http://www.ebi.ac.uk/Information/News/news.html EBI News feed en-gb Wednesday, 10 December 2009 15:51:03 GMT http://www.ebi.ac.uk/Information/images/newsfeed.jpg http://www.ebi.ac.uk/Information/News/news.html http://www.ebi.ac.uk/Information/News/news.html#a_556 The latest release of IPI is now available... more Wednesday, 10 December 2009 15:51:03 GMT http://www.ebi.ac.uk/Information/News/news.html#a_556 http://www.ebi.ac.uk/Information/News/news.html#a_555 IntEnz release 55 and Rhea release 8 are already available. UniProt 15.11 and Reactome 30 have been used for cross-references. IntEnzXML includes now cross references to Rhea reactions. Friday, 04 December 2009 22:21:57 GMT http://www.ebi.ac.uk/Information/News/news.html#a_555 http://www.ebi.ac.uk/Information/News/news.html#a_554 IntAct contains 202,826 binary interactions from 4,174 manually curated publications. All data is also available on the public FTP site. Wednesday, 02 December 2009 15:29:40 GMT http://www.ebi.ac.uk/Information/News/news.html#a_554 http://www.ebi.ac.uk/Information/News/news.html#a_553 The new release of GOA contains UniProt GO v77.0, GOA Human v79.0, GOA Mouse v65.0, GOA Rat v65.0, GOA Arabidopsis v52.0, GOA Zebrafish v52.0, GOA Chicken v49.0, GOA Cow v42.0, GOA PDB v66.0 and GOA Proteome Sets 54.0... more Monday, 30 November 2009 09:13:08 GMT http://www.ebi.ac.uk/Information/News/news.html#a_553 http://www.ebi.ac.uk/Information/News/news.html#a_552 Articles on three resources hosted by EMBL-EBI (PDBe, Ensembl Genomes and Gene Expression Atlas) are highlighted as featured articles in the latest Database issue of Nucleic Acids Research. Featured articles are selected by the journal's Executive Editors based upon their originality, significance and scientific excellence Friday, 20 November 2009 09:13:08 GMT http://www.ebi.ac.uk/Information/News/news.html#a_552 http://www.ebi.ac.uk/Information/News/news.html#a_551 The latest release of IPI is now available... more Friday, 06 November 2009 09:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_551 http://www.ebi.ac.uk/Information/News/news.html#a_550 IntEnz release 54 and Rhea release 7 are already available. UniProt 15.10 and Reactome 30 have been used for cross-references. Thursday, 05 November 2009 11:55:31 GMT http://www.ebi.ac.uk/Information/News/news.html#a_550 http://www.ebi.ac.uk/Information/News/news.html#a_549 We are pleased to announce the release of InterPro 23.1, which contains 19269 entries and 68 new methods, which include new methods from PANTHER, HAMAP and PROSITE and covers 76.5% of UniProt Knowledgebase release 15.10. UniParc (uniparc_match.tar.gz) and UniMES (unimes_match.tar.gz) matches to InterPro methods have been updated and are available from the ftp site. For full details of the release please see the Release Notes. Wednesday, 04 November 2009 17:00:17 GMT http://www.ebi.ac.uk/Information/News/news.html#a_549 http://www.ebi.ac.uk/Information/News/news.html#a_548 IntAct contains 202,419 binary interactions from 4,148 manually curated publications. All data is also available on the public FTP site. Wednesday, 04 November 2009 12:23:08 GMT http://www.ebi.ac.uk/Information/News/news.html#a_548 http://www.ebi.ac.uk/Information/News/news.html#a_547 UniProt Knowledgebase release 15.10 includes Swiss-Prot release 57.10 and TrEMBL release 40.10... more UniProtKB/Swiss-Prot Release 57.10 of 04-Nov-09 contains 512205 sequence entries... more UniProtKB/TrEMBL Release 40.10 of 04-Nov-09 contains 9696103 sequence entries. This represents an increase of 32%... more Tuesday, 03 November 2009 16:25:41 GMT http://www.ebi.ac.uk/Information/News/news.html#a_547 http://www.ebi.ac.uk/Information/News/news.html#a_546 The latest release of IPI is now available... more Friday, 16 October 2009 09:30:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_546 http://www.ebi.ac.uk/Information/News/news.html#a_545 IntAct contains 201,652 binary interactions from 4,119 manually curated publications. All data is also available on the public FTP site. Wednesday, 14 October 2009 09:30:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_545 http://www.ebi.ac.uk/Information/News/news.html#a_544 UniProt Knowledgebase release 15.9 includes Swiss-Prot release 57.9 and TrEMBL release 40.9... more UniProtKB/Swiss-Prot Release 57.9 of 13-Oct-09 contains 510076 sequence entries... more UniProtKB/TrEMBL Release 40.9 of 13-Oct-09 contains 5346359 sequence entries. This represents an increase of 29%... more Tuesday, 13 October 2009 16:30:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_544 http://www.ebi.ac.uk/Information/News/news.html#a_543 IntEnz release 53 and Rhea release 6 are already available. Rhea identifiers can be used now to search IntEnz. UniProt 15.8 and Reactome 30 have been used for cross-references. Friday, 09 October 2009 00:27:16 GMT http://www.ebi.ac.uk/Information/News/news.html#a_543 http://www.ebi.ac.uk/Information/News/news.html#a_542 The new release of GOA contains UniProt GO v76.0, GOA Human v78.0, GOA Mouse v64.0, GOA Rat v64.0, GOA Arabidopsis v51.0, GOA Zebrafish v51.0, GOA Chicken v48.0, GOA Cow v41.0, GOA PDB v67.0 and GOA Proteome Sets 53.0... more Thursday, 08 October 2009 11:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_542 http://www.ebi.ac.uk/Information/News/news.html#a_541 Today sees the launch of Ensembl Plants – a freely available web resource for plant genomics research – by EMBL-EBI, in partnership with the Cold Spring Harbor Laboratory, USA. Ensembl Plants allows researchers worldwide to access and visualise the results of genome-scale experiments in different plant species and will make it easier for scientists to improve the productivity and health of crops... more Thursday, 08 October 2009 09:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_541 http://www.ebi.ac.uk/Information/News/news.html#a_540 Scientists have shown that genetically manipulating a key molecular pathway in mice can mimic the longevity effects of a calorie restricted diet. The research, a collaborative effort that includes researchers at the EMBL-European Bioinformatics Institute, is published today in the journal Science and holds promise for drug treatments for age-related diseases... more Friday, 02 October 2009 09:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_540 http://www.ebi.ac.uk/Information/News/news.html#a_539 Release 59.00 of the RESID Database of Protein Modifications is available by ftp at the EBI or at the NCIFCRF ...more Wednesday, 30 September 2009 09:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_539 http://www.ebi.ac.uk/Information/News/news.html#a_538 The Ensembl project is pleased to announce release 56 of Ensembl ...more Monday, 28 September 2009 11:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_538 http://www.ebi.ac.uk/Information/News/news.html#a_536 IntAct contains 201,094 binary interactions from 4,085 manually curated publications. All data is also available on the public FTP site. Saturday, 26 September 2009 11:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_536 http://www.ebi.ac.uk/Information/News/news.html#a_537 The latest release of IPI is now available ... more Friday, 24 September 2009 15:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_537 http://www.ebi.ac.uk/Information/News/news.html#a_535 We are pleased to announce the release of InterPro 23.0, which contains 19150 entries and 434 new methods, which include new methods from PANTHER, HAMAP and the new releases from PROSITE and SMART, covering 76.4% of UniProt Knowledgebase release 15.8 ... more Wednesday, 22 September 2009 16:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_535 http://www.ebi.ac.uk/Information/News/news.html#a_534 UniProt Knowledgebase release 15.8 includes Swiss-Prot release 57.8 and TrEMBL release 40.8... more UniProtKB/Swiss-Prot Release 57.8 of 22-Sep-09 contains 509019 sequence entries... more UniProtKB/TrEMBL Release 40.8 of 22-Sep-09 contains 9325547 sequence entries. This represents an increase of 26%... more Tuesday, 22 September 2009 16:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_534 http://www.ebi.ac.uk/Information/News/news.html#a_533 The EMBL Nucleotide Sequence Database was frozen to make Release 101 on 26-Aug-2009. The release contains 163,656,234 sequence entries comprising 283,748,816,763 nucleotides ...more Thursday, 10 September 2009 13:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_533 http://www.ebi.ac.uk/Information/News/news.html#a_532 IntAct contains 200,395 binary interactions from 4,064 manually curated publications. All data is also available on the public FTP site Tuesday, 08 September 2009 16:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_532 http://www.ebi.ac.uk/Information/News/news.html#a_531 The latest release of IPI is now available ... more Thursday, 03 September 2009 10:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_531 http://www.ebi.ac.uk/Information/News/news.html#a_530a The new release of GOA contains UniProt GO v75.0, GOA Human v77.0, GOA Mouse v63.0, GOA Rat v63.0, GOA Arabidopsis v50.0, GOA Zebrafish v50.0, GOA Chicken v47.0, GOA Cow v41.0, GOA PDB v66.0 and GOA Proteome Sets 52.0... more Tuesday, 01 September 2009 10:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_530a http://www.ebi.ac.uk/Information/News/news.html#a_530 UniProt Knowledgebase release 15.7 includes Swiss-Prot release 57.7 and TrEMBL release 40.7... more UniProtKB/Swiss-Prot Release 57.7 of 01-Sep-09 contains 497293 sequence entries... more UniProtKB/TrEMBL Release 40.7 of 01-Sep-09 contains 9145906 sequence entries. This represents an increase of 24%... more Tuesday, 01 September 2009 10:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_530 http://www.ebi.ac.uk/Information/News/news.html#a_529 Release 58.02 of the RESID of Protein Modifications is available by ftp at the EBI in the directory or at the NCIFCRF in the directory ...more Friday, 28 August 2009 10:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_529 http://www.ebi.ac.uk/Information/News/news.html#a_528 IntEnz release 52 (http://www.ebi.ac.uk/intenz) is already available. This is the first release of IntEnz as an open source project. UniProt 15.6 has been used for cross-references.Next release (53) is flexibly scheduled for October 1st. Friday, 28 August 2009 10:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_528 http://www.ebi.ac.uk/Information/News/news.html#a_527 IntAct contains 200,056 binary interactions