Current Composition of Pig GOA



The following table describes the latest version of GOA Pig (version 60), released on 07 July, 2016 and assembled using the publicly released data available in the source databases on 02 July, 2016.


GO Annotation Source Number of Associations Number of Distinct Gene Products
Total GOA annotations 156549 21882
Total Electronic GO annotation 118328 20776
Total Manual GO annotations 38221 7844
Manual GO annotation by UniProt 4981 619
Total number of Pubmed references 1198
Number of distinct Pubmed references 286
Electronic GO annotation using InterPro to GO mapping 23647 12332
Electronic GO annotation using Hamap to GO mapping 380 124
Electronic GO annotation using Swiss-Prot keyword to GO mapping 10980 8070
Electronic GO annotation using UniProt Subcellular Location to GO mapping 2885 2539
Electronic GO annotation using EC to GO mapping 582 531
Electronic GO annotation using Compara projections 72906 9589
Electronic GO annotation using UniPathway to GO mapping 183 175
Electronic GO annotation using UniRule to GO mapping 656 437
Logical inferences based on GOC rules and annotations from electronic sources 4235 3473
Manual GO annotation by AgBase 1857 302
Manual GO annotation by MGI 17 14
Manual GO annotation by BHF-UCL 222 78
Manual GO annotation by HGNC 73 13
Manual GO annotation by Reactome 14 5
Manual GO annotation by IntAct 10 7
Manual GO annotation by RefGenome 31029 7202
Manual GO annotation by CACAO 13 7
Manual GO annotation by ParkinsonsUK-UCL 2 1
Manual GO annotation by GO_Central 3 2
Logical inferences based on GOC rules and annotations from manual sources 1874 1737
Logical inferences based on GOC rules and annotations from manual and electronic sources 6109 4300