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IPI - International Protein Index - Versioning Information

IPI entry identifiers and version numbers


An IPI ID belongs to a master entry from a constituent database, that provides the IPI entry with its sequence and description. As long as that entry remains a master sequence of an IPI entry, that IPI entry will retain the same IPI ID. If a new sequence becomes a master of an IPI entry, that entry will be assigned a new IPI ID.

An exception to this rule will be made where a reference to a former master entry is deleted from IPI, if one of that master's former associated entries becomes a master in its stead. In that case, the new master will inherit its IPI ID from its former master.

The sequence version increases whenever the sequence associated with a particular IPI ID changes (but not necessarily when any other feature associated with the IPI ID (such as the protein description or the composition of the cluster of entries associated with it)).

IPI IDs will be stable, and versioning will be maintained, from version 2.0 onwards. Identifiers and version numbers in IPI v2.0 are not backwards compatible with IPI v1.1.



IPI Release Version Numbers


Overview of the versioning systems numbers used for previous releases of IPI.

Name Dates Comments
Human
IPI.1 February 2001 - August 2001 Prepared in support of initial human genome annotation
Reference Nature 409
IPI HUMAN v2.x September 2001 - October 2004 v2.0 - v2.38 released
IPI HUMAN v3.x November 2004 - present Produced from new code base
Mouse
IPI MOUSE v1.x May 2002 - October 2004 v1.0 - v1.31 released
IPI MOUSE v3.x November 2004 - present Produced from new code base
Rat
IPI RAT v1.x March 2003 - October 2004 v1.0 - v1.21 released
IPI RAT v3.x November 2004 - present Produced from new code base
Zebrafish
IPI BRARE v3.x December 2004 - May 2007 Produced from new code base
IPI DANRE v3.x June 2007 - present Change of OS Name
Arabidopsis
IPI ARATH v3.x January 2005 - present Produced from new code base
Chicken
IPI CHICK v3.x May 2005 - present Produced from new code base
Cow
IPI BOVIN v3.x Jan 2006 - present Produced from new code base













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