from 4,035 manually curated publications. All data is also available on the public FTP site Thursday, 27 August 2009 10:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_527 http://www.ebi.ac.uk/Information/News/news.html#a_526 ChEBI release 60 contains 18643 entities with 266 of those submitted via the ChEBI submission tool. ChEBI now includes publications referencing its entries. The next ChEBI release will be September 30th 2009. See our entity of the month, Cocaine. All data are also available on the public FTP site Wednesday, 26 August 2009 12:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_526 http://www.ebi.ac.uk/Information/News/news.html#a_525 The UK has made its first substantial commitment to a major emerging pan-European science project with a £10M investment by the Biotechnology and Biological Sciences Research Council (BBSRC). BBSRC has awarded funding to the European Molecular Biology Laboratory’s European Bioinformatics Institute to permit a dramatic increase in the institute’s data storage and handling capacity... more Tuesday, 25 August 2009 10:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_525 http://www.ebi.ac.uk/Information/News/news.html#a_524 EBI researchers and their colleagues in 30 labs worldwide have released a new set of standards for graphically representing biological information. This visual language should make it easier to exchange complex information, so that models are accurate, efficient and readily understandable. The new standard, called the Systems Biology Graphical Notation (SBGN), is published today in Nature Biotechnology... more Fri, 07 August 2009 17:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_524 http://www.ebi.ac.uk/Information/News/news.html#a_523 IntEnz release 51 is already available. UniProt 15.6 has been used for cross-references. Next release (52) is flexibly scheduled for August 27th. Thu, 06 August 2009 17:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_523 http://www.ebi.ac.uk/Information/News/news.html#a_522 IntAct contains 195,719 binary interactions from 4,002 manually curated publications. All data is also available on the public FTP site ...more Wed, 05 August 2009 13:30:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_522 http://www.ebi.ac.uk/Information/News/news.html#a_521 Release 58.01 of the RESID of Protein Modifications is available by ftp at the EBI in the directory or at the NCIFCRF in the directory ...more Mon, 02 August 2009 09:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_521 http://www.ebi.ac.uk/Information/News/news.html#a_520 The new release of GOA contains UniProt GO v74.0, GOA Human v76.0, GOA Mouse v62.0, GOA Rat v62.0, GOA Arabidopsis v49.0, GOA Zebrafish v49.0, GOA Chicken v46.0, GOA Cow v39.0, GOA PDB v65.0 and GOA Proteome Sets 51.0... more Thu, 30 July 2009 16:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_520 http://www.ebi.ac.uk/Information/News/news.html#a_519 The latest release of IPI is now available ... more Thu, 30 July 2009 14:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_519 http://www.ebi.ac.uk/Information/News/news.html#a_518 ChEBI release 59 contains 18414 entities with 202 of those submitted via the ChEBI submission tool. The next ChEBI release will be August 26th 2009. See our entity of the month, Copernicium. All data is also available on the public FTP site. Wed, 29 July 2009 15:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_518 http://www.ebi.ac.uk/Information/News/news.html#a_517 UniProt Knowledgebase release 15.6 includes Swiss-Prot release 57.6 and TrEMBL release 40.6... more UniProtKB/Swiss-Prot Release 57.6 of 28-Jun-09 contains 495880 sequence entries... more UniProtKB/TrEMBL Release 40.5 of 28-Jun-09 ontains 8926016 sequence entries comprising 2886024699 amino acids. 1569144 sequences have been added since release 40, the sequence data of 2860 existing entries has been updated and the annotations of 4516603 entries have been revised. This represents an increase of 21%... more Tue, 28 July 2009 20:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_517 http://www.ebi.ac.uk/Information/News/news.html#a_516 We are pleased to announce the release of InterPro 22.0, which now includes HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes) as a new member database. Release 22.0 contains 18843 entries, with 280 new methods from HAMAP and 135 from PRODOM, covering 76.3% of UniProt Knowledgebase release 15.6. UniParc (uniparc_match.tar.gz) and UniMES (unimes_match.tar.gz) matches to InterPro methods have been updated and are available from the ftp site. For full details of the release please see the Release Notes. Tue, 28 July 2009 12:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_516 http://www.ebi.ac.uk/Information/News/news.html#a_515 IntAct contains 195,553 binary interactions from 3,989 manually curated publications. All data is also available on the public FTP site. Wed, 22 July 2009 11:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_515 http://www.ebi.ac.uk/Information/News/news.html#a_514 InterPro BioMart We are pleased to announce the release of a new BioMart service providing data from InterPro, the database of protein families, domains, regions, repeats and sites ...more Tue, 14 July 2009 00:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_514 http://www.ebi.ac.uk/Information/News/news.html#a_513 The Ensembl project is pleased to announce release 55 of Ensembl ...more Tue, 14 July 2009 10:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_513 http://www.ebi.ac.uk/Information/News/news.html#a_512 IntAct contains 194,978 binary interactions from 3,974 manually curated publications. All data is also available on the public FTP site: ftp://ftp.ebi.ac.uk/pub/databases/intact/2009-07-10/ Tue, 14 July 2009 15:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_512 http://www.ebi.ac.uk/Information/News/news.html#a_511 The latest release of IPI is now available ... more Thu, 09 July 2009 16:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_511 http://www.ebi.ac.uk/Information/News/news.html#a_510 Janet Thornton, Director of EMBL-EBI, has been awarded a Senior Scientist Award by the ISCB Fellows Programme in recognition of her outstanding contributions to the fields of computational biology and bioinformatics. The award was made at the ISMB/ECCB 2009 conference in Stockholm, Sweden ...more Wed, 08 July 2009 11:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_510 http://www.ebi.ac.uk/Information/News/news.html#a_509 UniProt Knowledgebase release 15.5 includes Swiss-Prot release 57.5 and TrEMBL release 40.5... more UniProtKB/Swiss-Prot Release 57.5 of 07-Jul-09 contains 471472 sequence entries... more UniProtKB/TrEMBL Release 40.5 of 07-Jul-09 of UniProtKB/TrEMBL contains 8760751 sequence entries comprising 2828570079 amino acids. 1304179 sequences have been added since release 40, the sequence data of 2480 existing entries has been updated and the annotations of 4382329 entries have been revised. This represents an increase of 16%. ... more Tue, 07 July 2009 16:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_509 http://www.ebi.ac.uk/Information/News/news.html#a_508 The new release of GOA contains UniProt GO v73.0, GOA Human v75.0, GOA Mouse v61.0, GOA Rat v61.0, GOA Arabidopsis v48.0, GOA Zebrafish v48.0, GOA Chicken v45.0, GOA Cow v38.0, GOA PDB v64.0 and GOA Proteome Sets 50.0... more Thu, 02 July 2009 15:30:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_508 http://www.ebi.ac.uk/Information/News/news.html#a_507 Biocatalogue.org - a curated registry of web services for the life sciences - is launched today. Biocatalogue will make it easier for scientists to find bioinformatics services that meet their research needs by providing a single search point. Providers, expert curators and users monitor the catalogue and provide high quality information on each service, including ratings. This type of systematic access has the potential to significantly accelerate the work of biomedical researchers The project has been led by Prof Carole Goble at The University of Manchester and Rodrigo Lopez at EMBL-EBI... more Wed, 01 July 2009 17:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_507 http://www.ebi.ac.uk/Information/News/news.html#a_506 From 1 July 2009, Gerard Kleywegt will lead the Protein Data Bank Europe (PDBe) project. Gerard has served on the PDBe Scientific Advisory Board for the last few years and has been on the wwPDB advisory committee. Gerard will replace Kim Henrick, who has headed the PDBe since 2001... more Tue, 30 June 2009 17:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_506 http://www.ebi.ac.uk/Information/News/news.html#a_505 Release 58.00 of the RESID Database of Protein Modifications is available by ftp at the EBI or at the NCIFCRF. See the release notes for more information on the this release of the RESID Database. Tue, 30 June 2009 09:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_505 http://www.ebi.ac.uk/Information/News/news.html#a_504 IntEnz release 50 is already available. UniProt 15.4 has been used for cross-references. Next release (51) is flexibly scheduled for August 4th. Thu, 25 June 2009 17:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_504 http://www.ebi.ac.uk/Information/News/news.html#a_503 ChEBI release 58 contains 18186 entities with 175 of those submitted via the ChEBI submission tool. The next ChEBI release will be July 29th 2009. See our entity of the month, Capecitabine http://www.ebi.ac.uk/chebi/init.do#Entity All data are also available on the public FTP site: ftp://ftp.ebi.ac.uk/pub/databases/chebi/ Tue, 23 June 2009 11:30:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_503 http://www.ebi.ac.uk/Information/News/news.html#a_502 IntAct contains 194,558 binary interactions from 3,965 manually curated publications. All data is also available on the public FTP site: ftp://ftp.ebi.ac.uk/pub/databases/intact/2009-06-19/ Tue, 23 June 2009 11:30:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_502 http://www.ebi.ac.uk/Information/News/news.html#a_501 The Swedish funding agencies (the Swedish Energy Agency, Fas, Formas, the Swedish Research Council and VINNOVA) have suggested the government to allocate a total of 19 million SEK (1.7 million Euro) over three years to ELIXIR and the Swedish Bioinformatics Infrastructure for Life Sciences (BILS), which would make Sweden the first country to secure long-term funding for ELIXIR. The Swedish