| Event Category |
Workshops |
| Event Subcategory |
EBI Industry Programme Workshops |
| Date |
7th Nov 2007 |
| Web Page |
Click here |
Abstract/
Additional Info |
The EBI will host a Druggable Genome Initiative Satellite meeting on the 12th November. |
| Venue |
European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, UK. |
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