Current Composition of Chicken GOA
The following table describes the latest version of GOA Chicken (version 95), released on 18 September, 2013 and assembled using the publicly released data available in the source databases on 14 September, 2013.
| GO Annotation Source | Number of Associations | Number of Distinct Proteins |
|---|---|---|
| Electronic GO annotation using InterPro to GO mapping | 20616 | 10123 |
| Electronic GO annotation using Hamap to GO mapping | 120 | 28 |
| Electronic GO annotation using Swiss-Prot keyword to GO mapping | 7344 | 4703 |
| Electronic GO annotation using UniProt Subcellular Location to GO mapping | 2108 | 1682 |
| Electronic GO annotation using EC to GO mapping | 459 | 403 |
| Electronic GO annotation using Compara projections | 24736 | 3923 |
| Electronic GO annotation using UniPathway to GO mapping | 196 | 182 |
| Total Electronic GO annotation | 55579 | 12940 |
| Manual GO annotation by UniProt | 3495 | 628 |
| Manual GO annotation by AgBase | 958 | 190 |
| Manual GO annotation by MGI | 28 | 18 |
| Manual GO annotation by BHF-UCL | 106 | 33 |
| Manual GO annotation by HGNC | 47 | 11 |
| Manual GO annotation by Roslin Institute | 26 | 9 |
| Manual GO annotation by Reactome | 645 | 111 |
| Manual GO annotation by IntAct | 166 | 81 |
| Manual GO annotation by DFLAT | 15 | 8 |
| Manual GO annotation by RefGenome | 1131 | 191 |
| Inferred manual and electronic annotations based on GOC rules | 75 | 64 |
| Inferred manual annotations based on GOC rules | 75 | 64 |
| Total Manual GO annotations | 6692 | 1084 |
| Total GOA annotations | 62271 | 13045 |
| Number of distinct Pubmed references | 403 | |
| Total number of Pubmed references | 1359 |