government has expressed its intention to substantially increase research funding in several strategic areas, including national infrastructures, and a final decision along these lines is expected during the autumn 2009. Bioinformatics is increasingly important in the interpretation of these data. We are therefore very enthusiastic about this new long-term funding for the BILS bioinformatics infrastructure in Sweden, which works within a European perspective and interacts closely with ELIXIR"... more Tue, 23 June 2009 11:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_501 http://www.ebi.ac.uk/Information/News/news.html#a_500 The latest release of IPI is now available ... more Wed, 17 June 2009 15:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_500 http://www.ebi.ac.uk/Information/News/news.html#a_499 We are pleased to announce the release of InterPro 21.0, containing 18638 entries covering 76.8% of UniProtKB. This release includes 169 new entries with 126 new methods from PRINTS and PRODOM. UniParc (uniparc_match.tar.gz) and UniMES (unimes_match.tar.gz) matches to InterPro methods have been updated and are available from the ftp site. For full details of the release please see the Release Notes. Tue, 16 June 2009 17:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_499 http://www.ebi.ac.uk/Information/News/news.html#a_498 UniProt Knowledgebase release 15.4 includes Swiss-Prot release 57.4 and TrEMBL release 40.4...more * UniProtKB/Swiss-Prot Release 57.4 of 16-Jun-09 contains 470369 sequence entries...more * UniProtKB/TrEMBL Release 40.4 of 16-Jun-09 contains 8594382 sequence entries comprising 2774832018 amino acids. 1128426 sequences have been added since release 40, the sequence data of 2330 existing entries has been updated and the annotations of 4332439 entries have been revised. This represents an increase of 14%... more Tue, 16 June 2009 15:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_498 http://www.ebi.ac.uk/Information/News/news.html#a_497 IntAct contains 193,716 binary interactions from 3,963 manually curated publications. All data is also available on the public FTP site: ftp://ftp.ebi.ac.uk/pub/databases/intact/2009-06-12/ Tue, 16 June 2009 13:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_497 http://www.ebi.ac.uk/Information/News/news.html#a_496 The EMBL Nucleotide Sequence Database was frozen to make Release 100 on 29-May-2009. The release contains 161,580,181 sequence entries comprising 275,798,912,115 nucleotides ...more Mon, 15 June 2009 10:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_496 http://www.ebi.ac.uk/Information/News/news.html#a_495 Today, researchers at EMBL-EBI launch a new database, the Gene Expression Atlas, which allows scientists to search and compare gene expression data at unprecedented detail and scope. Observing how gene expression varies in different cell types, tissues and under disease conditions can help researchers understand gene function and to develop new drugs and therapies...more Mon, 15 June 2009 09:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_495 http://www.ebi.ac.uk/Information/News/news.html#a_494 Release 57.01 of the RESID Database of Protein Modifications is available by ftp at the EBI or at the NCIFCRF. See the release notes for more information on the this release of the RESID Database. Fri, 05 June 2009 09:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_494 http://www.ebi.ac.uk/Information/News/news.html#a_493 IntAct release 102 contains 192,887 binary interactions from 3,944 manually curated publications. All data is also available on the public FTP site. Fri, 05 June 2009 11:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_493 http://www.ebi.ac.uk/Information/News/news.html#a_492 The new release of GOA contains UniProt GO v72.0, GOA Human v74.0, GOA Mouse v60.0, GOA Rat v60.0, GOA Arabidopsis v47.0, GOA Zebrafish v47.0, GOA Chicken v44.0, GOA Cow v37.0, GOA PDB v63.0 and GOA Proteome Sets 49.0... more Wed, 27 May 2009 15:30:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_492 http://www.ebi.ac.uk/Information/News/news.html#a_491 ChEBI Release 57 contains new links to NMRShiftDB. It also contains just under 17,963 manually annotated entries of which 108 entries have been submitted via the ChEBI Submission tool. The next ChEBI Release will be on the 24 June 2009. See our entity of the month, Oseltamivir. All data is also available on the public FTP site: ftp://ftp.ebi.ac.uk/pub/databases/chebi/ Wed, 27 May 2009 10:50:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_491 http://www.ebi.ac.uk/Information/News/news.html#a_489 UniProt Knowledgebase release 15.3 includes Swiss-Prot release 57.3 and TrEMBL release 40.3... more * UniProtKB/Swiss-Prot Release 57.3 of 26-May-09 contains 462764 sequence entries... more * UniProtKB/TrEMBL Release 40.3 of 26-May-09 contains 7916844 sequence entries comprising 2577542687 amino acids. 445798 sequences have been added since release 40, the sequence data of 1362 existing entries has been updated and the annotations of 3670156 entries have been revised. This represents an increase of 6%... more Tue, 26 May 2009 16:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_489 http://www.ebi.ac.uk/Information/News/news.html#a_488 IntAct contains 190,521 binary interactions from 3,934 manually curated publications. All data is also available on the public FTP site: ftp://ftp.ebi.ac.uk/pub/databases/intact/2009-05-15/ Wed, 20 May 2009 12:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_488 http://www.ebi.ac.uk/Information/News/news.html#a_487 We are pleased to announce the release of InterPro 20.0, containing 18469 entries covering 77.0% of UniProtKB. This release includes 10 57 new entries representing 1611 new methods from Pfam, PRODOM, PANTHER and TIGRFAMs. UniParc (uniparc_match.tar.gz) and UniMES (unimes_match.tar.gz) matches to InterPro methods have been updated and are available from the ftp site. For full details of the release please see the Release Notes. Mon, 11 May 2009 17:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_487 http://www.ebi.ac.uk/Information/News/news.html#a_486 IntAct contains 189,994 binary interactions from 3,920 manually curated publications. All data is also available on the public FTP site: ftp://ftp.ebi.ac.uk/pub/databases/intact/2009-05-05 Mon, 11 May 2009 16:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_486 http://www.ebi.ac.uk/Information/News/news.html#a_485 IntEnz release 49 is already available. New in this release: One new subsubclass (EC 1.17.7) in the enzyme classification. Wherever possible, reactions have been mapped to Rhea and their participants to ChEBI. IntEnz available now in BioPAX level 2 format! UniProt 15.2 has been used for cross-references. Mon, 11 May 2009 15:17:01 GMT http://www.ebi.ac.uk/Information/News/news.html#a_485 http://www.ebi.ac.uk/Information/News/news.html#a_484 The Ensembl project is pleased to announce release 54 of Ensembl (http://www.ensembl.org/). Highlights of this release are: New Zv8 zebrafish assembly Comparative alignment text displays for variations and regions Ability to add personal notes to any Gene or Transcript For more information visit: http://www.ensembl.org/info/website/news/index.html Along side this release we are also releasing a new version of the pre site (http://pre.ensembl.org/). This now includes: The GRCh37 human assembly released in February 2009 The callJacc3 marmoset assembly Fri, 08 May 2009 11:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_484 http://www.ebi.ac.uk/Information/News/news.html#a_483 The latest release of IPI is now available... Thu, 07 May 2009 10:38:39 GMT http://www.ebi.ac.uk/Information/News/news.html#a_483 http://www.ebi.ac.uk/Information/News/news.html#a_482 UniProt Knowledgebase release 15.2 includes Swiss-Prot release 57.2 and TrEMBL release 40.2... more * UniProtKB/Swiss-Prot Release 57.2 of 05-May-09 contains 462764 sequence entries, comprising 163773385 amino acids abstracted from 178290 references. 0 sequences have been added since release 57.0, the sequence data of 0 existing entries has been updated and the annotations of 0 entries have been revised... more * UniProtKB/TrEMBL Release 40.2 of 05-May-09 contains 7695149 sequence entries comprising 2506224652 amino acids. 215676 sequences have been added since release 40, the sequence data of 1252 existing entries has been updated and the annotations of 3596189 entries have been revised. This represents an increase of 3%... more Tue, 05 Apr 2009 16:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_482 http://www.ebi.ac.uk/Information/News/news.html#a_481 SDF files are now available with ChEBI Release 56. They can be exported via the Downloads section or the search results page. We also have automatically generated links from IntEnz (www.ebi.ac.uk/intenz/) and Rhea (www.ebi.ac.uk/rhea/). This release contains 17842 annotated compounds with 74 of them new submissions entered via the ChEBI submission tool. The next ChEBI Release will be on the 27 May 2009. See our entity of the month, Ethyl formate: http://www.ebi.ac.uk/chebi/init.do#Entity All data are also available on the public FTP site: ftp://ftp.ebi.ac.uk/pub/databases/chebi/ Wed, 29 Apr 2009 18:33:33 GMT http://www.ebi.ac.uk/Information/News/news.html#a_481 http://www.ebi.ac.uk/Information/News/news.html#a_480 The new release of GOA contains UniProt GO v71.0, GOA Human v73.0, GOA Mouse v59.0, GOA Rat v59.0, GOA Arabidopsis v46.0, GOA Zebrafish v46.0, GOA Chicken v43.0, GOA Cow v36.0, GOA PDB v62.0 and GOA Proteome Sets 48.0 ...more Thu, 24 Apr 2009 15:30:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_480 http://www.ebi.ac.uk/Information/News/news.html#a_479 IntAct contains 189,708 binary interactions from 3,907 manually curated publications. All data is also available on the public FTP site: ftp://ftp.ebi.ac.uk/pub/databases/intact/2009-04-17/ Wed, 22 Apr 2009 11:50:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_479 http://www.ebi.ac.uk/Information/News/news.html#a_478 Today sees the release of Ensembl Genomes, a web-based browser that allows anyone to examine the genomes of much of life on earth. Ensembl Genomes is the new younger sibling of the Ensembl genome browser, which opens up the power of Ensembl to non-vertebrate species - plants, fungi, bacteria, metazoa and protists - for the first time ... more Mon, 20 Apr 2009 11:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_478 http://www.ebi.ac.uk/Information/News/news.html#a_477 The latest release of IPI is now available... Thu, 16 Apr 2009 14:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_477 http://www.ebi.ac.uk/Information/News/news.html#a_476 UniProt Knowledgebase release 15.1 UniProt Knowledgebase release 15.1 includes Swiss-Prot release 57.1 and TrEMBL release 40.1... more UniProtKB/Swiss-Prot Release 57.1 of 14-Apr-09 contains 462764 sequence entries, comprising 163773385 amino acids abstracted from 178290 references. 