Current Composition of Zebrafish GOA



The following table describes the latest version of GOA Zebrafish (version 98), released on 18 September, 2013 and assembled using the publicly released data available in the source databases on 14 September, 2013.


GO Annotation Source Number of Associations Number of Distinct Proteins
Electronic GO annotation using InterPro to GO mapping 49453 24083
Electronic GO annotation using Hamap to GO mapping 202 54
Electronic GO annotation using Swiss-Prot keyword to GO mapping 15376 10107
Electronic GO annotation using UniProt Subcellular Location to GO mapping 3082 2516
Electronic GO annotation using EC to GO mapping 622 576
Electronic GO annotation using Compara projections 5 5
Electronic GO annotation using UniPathway to GO mapping 330 313
Total Electronic GO annotation 69070 27426
Manual GO annotation by UniProt 4222 882
Manual GO annotation by MGI 31 11
Manual GO annotation by BHF-UCL 41 15
Manual GO annotation by HGNC 44 7
Manual GO annotation by ZFIN 14070 4862
Manual GO annotation by IntAct 63 21
Manual GO annotation by RefGenome 2225 337
Inferred manual and electronic annotations based on GOC rules 243 184
Inferred manual annotations based on GOC rules 243 184
Total Manual GO annotations 20939 5704
Total GOA annotations 90009 29121
Number of distinct Pubmed references 2592
Total number of Pubmed references 9676