34128 sequences have been added since release 57.0, the sequence data of 174 existing entries has been updated and the annotations of 27819 entries have been revised... more UniProtKB/TrEMBL Release 40.1 of 14-Apr-2009 contains 7527796 sequence entries comprising 2456091386 amino acids. 38583 sequences have been added since release 40, the sequence data of 41 existing entries has been updated and the annotations of 1125219 entries have been revised... more Tue, 14 Apr 2009 16:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_476 http://www.ebi.ac.uk/Information/News/news.html#a_475 IntAct contains 189,489 binary interactions from 3,893 manually curated publications. All data is also available on the public FTP site: ftp://ftp.ebi.ac.uk/pub/databases/intact/2009-04-03 Tue, 07 Apr 2009 15:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_475 http://www.ebi.ac.uk/Information/News/news.html#a_474 Release 57.00 of the RESID Database of Protein Modifications is available by ftp at the EBI or at the NCIFCRF. See the release notes for more information on the this release of the RESID Database. Tue, 31 Mar 2009 09:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_474 http://www.ebi.ac.uk/Information/News/news.html#a_473 The latest release of IPI is now available... Thu, 26 Mar 2009 11:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_473 http://www.ebi.ac.uk/Information/News/news.html#a_472 UniProt Knowledgebase release 15.0 includes Swiss-Prot release 57.0 and TrEMBL release 40.0... more * UniProtKB/Swiss-Prot Release 57.0 of 24-Mar-09 contains 428'650 sequence entries, comprising 154'416'236 amino acids abstracted from 177'584 references. 36'053 sequences have been added since release 56.0, the sequence data of 2'010 existing entries have been manually updated and the annotations of 368'500 entries have been revised... more * UniProtKB/TrEMBL Release 40.0 of 24-Mar-2009 contains 7'753'442 sequence entries, comprising 2'459'135'421 amino acids. 1'700'878 sequences have been added since release 39.0, the sequence data of 24'829 existing entries has been updated and the annotations of 4'218'268 entries have been revised. This represents an increase of 31%... more Tue, 24 Mar 2009 15:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_472 http://www.ebi.ac.uk/Information/News/news.html#a_471 IntEnz release 48 is already available. Two new entries and two changes in the classification have been included in this release. UniProt 14.9 has been used for cross-references. Fri, 13 Mar 2009 09:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_471 http://www.ebi.ac.uk/Information/News/news.html#a_471 IntEnz release 48 is already available. Two new entries and two changes in the classification have been included in this release. UniProt 14.9 has been used for cross-references. Fri, 13 Mar 2009 09:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_471 http://www.ebi.ac.uk/Information/News/news.html#a_470 The new release of GOA contains UniProt GO v70.0, GOA Human v72.0, GOA Mouse v58.0, GOA Rat v58.0, GOA Arabidopsis v45.0, GOA Zebrafish v45.0, GOA Chicken v42.0, GOA Cow v35.0, GOA PDB v61.0 and GOA Proteome Sets 47.0... more Tue, 10 Mar 2009 14:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_470 http://www.ebi.ac.uk/Information/News/news.html#a_469 IntAct contains 189,082 binary interactions from 3,865 manually curated publications. All data is also available on the public FTP site: ftp://ftp.ebi.ac.uk/pub/databases/intact/2009-03-06 Tue, 10 Mar 2009 11:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_469 http://www.ebi.ac.uk/Information/News/news.html#a_468 By incorporating publicly available genomic data sets and analysing over 1,000 transcription factors, Juanma Vaquerizas, a researcher in the Luscombe group at EMBL-EBI and his colleagues have provided new understanding of how transcription factors in humans might operate. The study is published online in advance of publication in Nature Reviews Genetics. Tue, 10 Mar 2009 09:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_468 http://www.ebi.ac.uk/Information/News/news.html#a_467 The EMBL Nucleotide Sequence Database was frozen to make Release 99 on 26-FEB-2009. The release contains 158,001,051 sequence entries comprising 270,341,262,540 nucleotides ...more Mon, 03 Mar 2009 09:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_467 http://www.ebi.ac.uk/Information/News/news.html#a_466 The latest release of IPI is now available... Tue, 03 Mar 2009 16:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_466 http://www.ebi.ac.uk/Information/News/news.html#a_465 UniProt Release 14.9 consists of UniProtKB/Swiss-Prot Protein Knowledgebase Release 56.9 and UniProtKB/TrEMBL Protein Database Release 39.9... more Tue, 03 Mar 2009 16:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_465 http://www.ebi.ac.uk/Information/News/news.html#a_464 Release 56.9 of UniProtKB/Swiss-Prot contains 412525 entries... more Tue, 03 Mar 2009 16:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_464 http://www.ebi.ac.uk/Information/News/news.html#a_463 Release 39.9 of UniProtKB/TrEMBL contains 7341751 sequence entries, this represents an increase of 26%... more Tue, 03 Mar 2009 16:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_463 http://www.ebi.ac.uk/Information/News/news.html#a_462 IntAct contains 188,838 binary interactions from 3,838 manually curated publications. All data is also available on the public FTP site: ftp://ftp.ebi.ac.uk/pub/databases/intact/2009-02-20. Tue, 24 Feb 2009 17:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_462 http://www.ebi.ac.uk/Information/News/news.html#a_461 The new release of GOA contains UniProt GO v69.0, GOA Human v71.0, GOA Mouse v57.0, GOA Rat v57.0, GOA Arabidopsis v44.0, GOA Zebrafish v44.0, GOA Chicken v41.0, GOA Cow v34.0, GOA PDB v60.0 and GOA Proteome Sets 46.0... more Tue, 24 Feb 2009 16:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_461 http://www.ebi.ac.uk/Information/News/news.html#a_460 The latest release of IPI is now available... Fri, 13 Feb 2009 09:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_460 http://www.ebi.ac.uk/Information/News/news.html#a_459 IntAct contains 188,292 binary interactions from 3,812 manually curated publications. All data is also available on the public FTP site: ftp://ftp.ebi.ac.uk/pub/databases/intact/2009-02-06. Wed, 11 Feb 2009 11:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_459 http://www.ebi.ac.uk/Information/News/news.html#a_458 UniProt Release 14.8 consists of UniProtKB/Swiss-Prot Protein Knowledgebase Release 56.8 and UniProtKB/TrEMBL Protein Database Release 39.8... more Tue, 10 Feb 2009 17:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_458 http://www.ebi.ac.uk/Information/News/news.html#a_457 Release 56.8 of UniProtKB/Swiss-Prot contains 410518 entries... more Tue, 10 Feb 2009 17:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_457 http://www.ebi.ac.uk/Information/News/news.html#a_456 Release 39.8 of UniProtKB/TrEMBL contains 7157600 sequence entries, this represents an increase of 22%... more Tue, 10 Feb 2009 17:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_456 http://www.ebi.ac.uk/Information/News/news.html#a_455 Release 56.01 of the RESID Database of Protein Modifications is available by ftp at the EBI or at the NCIFCRF. See the release notes for more information on the this release of the RESID Database. Mon, 02 Feb 2009 09:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_455 http://www.ebi.ac.uk/Information/News/news.html#a_454 We are pleased to announce the release of InterPro 19.0, it contains 17412 entries covering 76.2% of UniProtKB with new methods from Pfam, PANTHER, Gene3D and SUPEFAMILY. UniParc (uniparc_match.tar.gz) and UniMES (unimes_match.tar.gz) matches to InterPro methods have been updated and are available from the ftp site. For full details of the release please see the Release Notes. Thu, 29 Jan 2009 16:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_454 http://www.ebi.ac.uk/Information/News/news.html#a_453 IntAct contains 187,839 binary interactions from 3,791 manually curated publications. All data is also available on the public FTP site: ftp://ftp.ebi.ac.uk/pub/databases/intact/2009-01-23. Thu, 29 Jan 2009 13:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_453 http://www.ebi.ac.uk/Information/News/news.html#a_452 IntEnz release 47 (http://www.ebi.ac.uk/intenz) is already available. * XML files updated to make better use of the xchars package, for easier querying and formatting using XSLT. * A batch of approved entries and a batch of proposals have been included in this release. * UniProt 14.7 has been used for cross-references. ...more Wed, 28 Jan 2009 22:30:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_452 http://www.ebi.ac.uk/Information/News/news.html#a_451 The EMBL Nucleotide Sequence Database was frozen to make Release 98 on 12-JAN-2009. The release contains 155,114,144 sequence entries comprising 265,307,725,081 nucleotides ...more Mon, 26 Jan 2009 11:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_451 http://www.ebi.ac.uk/Information/News/news.html#a_450 A genome wide study of transcription in yeast has redefined the concept of promoters. Researchers in the groups of Lars Steinmetz at EMBL in Heidelberg, Germany, and Wolfgang Huber at EMBL-EBI in Hinxton, UK, have unravelled how yeast generates its transcripts and have come a step closer to understanding their function. The study is published online in the current issue of Nature... more Mon, 26 Jan 2009 09:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_450 http://www.ebi.ac.uk/Information/News/news.html#a_449 The new release of GOA contains UniProt GO v68.0, GOA Human v70.0, GOA Mouse v56.0, GOA Rat v56.0, GOA Arabidopsis v43.0, GOA Zebrafish v43.0, GOA Chicken v40.0, GOA Cow v33.0, GOA PDB v59.0 and GOA Proteome Sets 45.0... more Thu, 22 Jan 2009 14:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_449 http://www.ebi.ac.uk/Information/News/news.html#a_448 IntAct contains 187,118 binary interactions from 3,758 manually curated publications. All data is also available on the public FTP site: ftp://ftp.ebi.ac.uk/pub/databases/intact/2009-01-16. Wed, 21 Jan 2009 11:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_448 http://www.ebi.ac.uk/Information/News/news.html#a_447 UniProt Release 14.7 consists of UniProtKB/Swiss-Prot Protein Knowledgebase Release 56.7 and UniProtKB/TrEMBL Protein Database Release 39.7... more Tue, 20 Jan 2009 17:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_447 http://www.ebi.ac.uk/Information/News/news.html#a_446 Release 56.7 of UniProtKB/Swiss-Prot contains 408099 entries... more Tue, 20 Jan 2009 17:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_446 http://www.ebi.ac.uk/Information/News/news.html#a_445 Release 39.7 of UniProtKB/TrEMBL contains 7001017 sequence entries, this represents an increase of 18%... more Tue, 20 Jan 2009 17:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_445 http://www.ebi.ac.uk/Information/News/news.html#a_444 The latest release of IPI is now available... Tue, 20 Jan 2009 11:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_444 http://www.ebi.ac.uk/Information/News/news.html#a_443 IntAct contains 186,848 binary interactions from 3,749 manually curated publications. All data is also available on the public FTP site: ftp://ftp.ebi.ac.uk/pub/databases/intact/2009-01-09. Tue, 13 Jan 2009 17:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_443 http://www.ebi.ac.uk/Information/News/news.html#a_442 Release 56.00 of the RESID Database of Protein Modifications is available by ftp at the EBI or at the NCIFCRF. See the release notes for more information on the this release of the RESID Database. Thu, 07 Jan 2009 09:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_442 http://www.ebi.ac.uk/Information/News/news.html#a_441 IntAct contains 185,969 binary interactions from 3,709 manually curated publications. All data is also available on the public FTP site: ftp://ftp.ebi.ac.uk/pub/databases/intact/2008-12-12. Thu, 18 Dec 2008 12:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_441 http://www.ebi.ac.uk/Information/News/news.html#a_440 The latest release of IPI is now available... Thu, 18 Dec 2008 10:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_440 http://www.ebi.ac.uk/Information/News/news.html#a_439 Release 52 contains 16,618 annotated entities. See our entity of the month, Epicocconone. All data is also available on the public FTP site: ftp://ftp.ebi.ac.uk/pub/databases/chebi/. Wed, 17 Dec 2008 18:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_439 http://www.ebi.ac.uk/Information/News/news.html#a_438 UniProt Release 14.6 consists of UniProtKB/Swiss-Prot Protein Knowledgebase Release 56.6 and UniProtKB/TrEMBL Protein Database Release 39.6... more Tue, 16 Dec 2008 16:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_438 http://www.ebi.ac.uk/Information/News/news.html#a_437 Release 56.6 of UniProtKB/Swiss-Prot contains 405506 entries... more Tue, 16 Dec 2008 16:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_437 http://www.ebi.ac.uk/Information/News/news.html#a_436 Release 39.6 of UniProtKB/TrEMBL contains 6964485 sequence entries, this represents an increase of 18%... more Tue, 16 Dec 2008 16:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_436 http://www.ebi.ac.uk/Information/News/news.html#a_435 The new release of GOA contains UniProt GO v67.0, GOA Human v69.0, GOA Mouse v55.0, GOA Rat v55.0, GOA Arabidopsis v42.0, GOA Zebrafish v42.0, GOA Chicken v39.0, GOA Cow v32.0, GOA PDB v58.0 and GOA Proteome Sets 44.0... more Mon, 15 Dec 2008 15:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_435 http://www.ebi.ac.uk/Information/News/news.html#a_434 IntEnz release 46 is already available. UniProt 14.5 has been used for cross-references. Thu, 11 Dec 2008 09:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_434 http://www.ebi.ac.uk/Information/News/news.html#a_433 The EMBL Nucleotide Sequence Database was frozen to make Release 97 on 28-NOV-2008. The release contains 150,911,591 sequence entries comprising 259,647,155,718 nucleotides ...more Tue, 09 Dec 2008 14:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_433 http://www.ebi.ac.uk/Information/News/news.html#a_432 Release 55.02 of the RESID Database of Protein Modifications is available by ftp at the EBI or at the NCIFCRF. See the release notes for more information on the this release of the RESID Database. Mon, 08 Dec 2008 09:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_432 http://www.ebi.ac.uk/Information/News/news.html#a_431 Release 51 now includes the "has part" relationship in the ChEBI ontology. ChEBI contains 16,462 entities. See our entity of the month, Irgarol 1051 http://www.ebi.ac.uk/chebi/init.do#Entity. All data is also available on the public FTP site: ftp://ftp.ebi.ac.uk/pub/databases/chebi/. Wed, 26 Nov 2008 17:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_431 http://www.ebi.ac.uk/Information/News/news.html#a_430 UniProt Release 14.5 consists of UniProtKB/Swiss-Prot Protein Knowledgebase Release 56.5 and UniProtKB/TrEMBL Protein Database Release 39.5... more Wed, 26 Nov 2008 17:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_430 http://www.ebi.ac.uk/Information/News/news.html#a_429 Release 56.5 of UniProtKB/Swiss-Prot contains 402482 entries... more Wed, 26 Nov 2008 17:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_429 http://www.ebi.ac.uk/Information/News/news.html#a_428 Release 39.5 of UniProtKB/TrEMBL contains 5395414 sequence entries, this represents an increase of 23%... more Wed, 26 Nov 2008 17:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_428 http://www.ebi.ac.uk/Information/News/news.html#a_427 The Ensembl team are very happy to announce release 51. See our website for details. Thu, 20 Nov 2008 12:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_427 http://www.ebi.ac.uk/Information/News/news.html#a_426 IntEnz release 45 is already available. UniProt 14.4 has been used for cross-references ... more Thu, 06 Nov 2008 14:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_426 http://www.ebi.ac.uk/Information/News/news.html#a_425 The latest release of IPI is now available... more Thu, 06 Nov 2008 09:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_425 http://www.ebi.ac.uk/Information/News/news.html#a_424 UniProt Release 14.4 consists of UniProtKB/Swiss-Prot Protein Knowledgebase Release 56.4 and UniProtKB/TrEMBL Protein Database Release 39.4... more Tue, 04 Nov 2008 17:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_424 http://www.ebi.ac.uk/Information/News/news.html#a_423 Release 56.4 of UniProtKB/Swiss-Prot contains 400771 entries... more Tue, 04 Nov 2008 17:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_423 http://www.ebi.ac.uk/Information/News/news.html#a_422 Release 39.4 of UniProtKB/TrEMBL contains 6697103 sequence entries, this represents an increase of 12%... more Tue, 04 Nov 2008 17:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_422 http://www.ebi.ac.uk/Information/News/news.html#a_421 In an article published in Genome Research, scientists from the EMBL-European Bioinformatics Institute have uncovered how metabolic protein production is regulated in the model bacterium E.coli, and how similar proteins have evolved in other bacteria. The ability to modify the metabolic system is important for bacteria to be able to respond to changes in nutrient availability... more Tue, 03 Nov 2008 14:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_421 http://www.ebi.ac.uk/Information/News/news.html#a_420 ChEBI Release 50 has been released with a new ontology changes including the 'has role' relationship and a new upper level term 'role'. A new source has WHO MedNet has been added for INN name terminology. ChEBI contains 16,173 entities and the next ChEBI release is expected on the 26th November 2008. A new relationship 'has part' will be introduced in the next release. For more information on ontology changes, please read http://chebi.wiki.sourceforge.net/Remediation+initial+phase. See our entity of the month, PP121 http://www.ebi.ac.uk/chebi/init.do#Entity All data are also available on the public FTP site:ftp://ftp.ebi.ac.uk/pub/databases/chebi/ Thu, 30 Oct 2008 12:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_420 http://www.ebi.ac.uk/Information/News/news.html#a_419 Release 55.01 of the RESID Database of Protein Modifications is available by ftp at the EBI or at the NCIFCRF ... more Fri, 24 Oct 2008 17:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_419 http://www.ebi.ac.uk/Information/News/news.html#a_418 The INSDC Feature Table Definition document has been updated, incorporating a number of improvements. Feature key and qualifier definitions can be browsed at http://www.ebi.ac.uk/embl/WebFeat/ and the full document is available at http://www.ebi.ac.uk/embl/Documentation/FT_definitions/feature_table.html Fri, 17 Oct 2008 15:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_418 http://www.ebi.ac.uk/Information/News/news.html#a_417 The new release of GOA contains UniProt GO v66.0, GOA Human v68.0, GOA Mouse v54.0, GOA Rat v54.0, GOA Arabidopsis v41.0, GOA Zebrafish v41.0, GOA Chicken v38.0, GOA Cow v31.0, GOA PDB v57.0 and GOA Proteome Sets 43.0... more Fri, 17 Oct 2008 13:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_417 http://www.ebi.ac.uk/Information/News/news.html#a_416 UniProt Release 14.3 consists of UniProtKB/Swiss-Prot Protein Knowledgebase Release 56.3 and UniProtKB/TrEMBL Protein Database Release 39.3... more Tue, 14 Oct 2008 17:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_416 http://www.ebi.ac.uk/Information/News/news.html#a_415 Release 56.3 of UniProtKB/Swiss-Prot contains 399749 entries... more Tue, 14 Oct 2008 17:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_415 http://www.ebi.ac.uk/Information/News/news.html#a_414 Release 39.3 of UniProtKB/TrEMBL contains 6627982 sequence entries, this represents an increase of 11%... more Tue, 14 Oct 2008 17:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_414 http://www.ebi.ac.uk/Information/News/news.html#a_413 Release 55.00 of the RESID Database of Protein Modifications is available by ftp at the EBI or at the NCIFCRF ... more Wed, 01 Oct 2008 09:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_413 http://www.ebi.ac.uk/Information/News/news.html#a_412 IntEnz release 44 is already available, with a total of 4855 EC numbers. UniProt 14.1 has been used for cross-references.Next release (45) is flexibly scheduled for October 30th... more Fri, 26 Sep 2008 11:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_412 http://www.ebi.ac.uk/Information/News/news.html#a_411 The latest release of IPI is now available... more Fri, 26 Sep 2008 11:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_411 http://www.ebi.ac.uk/Information/News/news.html#a_410 UniProt Release 14.2 consists of UniProtKB/Swiss-Prot Protein Knowledgebase Release 56.2 and UniProtKB/TrEMBL Protein Database Release 39.1... more Tue, 23 Sep 2008 17:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_410 http://www.ebi.ac.uk/Information/News/news.html#a_409 Release 56.2 of UniProtKB/Swiss-Prot contains 398181 entries... more Tue, 23 Sep 2008 17:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_409 http://www.ebi.ac.uk/Information/News/news.html#a_408 Release 39.2 of UniProtKB/TrEMBL contains 6534543 sequence entries, this represents an increase of 9%... more Tue, 23 Sep 2008 17:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_408 http://www.ebi.ac.uk/Information/News/news.html#a_407 The new release of GOA contains UniProt GO v65.0, GOA Human v67.0, GOA Mouse v53.0, GOA Rat v53.0, GOA Arabidopsis v40.0, GOA Zebrafish v40.0, GOA Chicken v37.0, GOA Cow v30.0, GOA PDB v56.0 and GOA Proteome Sets 42.0... more Thu, 18 Sep 2008 16:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_407 http://www.ebi.ac.uk/Information/News/news.html#a_406 Sign up and win an iPod Touch!... more Wed, 17 Sep 2008 14:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_406 http://www.ebi.ac.uk/Information/News/news.html#a_405 Life sciences website UK PubMed Central is entering a phase of development to provide free global access to findings of UK life sciences. The British Library, the University of Manchester and the EMBL-EBI will be involved in adding new features to aid the UK's biomedical and health science researchers ...more Tue, 16 Sep 2008 17:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_405 http://www.ebi.ac.uk/Information/News/news.html#a_404 The EMBL Nucleotide Sequence Database was frozen to make Release 96 on 28-AUG-2008. The release contains 137,951,674 sequence entries comprising 235,135,312,382 nucleotides ...more Mon, 08 Sep 2008 09:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_404 http://www.ebi.ac.uk/Information/News/news.html#a_403 Announcing ChEBI Release 48 with 15,548 annotated entities in its database. The next ChEBI Release is scheduled for 24 September 2008. See our entity of the month, Putrebactin http://www.ebi.ac.uk/chebi/init.do#Entity All data are also available on the public FTP site: ftp://ftp.ebi.ac.uk/pub/databases/chebi/ Wed, 03 Sep 2008 14:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_403 http://www.ebi.ac.uk/Information/News/news.html#a_402 UniProt Release 14.1 consists of UniProtKB/Swiss-Prot Protein Knowledgebase Release 56.1 and UniProtKB/TrEMBL Protein Database Release 39.1... more Tue, 02 Sep 2008 17:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_402 http://www.ebi.ac.uk/Information/News/news.html#a_401 Release 56.1 of UniProtKB/Swiss-Prot contains 397539 entries... more Tue, 02 Sep 2008 17:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_401 http://www.ebi.ac.uk/Information/News/news.html#a_400 Release 39.1 of UniProtKB/TrEMBL contains 6212793 sequence entries, this represents an increase of 3%... more Tue, 02 Sep 2008 17:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_400 http://www.ebi.ac.uk/Information/News/news.html#a_399 The latest release of IPI is now available... more Tue, 02 Sep 2008 14:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_399 http://www.ebi.ac.uk/Information/News/news.html#a_398 InterPro release 18.0 is out. This release includes: New methods from PROSITE, GENE3D and SUPERFAMILY. PROSITE pattern matches are now evaluated to either TRUE (T) or UNKOWN (?) using miniprofiles or associated existing PROSITE profiles. Please see User Manual for details. Match_complete.xml (UniProtKB) now contains all UniProtKB proteins including those not matching an InterPro signature. For full details of the release please see the Release Notes. Mon, 01 Sep 2008 17:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_398 http://www.ebi.ac.uk/Information/News/news.html#a_397 Release 54.02 of the RESID Database of Protein Modifications is available by ftp at the EBI or at the NCIFCRF ... more Fri, 29 Aug 2008 15:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_397 http://www.ebi.ac.uk/Information/News/news.html#a_396 We are pleased to announce the specification of Process Diagrams of the Systems Biology Graphical Notation (SBGN). The goal of SBGN is to standardise the graphical representation of essential biochemical and cellular processes. Standardising graphical notations for describing biological interactions is an important step towards the efficient communication of biological knowledge between different communities. More information on SBGN and SBGN Process Diagram Level 1 can be found here Sat, 23 Aug 2008 15:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_396 http://www.ebi.ac.uk/Information/News/news.html#a_395 IntEnz release 43 is already available. UniProt 14.0 has been used for cross-references. 13 proposed changes in the enzyme classification have been approved in this last release ... more Wed, 20 Aug 2008 16:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_395 http://www.ebi.ac.uk/Information/News/news.html#a_394 Release 54.01 of the RESID Database of Protein Modifications is available by ftp at the EBI or at the NCIFCRF ... more Tue, 12 Aug 2008 10:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_394 http://www.ebi.ac.uk/Information/News/news.html#a_393 More than 20 standardisation groups, led by scientists at the EMBL-EBI and the Centre for Ecology and Hydrology (CEH), have combined forces to form the "Minimum Information about a Biomedical or Biological Investigation" (MIBBI) initiative. Their aim is to harmonise standards for high-throughput biology, and their methodology is published today in Nature Biotechnology... more | paper Thu, 07 Aug 2008 19:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_393 http://www.ebi.ac.uk/Information/News/news.html#a_392 Our capacity to learn and remember is controlled by the fine tuning of intracellular calcium signalling in our brains. In an article published in the journal PNAS, scientists at the EBI describe how calmodulin, a small protein enriched in our neurons, measures calcium concentration and regulates synaptic behaviour through the activation of proteins CaMKII and calcineurin... more Fri, 01 Aug 2008 11:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_392 http://www.ebi.ac.uk/Information/News/news.html#a_391 The EBI training team open beta testing of the new E-learning pilot project... more Thu, 31 Jul 2008 11:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_391 http://www.ebi.ac.uk/Information/News/news.html#a_390 Announcing ChEBI Release 47 with 15,367 annotated entities in its database. The next ChEBI Release is scheduled for 3 September 2008. See our entity of the month, 3,3'-diindolylmethane http://www.ebi.ac.uk/chebi/init.do#Entity All data are also available on the public FTP site: ftp://ftp.ebi.ac.uk/pub/databases/chebi/ Wed, 30 Jul 2008 14:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_390 http://www.ebi.ac.uk/Information/News/news.html#a_389 The Ensembl team are very happy to announce release 50. See our website for details of the data updates and changes. We are also working on a new website design which will be ready for testing in August. If you would like to be involved in testing this new site please send your e-mail address to survey@ebi.ac.uk. Mon, 28 Jul 2008 09:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_389 http://www.ebi.ac.uk/Information/News/news.html#a_388 The Wellcome Trust has awarded 4.7 million GBP (5.8 million Euros) to EMBL's European Bioinformatics Institute (EMBL-EBI) to support the transfer of a large collection of information on the properties and activities of drugs and a large set of drug-like small molecules from publicly listed company Galapagos NV to the public domain... more Wed, 23 Jul 2008 07:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_388 http://www.ebi.ac.uk/Information/News/news.html#a_387 The latest release of IPI is now available... more Tue, 22 Jul 2008 17:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_387 http://www.ebi.ac.uk/Information/News/news.html#a_386 UniProt Release 14.0 consists of UniProtKB/Swiss-Prot Protein Knowledgebase Release 56.0 and UniProtKB/TrEMBL Protein Database Release 39.0... more Tue, 22 Jul 2008 17:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_386 http://www.ebi.ac.uk/Information/News/news.html#a_385 Release 56.0 of UniProtKB/Swiss-Prot contains 392667 entries... more Tue, 22 Jul 2008 17:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_385 http://www.ebi.ac.uk/Information/News/news.html#a_384 Release 39.0 of UniProtKB/TrEMBL contains 6070084 sequence entries, this represents an increase of 15%... more Tue, 22 Jul 2008 17:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_384 http://www.ebi.ac.uk/Information/News/news.html#a_383 Launch of secure archive of genetic data at European Bioinformatics Institute...more Mon, 14 Jul 2008 09:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_383 http://www.ebi.ac.uk/Information/News/news.html#a_382 European Bioinformatics Institute receives boost to secure archives of sequencing data...more Mon, 14 Jul 2008 09:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_382 http://www.ebi.ac.uk/Information/News/news.html#a_381 Scientists at EMBL in Heidelberg and the EBI in Hinxton, Cambridge, have generated the most precise map of genetic recombination ever. Genetic recombination leads to offspring with a new genetic make-up and influences the course of evolution. The study, published in the current issue of Nature, has implications for the tracking of disease genes and their inheritance...more Wed, 09 Jul 2008 18:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_381 http://www.ebi.ac.uk/Information/News/news.html#a_380 IntEnz release 42 is already available. UniProt 13.6 has been used for cross-references... more Tue, 08 Jul 2008 16:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_380 http://www.ebi.ac.uk/Information/News/news.html#a_379 The new release of GOA contains UniProt GO v64.0, GOA Human v66.0, GOA Mouse v52.0, GOA Rat v52.0, GOA Arabidopsis v39.0, GOA Zebrafish v39.0, GOA Chicken v36.0, GOA Cow v29.0, GOA PDB v55.0 and GOA Proteome Sets 41.0... more Thu, 03 Jul 2008 00:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_379 http://www.ebi.ac.uk/Information/News/news.html#a_378 The latest release of IPI is now available... more Wed, 02 Jul 2008 11:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_378 http://www.ebi.ac.uk/Information/News/news.html#a_377 Release 54 of the RESID Database of Protein Modifications is available by ftp at the EBI or at the NCIFCRF ... more Wed, 02 Jul 2008 09:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_377 http://www.ebi.ac.uk/Information/News/news.html#a_376 UniProt Release 13.6 consists of UniProtKB/Swiss-Prot Protein Knowledgebase Release 55.6 and UniProtKB/TrEMBL Protein Database Release 38.6... more Tue, 01 Jul 2008 17:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_376 http://www.ebi.ac.uk/Information/News/news.html#a_375 Release 55.6 of UniProtKB/Swiss-Prot contains 390696 entries... more Tue, 01 Jul 2008 17:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_375 http://www.ebi.ac.uk/Information/News/news.html#a_374 Release 38.6 of UniProtKB/TrEMBL contains 3667875 sequence entries, this represents an increase of 14%... more Tue, 01 Jul 2008 17:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_374 http://www.ebi.ac.uk/Information/News/news.html#a_373 ChEBI Release 46 has 15,192 annotated entities in its database. The next ChEBI Release is scheduled for 30 July 2008... more Wed, 25 Jun 2008 16:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_373 http://www.ebi.ac.uk/Information/News/news.html#a_372 A new computational tool developed by EBI researchers allows the most accurate insights into evolution ever... more Thu, 19 Jun 2008 19:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_372 http://www.ebi.ac.uk/Information/News/news.html#a_371 The new release of GOA contains UniProt GO v63.0, GOA Human v65.0, GOA Mouse v51.0, GOA Rat v51.0, GOA Arabidopsis v38.0, GOA Zebrafish v38.0, GOA Chicken v35.0, GOA Cow v28.0, GOA PDB v54.0 and GOA Proteome Sets 40.0... more Wed, 18 Jun 2008 00:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_371 http://www.ebi.ac.uk/Information/News/news.html#a_370 UniProt Release 13.5 consists of UniProtKB/Swiss-Prot Protein Knowledgebase Release 55.5 and UniProtKB/TrEMBL Protein Database Release 38.5... more Tue, 10 Jun 2008 17:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_370 http://www.ebi.ac.uk/Information/News/news.html#a_369 Release 55.5 of UniProtKB/Swiss-Prot contains 389046 entries... more Tue, 10 Jun 2008 17:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_369 http://www.ebi.ac.uk/Information/News/news.html#a_368 Release 38.5 of UniProtKB/TrEMBL contains 4672908 sequence entries, this represents an increase of 23%... more Tue, 10 Jun 2008 17:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_368 http://www.ebi.ac.uk/Information/News/news.html#a_367 The latest release of IPI is now available... more Tue, 10 Jun 2008 17:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_367 http://www.ebi.ac.uk/Information/News/news.html#a_366 The EMBL Nucleotide Sequence Database was frozen to make Release 95 on 29-MAY-2008. The release contains 131,771,254 sequence entries comprising 224,351,474,408 nucleotides ...more Mon, 09 Jun 2008 14:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_366 http://www.ebi.ac.uk/Information/News/news.html#a_365 IntEnz release 41 (http://www.ebi.ac.uk/intenz) is already available. UniProt 13.4 has been used for cross-references. Fri, 06 Jun 2008 09:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_365 http://www.ebi.ac.uk/Information/News/news.html#a_364 Researchers from the European Molecular Biology Laboratory (EMBL) in Heidelberg, Germany, and the EMBL-European Bioinformatics Institute (EMBL-EBI) in Hinxton, UK, have revealed new insights into how sex chromosomes are regulated. An enzyme that binds differently to male and female sex chromosomes helps males to produce the same amount of proteins as females ... more Fri, 30 May 2008 17:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_364 http://www.ebi.ac.uk/Information/News/news.html#a_363 ChEBI Release 45 has reached the milestone of 15000 entities. ChEBI now has 15,061 annotated entities in its database. A new feature is the release of the ChEBI tutorials which provide extensive information on ChEBI... more Wed, 28 May 2008 16:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_363 http://www.ebi.ac.uk/Information/News/news.html#a_362 In a contract signed today, the European Commission has awarded 4.5 million Euro's to the pan-European ELIXIR consortium, coordinated by the EMBL-EBI. The ELIXIR project aims to decide upon the best way to unite Europe's biological data resources into a sustainable, integrative bioinformatics network for the life sciences... more Wed, 28 May 2008 09:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_362 http://www.ebi.ac.uk/Information/News/news.html#a_361 The new release of GOA contains UniProt GO v62.0, GOA Human v64.0, GOA Mouse v50.0, GOA Rat v50.0, GOA Arabidopsis v37.0, GOA Zebrafish v37.0, GOA Chicken v34.0, GOA Cow v27.0, GOA PDB v53.0 and GOA Proteome Sets 39.0... more Tue, 27 May 2008 00:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_361 http://www.ebi.ac.uk/Information/News/news.html#a_359 The latest release of IPI is now available ... more Tue, 20 May 2008 16:10:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_359 http://www.ebi.ac.uk/Information/News/news.html#a_358 UniProt Release 13.3 consists of UniProtKB/Swiss-Prot Protein Knowledgebase Release 55.4 and UniProtKB/TrEMBL Protein Database Release 38.4... more Tue, 20 May 2008 16:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_358 http://www.ebi.ac.uk/Information/News/news.html#a_357 Release 55.3 of UniProtKB/Swiss-Prot contains 385721 sequence entries... more Tue, 20 May 2008 16:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_357 http://www.ebi.ac.uk/Information/News/news.html#a_356 Release 38.3 of UniProtKB/TrEMBL contains 1876321299 sequence entries, this represents an increase of 10%... more Tue, 20 May 2008 16:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_356 http://www.ebi.ac.uk/Information/News/news.html#a_355 The new release of GOA contains UniProt GO v61.0, GOA Human v63.0, GOA Mouse v49.0, GOA Rat v49.0, GOA Arabidopsis v36.0, GOA Zebrafish v36.0, GOA Chicken v33.0, GOA Cow v26.0, GOA PDB v52.0 and GOA Proteome Sets 38.0... more Wed, 07 May 2008 00:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_355 http://www.ebi.ac.uk/Information/News/news.html#a_354 IntEnz release 40 (http://www.ebi.ac.uk/intenz) is already available. UniProt 13.2 has been used for cross-references. Fri, 02 May 2008 15:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_354 http://www.ebi.ac.uk/Information/News/news.html#a_353 The Wellcome Trust Sanger Institute and the EMBL-European Bioinformatics Institute have been rated as the top two most influential research institutions in the UK, according to results published this week. In addition, nine of the top 25 most influential UK researchers work at the Wellcome Trust Genome Campus near Cambridge, home to the two powerhouse institutes...more Thu, 01 May 2008 14:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_353 http://www.ebi.ac.uk/Information/News/news.html#a_352 Announcing ChEBI Release 43 with 14,757 annotated entities. A new feature is the incorporation of synonyms from the NC-IUPHAR Receptor Nomenclature and Drug Classification database. See our entity of the month, 2-deoxy-2-((18)F)fluoro-alpha-D-glucose All data is also available on the public FTP site. Wed, 30 Apr 2008 15:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_352 http://www.ebi.ac.uk/Information/News/news.html#a_351 UniProt Release 13.3 consists of UniProtKB/Swiss-Prot Protein Knowledgebase Release 55.3 and UniProtKB/TrEMBL Protein Database Release 38.3... more Tue, 29 Apr 2008 17:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_351 http://www.ebi.ac.uk/Information/News/news.html#a_350 Release 55.3 of UniProtKB/Swiss-Prot contains 366226 sequence entries... more Tue, 29 Apr 2008 17:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_350 http://www.ebi.ac.uk/Information/News/news.html#a_349 Release 38.3 of UniProtKB/TrEMBL contains 5708298 sequence entries, this represents an increase of 7%... more Tue, 29 Apr 2008 17:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_349 http://www.ebi.ac.uk/Information/News/news.html#a_348 Researchers from EMBL-EBI are among those who co-author seven articles in Nature Genetics as part of the EU funded project "European Rat Tools for Functional Genomics (EURATools)". The articles demonstrate the remarkable advances made in rat genetics since the sequencing of the rat genome four years ago... more Tue, 29 Apr 2008 14:30:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_348 http://www.ebi.ac.uk/Information/News/news.html#a_347 The latest release of IPI is now available ... more Wed, 09 Apr 2008 12:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_347 http://www.ebi.ac.uk/Information/News/news.html#a_346 UniProt Release 13.2 consists of UniProtKB/Swiss-Prot Protein Knowledgebase Release 55.2 and UniProtKB/TrEMBL Protein Database Release 38.2... more Tue, 08 Apr 2008 17:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_346 http://www.ebi.ac.uk/Information/News/news.html#a_345 Release 55.2 of UniProtKB/Swiss-Prot contains 362782 sequence entries... more Tue, 08 Apr 2008 17:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_345 http://www.ebi.ac.uk/Information/News/news.html#a_344 Release 38.2 of UniProtKB/TrEMBL contains 5577054 sequence entries, this represents an increase of 4%... more Tue, 08 Apr 2008 17:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_344 http://www.ebi.ac.uk/Information/News/news.html#a_343 Researchers from the European Molecular Biology Laboratory in Italy, the EMBL-European Bioinformatics Institute, UK, and the Universities of Harvard, USA, and Lund, Sweden, have used genetic engineering to introduce a mutation found in human leukaemia patients into mice. In the current issue of Cancer Cell they report that the mutation causes leukaemia by triggering innate genetic programmes that allow white blood cells to proliferate uncontrollably... more Tue, 08 Apr 2008 00:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_343 http://www.ebi.ac.uk/Information/News/news.html#a_342 The new release of GOA contains UniProt GO v60.0, GOA Human v62.0, GOA Mouse v48.0, GOA Rat v48.0, GOA Arabidopsis v35.0, GOA Zebrafish v35.0, GOA Chicken v32.0, GOA Cow v25.0, GOA PDB v51.0 and GOA Proteome Sets 37.0... more Wed, 02 Apr 2008 00:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_342 http://www.ebi.ac.uk/Information/News/news.html#a_341 IntEnz release 39 (http://www.ebi.ac.uk/intenz) is already available. Read about Carbonate dehydratase in our enzyme spotlight. UniProt 13.1 has been used for cross-references... more Mon, 31 Mar 2008 16:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_341 http://www.ebi.ac.uk/Information/News/news.html#a_340 Release 53 of the RESID Database of Protein Modifications is available by ftp at the EBI or at the NCIFCRF ... more Mon, 31 Mar 2008 16:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_340 http://www.ebi.ac.uk/Information/News/news.html#a_339 Announcing ChEBI Release 43 with 14,400 annotated entities. The next ChEBI Release is scheduled for 30 April 2008. See our entity of the month, (2-trans,6-trans)-farnesol http://www.ebi.ac.uk/chebi/init.do#Entity. All data is also available on the public FTP site: ftp://ftp.ebi.ac.uk/pub/databases/chebi/ ...more Wed, 26 Mar 2008 00:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_339 http://www.ebi.ac.uk/Information/News/news.html#a_338 A collaboration between The Centre for Applied Genomics at The Hospital for Sick Children and the European Molecular Biology Laboratory's European Bioinformatics Institute (EMBL-EBI) will collect, organize and curate genome-wide information, enhancing the translation of genetic information into new diagnostic, prognostic and therapeutic tools for the improved health of children... more Thu, 20 Mar 2008 00:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_338 http://www.ebi.ac.uk/Information/News/news.html#a_337 InterPro release 17.0 is out. This release includes new methods from TIGRFAMs, GENE3D and SUPERFAMILY. New to this release is the introduction of Genome Properties, supplied from TIGRFAMs. For full details of the release please see the Release Notes. Thu, 20 Mar 2008 00:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_337 http://www.ebi.ac.uk/Information/News/news.html#a_336 The latest release of IPI is now available ... more Tue, 18 Mar 2008 00:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_336 http://www.ebi.ac.uk/Information/News/news.html#a_335 We are pleased to announce the new release of Ensembl... more Tue, 18 Mar 2008 00:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_335 http://www.ebi.ac.uk/Information/News/news.html#a_334 UniProt Release 13.1 consists of UniProtKB/Swiss-Prot Protein Knowledgebase Release 55.1 and UniProtKB/TrEMBL Protein Database Release 38.1... more Tue, 18 Mar 2008 17:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_334 http://www.ebi.ac.uk/Information/News/news.html#a_333 Release 55.1 of UniProtKB/Swiss-Prot contains 359942 sequence entries... more Tue, 18 Mar 2008 17:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_333 http://www.ebi.ac.uk/Information/News/news.html#a_332 Release 38.1 of UniProtKB/TrEMBL contains 5443281 sequence entries, this represents an increase of 1%... more Tue, 18 Mar 2008 17:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_332 http://www.ebi.ac.uk/Information/News/news.html#a_331 The EMBL Nucleotide Sequence Database was frozen to make Release 94 on 27-FEB-2008. The release contains 114,475,051 sequence entries comprising 215,540,553,360 nucleotides Mon, 17 Mar 2008 13:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_331 http://www.ebi.ac.uk/Information/News/news.html#a_330 Release 52 of the RESID Database of Protein Modifications is available by ftp at the EBI or at the NCIFCRF ... more Wed, 12 Mar 2008 00:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_330 http://www.ebi.ac.uk/Information/News/news.html#a_329 The new release of GOA contains UniProt GO v59.0, GOA Human v61.0, GOA Mouse v47.0, GOA Rat v47.0, GOA Arabidopsis v34.0, GOA Zebrafish v34.0, GOA Chicken v31.0, GOA Cow v24.0, GOA PDB v50.0 and GOA Proteome Sets 36.0... more Wed, 12 Mar 2008 00:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_329 http://www.ebi.ac.uk/Information/News/news.html#a_328 Announcing ChEBI Release 42 with 14,174 annotated entities. Synonyms may now be found in Spanish in addition to the French, German and Latin languages added in the previous release. The next ChEBI Release is scheduled for 26th March 2008.See our entity of the month, Pseudocoenzyme B12: http://www.ebi.ac.uk/chebi/init.do#Entity All data is available on the public FTP site: ftp://ftp.ebi.ac.uk/pub/databases/chebi/ Thu, 28 Feb 2008 00:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_328 http://www.ebi.ac.uk/Information/News/news.html#a_327 The latest release of IPI is now available ... more Wed, 27 Feb 2008 15:15:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_327 http://www.ebi.ac.uk/Information/News/news.html#a_326 UniProt Release 13.0 consists of UniProtKB/Swiss-Prot Protein Knowledgebase Release 55.0 and UniProtKB/TrEMBL Protein Database Release 38.0... more Tue, 26 Feb 2008 17:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_326 http://www.ebi.ac.uk/Information/News/news.html#a_325 Release 55.0 of UniProtKB/Swiss-Prot contains 349480 sequence entries... more Tue, 26 Feb 2008 17:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_325 http://www.ebi.ac.uk/Information/News/news.html#a_324 Release 38.0 of UniProtKB/TrEMBL contains 5395414 sequence entries, this represents an increase of 23%... more Tue, 26 Feb 2008 17:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_324 http://www.ebi.ac.uk/Information/News/news.html#a_323 IntEnz release 38 is already available. UniProt 12.8 has been used for cross-references. * New in this release: every cofactor is linked to ChEBI.* Learn about blue enzymes in our enzyme spotlight... more Wed, 20 Feb 2008 17:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_323 http://www.ebi.ac.uk/Information/News/news.html#a_322 The new release of GOA contains UniProt GO v58.0, GOA Human v60.0, GOA Mouse v46.0, GOA Rat v46.0, GOA Arabidopsis v33.0, GOA Zebrafish v33.0, GOA Chicken v30.0, GOA Cow v23.0, GOA PDB v49.0 and GOA Proteome Sets 35.0... more Mon, 18 Feb 2008 00:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_322 http://www.ebi.ac.uk/Information/News/news.html#a_321 ASTD Release 1.1 contains improved TSS predictions covering 80% of human genes and 68% of mouse genes and in silico expression analysis. For full details of the release please see the Release Notes Fri, 15 Feb 2008 00:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_321 http://www.ebi.ac.uk/Information/News/news.html#a_320 The latest release of IPI is now available ... more Thu, 07 Feb 2008 00:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_320 http://www.ebi.ac.uk/Information/News/news.html#a_319 UniProt Release 12.8 consists of UniProtKB/Swiss-Prot Protein Knowledgebase Release 54.8 and UniProtKB/TrEMBL Protein Database Release 37.8... more Tue, 05 Feb 2008 00:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_319 http://www.ebi.ac.uk/Information/News/news.html#a_318 Release 54.8 of UniProtKB/Swiss-Prot contains 349480 sequence entries... more Tue, 05 Feb 2008 00:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_318 http://www.ebi.ac.uk/Information/News/news.html#a_317 Release 37.8 of UniProtKB/TrEMBL contains 5329119 sequence entries, this represents an increase of 21%... more Tue, 05 Feb 2008 00:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_317 http://www.ebi.ac.uk/Information/News/news.html#a_316 InterPro release 16.2 is out, it contains 16175 entries covering 76.2% of UniProtKB with new methods from PIRSF, Gene3D and SUPERFAMILY. A new Type, Conserved Site, has been created for PROSITE patterns that do not represent PTMs, Active Sites or Binding Sites. UniProtKB (match_complete.xml), UniParc (uniparc_match.tar.gz) and UniMES (unimes_match.tar.gz) matches to InterPro methods have been updated and are available from the ftp site. For full details of the release please see the Release Notes. Mon, 04 Feb 2008 00:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_316 http://www.ebi.ac.uk/Information/News/news.html#a_315 Announcing ChEBI Release 41 with 13,959 annotated entities. In addition all data is available on the public FTP site... more Wed, 23 Jan 2008 13:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_315 http://www.ebi.ac.uk/Information/News/news.html#a_314 Hinxton, 22 January 2008 The EBI is part of an international research consortium that today announced the 1000 Genomes Project, an ambitious effort to sequence the genomes of at least 1000 people to create the most detailed and medically useful catalogue to date of human genetic variation... more Tue, 22 Jan 2008 13:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_314 http://www.ebi.ac.uk/Information/News/news.html#a_313 The new release of GOA contains UniProt GO v57.0, GOA Human v59.0, GOA Mouse v45.0, GOA Rat v45.0, GOA Arabidopsis v32.0, GOA Zebrafish v32.0, GOA Chicken v29.0, GOA Cow v22.0, GOA PDB v48.0 and GOA Proteome Sets 34.0... more Mon, 21 Jan 2008 00:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_313 http://www.ebi.ac.uk/Information/News/news.html#a_312 The latest release of IPI is now available ... more Wed, 16 Jan 2008 00:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_312 http://www.ebi.ac.uk/Information/News/news.html#a_311 UniProt Release 12.7 consists of UniProtKB/Swiss-Prot Protein Knowledgebase Release 54.7 and UniProtKB/TrEMBL Protein Database Release 37.7... more Tue, 15 Jan 2008 00:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_311 http://www.ebi.ac.uk/Information/News/news.html#a_310 Release 54.7 of UniProtKB/Swiss-Prot contains 333445 sequence entries... more Tue, 15 Jan 2008 00:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_310 http://www.ebi.ac.uk/Information/News/news.html#a_309 Release 37.7 of UniProtKB/TrEMBL contains 5139891 sequence entries, this represents an increase of 16%... more Tue, 15 Jan 2008 00:00:00 GMT http://www.ebi.ac.uk/Information/News/news.html#a_309